RNA–Protein interactions for RNA: ENST00000554556.5

GABRB3-206, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-206ENST00000554556 PRKG1Q13976 671 aa28.19■■■□□ 2.1
GABRB3-206ENST00000554556 SPINK5Q9NQ38 1064 aaPredicted RBP28.19■■■□□ 2.1
GABRB3-206ENST00000554556 COL1A1P02452 1464 aaPredicted RBP28.19■■■□□ 2.1
GABRB3-206ENST00000554556 A0A1B0GUL6 1792 aa28.19■■■□□ 2.1
GABRB3-206ENST00000554556 PLIN1O60240 522 aa28.18■■■□□ 2.1
GABRB3-206ENST00000554556 PTPN12Q05209 780 aaKnown RBP28.18■■■□□ 2.1
GABRB3-206ENST00000554556 DEFB129Q9H1M3 183 aa28.18■■■□□ 2.1
GABRB3-206ENST00000554556 ANGEL1Q9UNK9 670 aaKnown RBP28.18■■■□□ 2.1
GABRB3-206ENST00000554556 TBC1D8O95759 1140 aa28.17■■■□□ 2.1
GABRB3-206ENST00000554556 PKN2Q16513 984 aaKnown RBP28.17■■■□□ 2.1
GABRB3-206ENST00000554556 EPHA10Q5JZY3 1008 aa28.17■■■□□ 2.1
GABRB3-206ENST00000554556 SLC4A10Q6U841 1118 aa28.17■■■□□ 2.1
GABRB3-206ENST00000554556 CERS5Q8N5B7 392 aa28.17■■■□□ 2.1
GABRB3-206ENST00000554556 PPP2R3BQ9Y5P8 575 aa28.17■■■□□ 2.1
GABRB3-206ENST00000554556 ECM29Q5VYK3 1845 aa28.16■■■□□ 2.1
GABRB3-206ENST00000554556 MKRN3Q13064 507 aaKnown RBP28.16■■■□□ 2.1
GABRB3-206ENST00000554556 LDLRAD1Q5T700 205 aa28.16■■■□□ 2.1
GABRB3-206ENST00000554556 FAM9BQ8IZU0 186 aa28.16■■■□□ 2.1
GABRB3-206ENST00000554556 ZNF594Q96JF6 807 aaPredicted RBP28.16■■■□□ 2.1
GABRB3-206ENST00000554556 SRCIN1Q9C0H9 1055 aa28.16■■■□□ 2.1
GABRB3-206ENST00000554556 F8W031 263 aaPredicted RBP28.15■■■□□ 2.1
GABRB3-206ENST00000554556 CFAP100Q494V2 611 aa28.15■■■□□ 2.1
GABRB3-206ENST00000554556 PPP1R12BO60237 982 aaPredicted RBP28.14■■■□□ 2.1
GABRB3-206ENST00000554556 NOM1Q5C9Z4 860 aaKnown RBP28.14■■■□□ 2.1
GABRB3-206ENST00000554556 SUPT20HL1Q3ZLR7 823 aa28.13■■■□□ 2.09
GABRB3-206ENST00000554556 ZNF296Q8WUU4 475 aaPredicted RBP28.13■■■□□ 2.09
GABRB3-206ENST00000554556 SLC10A4Q96EP9 437 aa28.13■■■□□ 2.09
GABRB3-206ENST00000554556 UBE4AQ14139 1066 aa28.12■■■□□ 2.09
GABRB3-206ENST00000554556 SPRYD7Q5W111 196 aa28.12■■■□□ 2.09
GABRB3-206ENST00000554556 SPDYE2BA6NHP3 402 aa28.11■■■□□ 2.09
GABRB3-206ENST00000554556 GPR25O00155 361 aa28.11■■■□□ 2.09
GABRB3-206ENST00000554556 SPDYE6P0CI01 402 aa28.11■■■□□ 2.09
GABRB3-206ENST00000554556 RBM5P52756 815 aaKnown RBP eCLIP28.11■■■□□ 2.09
GABRB3-206ENST00000554556 INHBEP58166 350 aa28.11■■■□□ 2.09
GABRB3-206ENST00000554556 MAP3K11Q16584 847 aa28.11■■■□□ 2.09
GABRB3-206ENST00000554556 PRMT6Q96LA8 375 aaPredicted RBP28.11■■■□□ 2.09
GABRB3-206ENST00000554556 UNCXA6NJT0 531 aa28.1■■■□□ 2.09
GABRB3-206ENST00000554556 ALDH1A1P00352 501 aa28.1■■■□□ 2.09
GABRB3-206ENST00000554556 CFHR5Q9BXR6 569 aa28.1■■■□□ 2.09
GABRB3-206ENST00000554556 FAM205AQ6ZU69 1335 aa28.1■■■□□ 2.09
GABRB3-206ENST00000554556 CLRN2A0PK11 232 aa28.09■■■□□ 2.09
GABRB3-206ENST00000554556 MANSC4A6NHS7 340 aaPredicted RBP28.09■■■□□ 2.09
GABRB3-206ENST00000554556 HIBADHP31937 336 aaKnown RBP28.09■■■□□ 2.09
GABRB3-206ENST00000554556 SOX10P56693 466 aa28.09■■■□□ 2.09
GABRB3-206ENST00000554556 VEZTQ9HBM0 779 aa28.09■■■□□ 2.09
GABRB3-206ENST00000554556 JAG2Q9Y219 1238 aa28.09■■■□□ 2.09
GABRB3-206ENST00000554556 PCDHAC2Q9Y5I4 1007 aa28.09■■■□□ 2.09
GABRB3-206ENST00000554556 TDRD7Q8NHU6 1098 aaKnown RBP28.08■■■□□ 2.09
GABRB3-206ENST00000554556 SUCLG2Q96I99 432 aa28.08■■■□□ 2.09
GABRB3-206ENST00000554556 HPS5Q9UPZ3 1129 aa28.08■■■□□ 2.09
GABRB3-206ENST00000554556 FKTNO75072 461 aa28.07■■■□□ 2.08
GABRB3-206ENST00000554556 FZD1Q9UP38 647 aa28.07■■■□□ 2.08
GABRB3-206ENST00000554556 ZBTB48P10074 688 aaPredicted RBP28.06■■■□□ 2.08
GABRB3-206ENST00000554556 MFSD14BQ5SR56 506 aa28.06■■■□□ 2.08
GABRB3-206ENST00000554556 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.06■■■□□ 2.08
GABRB3-206ENST00000554556 GYG1P46976 350 aa28.05■■■□□ 2.08
GABRB3-206ENST00000554556 IREB2P48200 963 aaKnown RBP28.05■■■□□ 2.08
GABRB3-206ENST00000554556 TNFAIP1Q13829 316 aa28.05■■■□□ 2.08
GABRB3-206ENST00000554556 MROH5Q6ZUA9 1318 aa28.05■■■□□ 2.08
GABRB3-206ENST00000554556 UTYO14607 1347 aa28.04■■■□□ 2.08
GABRB3-206ENST00000554556 NBPF7P0C2Y1 421 aaPredicted RBP28.04■■■□□ 2.08
GABRB3-206ENST00000554556 RASA3Q14644 834 aa28.04■■■□□ 2.08
GABRB3-206ENST00000554556 NBPF12Q5TAG4 269 aaPredicted RBP28.04■■■□□ 2.08
GABRB3-206ENST00000554556 KAZALD1Q96I82 304 aa28.04■■■□□ 2.08
GABRB3-206ENST00000554556 WNK4Q96J92 1243 aa28.04■■■□□ 2.08
GABRB3-206ENST00000554556 FAM84BQ96KN1 310 aaPredicted RBP28.04■■■□□ 2.08
GABRB3-206ENST00000554556 PUS3Q9BZE2 481 aaKnown RBP28.04■■■□□ 2.08
GABRB3-206ENST00000554556 SERPINA10Q9UK55 444 aa28.04■■■□□ 2.08
GABRB3-206ENST00000554556 TTF2Q9UNY4 1162 aaKnown RBP28.04■■■□□ 2.08
GABRB3-206ENST00000554556 RIPOR2Q9Y4F9 1068 aa28.04■■■□□ 2.08
GABRB3-206ENST00000554556 FBXO46Q6PJ61 603 aaPredicted RBP28.03■■■□□ 2.08
GABRB3-206ENST00000554556 VPS37DQ86XT2 251 aa28.03■■■□□ 2.08
GABRB3-206ENST00000554556 IFNL1Q8IU54 200 aa28.02■■■□□ 2.08
GABRB3-206ENST00000554556 CLMNQ96JQ2 1002 aa28.02■■■□□ 2.08
GABRB3-206ENST00000554556 USP2O75604 605 aaPredicted RBP28.01■■■□□ 2.07
GABRB3-206ENST00000554556 OTUD7BQ6GQQ9 843 aa28.01■■■□□ 2.07
GABRB3-206ENST00000554556 ANKRD13AQ8IZ07 590 aa28.01■■■□□ 2.07
GABRB3-206ENST00000554556 BICC1Q9H694 974 aaKnown RBP28.01■■■□□ 2.07
GABRB3-206ENST00000554556 ZNF70Q9UC06 446 aaPredicted RBP28.01■■■□□ 2.07
GABRB3-206ENST00000554556 SSC5DA1L4H1 1573 aa28.01■■■□□ 2.07
GABRB3-206ENST00000554556 PTPRCP08575 1304 aa28■■■□□ 2.07
GABRB3-206ENST00000554556 ZNF521Q96K83 1311 aa28■■■□□ 2.07
GABRB3-206ENST00000554556 RABL6Q3YEC7 729 aaPredicted RBP28■■■□□ 2.07
GABRB3-206ENST00000554556 SPDYE2Q495Y8 402 aa28■■■□□ 2.07
GABRB3-206ENST00000554556 CAVIN4Q5BKX8 364 aa28■■■□□ 2.07
GABRB3-206ENST00000554556 MRPL50Q8N5N7 158 aaKnown RBP28■■■□□ 2.07
GABRB3-206ENST00000554556 METTL24Q5JXM2 366 aa27.99■■■□□ 2.07
GABRB3-206ENST00000554556 R3HDMLQ9H3Y0 253 aa27.99■■■□□ 2.07
GABRB3-206ENST00000554556 TDRD3Q9H7E2 651 aaKnown RBP27.99■■■□□ 2.07
GABRB3-206ENST00000554556 AOX1Q06278 1338 aa27.98■■■□□ 2.07
GABRB3-206ENST00000554556 FRAT2O75474 233 aaPredicted RBP27.98■■■□□ 2.07
GABRB3-206ENST00000554556 SLC34A2O95436 690 aa27.98■■■□□ 2.07
GABRB3-206ENST00000554556 TNNI2P48788 182 aa27.98■■■□□ 2.07
GABRB3-206ENST00000554556 FBXO33Q7Z6M2 555 aa27.98■■■□□ 2.07
GABRB3-206ENST00000554556 DZIP1LQ8IYY4 767 aaKnown RBP27.98■■■□□ 2.07
GABRB3-206ENST00000554556 TBC1D22AQ8WUA7 517 aa27.98■■■□□ 2.07
GABRB3-206ENST00000554556 LAMB1P07942 1786 aa27.97■■■□□ 2.07
GABRB3-206ENST00000554556 CRKP46108 304 aa27.97■■■□□ 2.07
GABRB3-206ENST00000554556 ARAP2Q8WZ64 1704 aa27.96■■■□□ 2.07
GABRB3-206ENST00000554556 E9PSI1 815 aa27.95■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms