RNA–Protein interactions for RNA: ENST00000554439.5

PRPF39-207, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,982 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-207ENST00000554439 FZD6O60353 706 aa3.13□□□□□ -1.91
PRPF39-207ENST00000554439 UQCRHP07919 91 aa3.13□□□□□ -1.91
PRPF39-207ENST00000554439 CT47B1P0C2W7 299 aaPredicted RBP3.13□□□□□ -1.91
PRPF39-207ENST00000554439 SH3BP2P78314 561 aa3.13□□□□□ -1.91
PRPF39-207ENST00000554439 CALD1Q05682 793 aaKnown RBP3.13□□□□□ -1.91
PRPF39-207ENST00000554439 FAM26DQ5JW98 314 aa3.13□□□□□ -1.91
PRPF39-207ENST00000554439 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.13□□□□□ -1.91
PRPF39-207ENST00000554439 RNF214Q8ND24 703 aa3.13□□□□□ -1.91
PRPF39-207ENST00000554439 ANP32BQ92688 251 aaKnown RBP3.13□□□□□ -1.91
PRPF39-207ENST00000554439 STK26Q9P289 416 aa3.13□□□□□ -1.91
PRPF39-207ENST00000554439 PRDM4Q9UKN5 801 aa3.13□□□□□ -1.91
PRPF39-207ENST00000554439 ZDHHC9Q9Y397 364 aa3.13□□□□□ -1.91
PRPF39-207ENST00000554439 ZC3H13Q5T200 1668 aaKnown RBP3.13□□□□□ -1.91
PRPF39-207ENST00000554439 MYO3AQ8NEV4 1616 aa3.13□□□□□ -1.91
PRPF39-207ENST00000554439 IFT172Q9UG01 1749 aa3.13□□□□□ -1.91
PRPF39-207ENST00000554439 KIF16BQ96L93 1317 aa3.13□□□□□ -1.91
PRPF39-207ENST00000554439 A0A1W2PRU2 124 aa3.12□□□□□ -1.91
PRPF39-207ENST00000554439 SYCE3A1L190 88 aa3.12□□□□□ -1.91
PRPF39-207ENST00000554439 WASLO00401 505 aaPredicted RBP3.12□□□□□ -1.91
PRPF39-207ENST00000554439 TNFRSF10BO14763 440 aa3.12□□□□□ -1.91
PRPF39-207ENST00000554439 IPO8O15397 1037 aaKnown RBP3.12□□□□□ -1.91
PRPF39-207ENST00000554439 SMARCA5O60264 1052 aaPredicted RBP3.12□□□□□ -1.91
PRPF39-207ENST00000554439 FAM13AO94988 1023 aa3.12□□□□□ -1.91
PRPF39-207ENST00000554439 HMOX1P09601 288 aa3.12□□□□□ -1.91
PRPF39-207ENST00000554439 ERCC5P28715 1186 aaPredicted RBP3.12□□□□□ -1.91
PRPF39-207ENST00000554439 ZNF445P59923 1031 aa3.12□□□□□ -1.91
PRPF39-207ENST00000554439 ERVK-9P63128 1117 aa3.12□□□□□ -1.91
PRPF39-207ENST00000554439 FOXD4L6Q3SYB3 417 aaPredicted RBP3.12□□□□□ -1.91
PRPF39-207ENST00000554439 FOXD4L3Q6VB84 417 aaPredicted RBP3.12□□□□□ -1.91
PRPF39-207ENST00000554439 CLEC17AQ6ZS10 378 aa3.12□□□□□ -1.91
PRPF39-207ENST00000554439 PODNQ7Z5L7 613 aa3.12□□□□□ -1.91
PRPF39-207ENST00000554439 TNS4Q8IZW8 715 aa3.12□□□□□ -1.91
PRPF39-207ENST00000554439 PIK3R5Q8WYR1 880 aa3.12□□□□□ -1.91
PRPF39-207ENST00000554439 PHACTR3Q96KR7 559 aa3.12□□□□□ -1.91
PRPF39-207ENST00000554439 CNTNAP3BQ96NU0 1288 aa3.12□□□□□ -1.91
PRPF39-207ENST00000554439 CNTNAP3Q9BZ76 1288 aa3.12□□□□□ -1.91
PRPF39-207ENST00000554439 C14orf93Q9H972 538 aaKnown RBP3.12□□□□□ -1.91
PRPF39-207ENST00000554439 CCDC87Q9NVE4 849 aa3.12□□□□□ -1.91
PRPF39-207ENST00000554439 TMEM63CQ9P1W3 806 aa3.12□□□□□ -1.91
PRPF39-207ENST00000554439 NOL7Q9UMY1 257 aaKnown RBP3.12□□□□□ -1.91
PRPF39-207ENST00000554439 FCF1Q9Y324 198 aaKnown RBP3.12□□□□□ -1.91
PRPF39-207ENST00000554439 DEPDC5O75140 1603 aa3.12□□□□□ -1.91
PRPF39-207ENST00000554439 A0A1W2PP64 1363 aa3.12□□□□□ -1.91
PRPF39-207ENST00000554439 ABCC11Q96J66 1382 aa3.12□□□□□ -1.91
PRPF39-207ENST00000554439 SBNO2Q9Y2G9 1366 aa3.12□□□□□ -1.91
PRPF39-207ENST00000554439 TULP4Q9NRJ4 1543 aa3.12□□□□□ -1.91
PRPF39-207ENST00000554439 FAM177BA6PVY3 158 aa3.12□□□□□ -1.91
PRPF39-207ENST00000554439 SCAMP3O14828 347 aaKnown RBP3.12□□□□□ -1.91
PRPF39-207ENST00000554439 FYB1O15117 783 aa3.12□□□□□ -1.91
PRPF39-207ENST00000554439 GPR182O15218 404 aa3.12□□□□□ -1.91
PRPF39-207ENST00000554439 VAMP4O75379 141 aa3.12□□□□□ -1.91
PRPF39-207ENST00000554439 CDC45O75419 566 aa3.12□□□□□ -1.91
PRPF39-207ENST00000554439 CYP2E1P05181 493 aaPredicted RBP3.12□□□□□ -1.91
PRPF39-207ENST00000554439 SCG3Q8WXD2 468 aaKnown RBP3.12□□□□□ -1.91
PRPF39-207ENST00000554439 UBXN4Q92575 508 aa3.12□□□□□ -1.91
PRPF39-207ENST00000554439 PDLIM2Q96JY6 352 aa3.12□□□□□ -1.91
PRPF39-207ENST00000554439 SETDB2Q96T68 719 aa3.12□□□□□ -1.91
PRPF39-207ENST00000554439 FAM129BQ96TA1 746 aa3.12□□□□□ -1.91
PRPF39-207ENST00000554439 USP26Q9BXU7 913 aa3.12□□□□□ -1.91
PRPF39-207ENST00000554439 TSPAN10Q9H1Z9 355 aaPredicted RBP3.12□□□□□ -1.91
PRPF39-207ENST00000554439 OSBPL3Q9H4L5 887 aa3.12□□□□□ -1.91
PRPF39-207ENST00000554439 ANKRD36BQ8N2N9 1353 aa3.12□□□□□ -1.91
PRPF39-207ENST00000554439 NRXN1Q9ULB1 1477 aa3.12□□□□□ -1.91
PRPF39-207ENST00000554439 EVC2Q86UK5 1308 aa3.12□□□□□ -1.91
PRPF39-207ENST00000554439 MROH1Q8NDA8 1641 aa3.12□□□□□ -1.91
PRPF39-207ENST00000554439 ERVH48-1M5A8F1 160 aa3.12□□□□□ -1.91
PRPF39-207ENST00000554439 ZNF500O60304 480 aaPredicted RBP3.12□□□□□ -1.91
PRPF39-207ENST00000554439 ITGB2P05107 769 aa3.12□□□□□ -1.91
PRPF39-207ENST00000554439 PTMSP20962 102 aa3.12□□□□□ -1.91
PRPF39-207ENST00000554439 PRKAR2BP31323 418 aa3.12□□□□□ -1.91
PRPF39-207ENST00000554439 AGERQ15109 404 aa3.12□□□□□ -1.91
PRPF39-207ENST00000554439 NOL8Q76FK4 1167 aaKnown RBP3.12□□□□□ -1.91
PRPF39-207ENST00000554439 GCC1Q96CN9 775 aa3.12□□□□□ -1.91
PRPF39-207ENST00000554439 SPATA32Q96LK8 384 aa3.12□□□□□ -1.91
PRPF39-207ENST00000554439 ZNF830Q96NB3 372 aaPredicted RBP3.12□□□□□ -1.91
PRPF39-207ENST00000554439 KCTD15Q96SI1 283 aaPredicted RBP3.12□□□□□ -1.91
PRPF39-207ENST00000554439 TINF2Q9BSI4 451 aa3.12□□□□□ -1.91
PRPF39-207ENST00000554439 PARP2Q9UGN5 583 aa3.12□□□□□ -1.91
PRPF39-207ENST00000554439 IBTKQ9P2D0 1353 aaPredicted RBP3.12□□□□□ -1.91
PRPF39-207ENST00000554439 COL3A1P02461 1466 aaPredicted RBP3.12□□□□□ -1.91
PRPF39-207ENST00000554439 ADGRB1O14514 1584 aa3.12□□□□□ -1.91
PRPF39-207ENST00000554439 VWDEQ8N2E2 1590 aa3.12□□□□□ -1.91
PRPF39-207ENST00000554439 PPRC1Q5VV67 1664 aaKnown RBP3.12□□□□□ -1.91
PRPF39-207ENST00000554439 KNDC1Q76NI1 1749 aa3.11□□□□□ -1.91
PRPF39-207ENST00000554439 ZCCHC11Q5TAX3 1644 aaKnown RBP3.11□□□□□ -1.91
PRPF39-207ENST00000554439 INO80Q9ULG1 1556 aaPredicted RBP3.11□□□□□ -1.91
PRPF39-207ENST00000554439 MED14O60244 1454 aa3.11□□□□□ -1.91
PRPF39-207ENST00000554439 ADGRL1O94910 1474 aa3.11□□□□□ -1.91
PRPF39-207ENST00000554439 FAM83GA6ND36 823 aa3.11□□□□□ -1.91
PRPF39-207ENST00000554439 DIAPH1O60610 1272 aaKnown RBP3.11□□□□□ -1.91
PRPF39-207ENST00000554439 EIF1AXP47813 144 aaKnown RBP3.11□□□□□ -1.91
PRPF39-207ENST00000554439 FANCCQ00597 558 aa3.11□□□□□ -1.91
PRPF39-207ENST00000554439 EHHADHQ08426 723 aa3.11□□□□□ -1.91
PRPF39-207ENST00000554439 DCTN1Q14203 1278 aa3.11□□□□□ -1.91
PRPF39-207ENST00000554439 KRT24Q2M2I5 525 aa3.11□□□□□ -1.91
PRPF39-207ENST00000554439 ALDH1L2Q3SY69 923 aa3.11□□□□□ -1.91
PRPF39-207ENST00000554439 INTS6LQ5JSJ4 861 aaKnown RBP3.11□□□□□ -1.91
PRPF39-207ENST00000554439 COX20Q5RI15 118 aa3.11□□□□□ -1.91
PRPF39-207ENST00000554439 TSHZ3Q63HK5 1081 aa3.11□□□□□ -1.91
PRPF39-207ENST00000554439 GGT6Q6P531 493 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms