RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 HELLSQ9NRZ9 838 aa9.24□□□□□ -0.93
TDP1-209ENST00000554180 NDUFB9Q9Y6M9 179 aa9.24□□□□□ -0.93
TDP1-209ENST00000554180 AKAP11Q9UKA4 1901 aa9.24□□□□□ -0.93
TDP1-209ENST00000554180 SALL1Q9NSC2 1324 aa9.24□□□□□ -0.93
TDP1-209ENST00000554180 SLX4Q8IY92 1834 aa9.24□□□□□ -0.93
TDP1-209ENST00000554180 AK9Q5TCS8 1911 aa9.23□□□□□ -0.93
TDP1-209ENST00000554180 RNF113AO15541 343 aaKnown RBP9.23□□□□□ -0.93
TDP1-209ENST00000554180 FRAT2O75474 233 aaPredicted RBP9.23□□□□□ -0.93
TDP1-209ENST00000554180 SEC24BO95487 1268 aa9.23□□□□□ -0.93
TDP1-209ENST00000554180 MAP3K12Q12852 859 aa9.23□□□□□ -0.93
TDP1-209ENST00000554180 UBE3CQ15386 1083 aa9.23□□□□□ -0.93
TDP1-209ENST00000554180 WASHC4Q2M389 1173 aa9.23□□□□□ -0.93
TDP1-209ENST00000554180 DALRD3Q5D0E6 543 aaKnown RBP9.23□□□□□ -0.93
TDP1-209ENST00000554180 ZMYM1Q5SVZ6 1142 aa9.23□□□□□ -0.93
TDP1-209ENST00000554180 CWC27Q6UX04 472 aaKnown RBP9.23□□□□□ -0.93
TDP1-209ENST00000554180 WDR66Q8TBY9 1149 aa9.23□□□□□ -0.93
TDP1-209ENST00000554180 TBC1D32Q96NH3 1257 aa9.23□□□□□ -0.93
TDP1-209ENST00000554180 ZC3H12CQ9C0D7 883 aaKnown RBP9.23□□□□□ -0.93
TDP1-209ENST00000554180 VPS33BQ9H267 617 aa9.23□□□□□ -0.93
TDP1-209ENST00000554180 ANTXR1Q9H6X2 564 aa9.23□□□□□ -0.93
TDP1-209ENST00000554180 CD209Q9NNX6 404 aa9.23□□□□□ -0.93
TDP1-209ENST00000554180 A0A0D9SFI3 127 aa9.22□□□□□ -0.93
TDP1-209ENST00000554180 IDH1O75874 414 aaKnown RBP9.22□□□□□ -0.93
TDP1-209ENST00000554180 RBM25P49756 843 aaKnown RBP9.22□□□□□ -0.93
TDP1-209ENST00000554180 KIAA2012Q0VF49 1180 aa9.22□□□□□ -0.93
TDP1-209ENST00000554180 NMIQ13287 307 aaPredicted RBP9.22□□□□□ -0.93
TDP1-209ENST00000554180 SPTY2D1Q68D10 685 aaPredicted RBP9.22□□□□□ -0.93
TDP1-209ENST00000554180 OLFM4Q6UX06 510 aa9.22□□□□□ -0.93
TDP1-209ENST00000554180 KIAA1211Q6ZU35 1233 aa9.22□□□□□ -0.93
TDP1-209ENST00000554180 TBC1D22AQ8WUA7 517 aa9.22□□□□□ -0.93
TDP1-209ENST00000554180 APPBP2Q92624 585 aa9.22□□□□□ -0.93
TDP1-209ENST00000554180 PIH1D3Q9NQM4 214 aaKnown RBP9.22□□□□□ -0.93
TDP1-209ENST00000554180 C21orf2O43822 256 aa9.21□□□□□ -0.94
TDP1-209ENST00000554180 PDE6AP16499 860 aa9.21□□□□□ -0.94
TDP1-209ENST00000554180 ADD2P35612 726 aa9.21□□□□□ -0.94
TDP1-209ENST00000554180 MCMDC2Q4G0Z9 681 aa9.21□□□□□ -0.94
TDP1-209ENST00000554180 SLC9C2Q5TAH2 1124 aa9.21□□□□□ -0.94
TDP1-209ENST00000554180 PODNQ7Z5L7 613 aa9.21□□□□□ -0.94
TDP1-209ENST00000554180 FAM227BQ96M60 508 aa9.21□□□□□ -0.94
TDP1-209ENST00000554180 USP26Q9BXU7 913 aa9.21□□□□□ -0.94
TDP1-209ENST00000554180 C22orf23Q9BZE7 217 aa9.21□□□□□ -0.94
TDP1-209ENST00000554180 ANO2Q9NQ90 1003 aa9.21□□□□□ -0.94
TDP1-209ENST00000554180 LRP2BPQ9P2M1 347 aa9.21□□□□□ -0.94
TDP1-209ENST00000554180 PPP1R1BQ9UD71 204 aaPredicted RBP9.21□□□□□ -0.94
TDP1-209ENST00000554180 IQSEC3Q9UPP2 1182 aaPredicted RBP9.21□□□□□ -0.94
TDP1-209ENST00000554180 SUGT1Q9Y2Z0 365 aa9.21□□□□□ -0.94
TDP1-209ENST00000554180 FAM205AQ6ZU69 1335 aa9.21□□□□□ -0.94
TDP1-209ENST00000554180 DOCK2Q92608 1830 aa9.21□□□□□ -0.94
TDP1-209ENST00000554180 BRCA1P38398 1863 aaKnown RBP9.21□□□□□ -0.94
TDP1-209ENST00000554180 TCRBV5S4A2TA0A5A2 114 aa9.2□□□□□ -0.94
TDP1-209ENST00000554180 MCCP23508 829 aa9.2□□□□□ -0.94
TDP1-209ENST00000554180 ERICH6Q7L0X2 663 aa9.2□□□□□ -0.94
TDP1-209ENST00000554180 KLHL34Q8N239 644 aa9.2□□□□□ -0.94
TDP1-209ENST00000554180 GPR101Q96P66 508 aaPredicted RBP9.2□□□□□ -0.94
TDP1-209ENST00000554180 LSG1Q9H089 658 aaKnown RBP9.2□□□□□ -0.94
TDP1-209ENST00000554180 IL25Q9H293 177 aa9.2□□□□□ -0.94
TDP1-209ENST00000554180 ABCF2Q9UG63 623 aa9.2□□□□□ -0.94
TDP1-209ENST00000554180 RBM19Q9Y4C8 960 aaKnown RBP9.2□□□□□ -0.94
TDP1-209ENST00000554180 CCDC171Q6TFL3 1326 aa9.2□□□□□ -0.94
TDP1-209ENST00000554180 LTBP3Q9NS15 1303 aa9.2□□□□□ -0.94
TDP1-209ENST00000554180 CACNA1SQ13698 1873 aa9.19□□□□□ -0.94
TDP1-209ENST00000554180 G3V3G9 751 aa9.19□□□□□ -0.94
TDP1-209ENST00000554180 ANAPC15P60006 121 aa9.19□□□□□ -0.94
TDP1-209ENST00000554180 FKBP1AP62942 108 aaKnown RBP9.19□□□□□ -0.94
TDP1-209ENST00000554180 CHAF1AQ13111 956 aaPredicted RBP9.19□□□□□ -0.94
TDP1-209ENST00000554180 DCAF8Q5TAQ9 597 aa9.19□□□□□ -0.94
TDP1-209ENST00000554180 ZNF589Q86UQ0 364 aaPredicted RBP9.19□□□□□ -0.94
TDP1-209ENST00000554180 MAGEB6Q8N7X4 407 aa9.19□□□□□ -0.94
TDP1-209ENST00000554180 IL27Q8NEV9 243 aa9.19□□□□□ -0.94
TDP1-209ENST00000554180 OSBP2Q969R2 916 aa9.19□□□□□ -0.94
TDP1-209ENST00000554180 DSCC1Q9BVC3 393 aa9.19□□□□□ -0.94
TDP1-209ENST00000554180 RAI14Q9P0K7 980 aa9.19□□□□□ -0.94
TDP1-209ENST00000554180 ZNF219Q9P2Y4 722 aaPredicted RBP9.19□□□□□ -0.94
TDP1-209ENST00000554180 WWC3Q9ULE0 1092 aa9.19□□□□□ -0.94
TDP1-209ENST00000554180 MAST3O60307 1309 aa9.19□□□□□ -0.94
TDP1-209ENST00000554180 ZNF532Q9HCE3 1301 aa9.19□□□□□ -0.94
TDP1-209ENST00000554180 MAST2Q6P0Q8 1798 aa9.19□□□□□ -0.94
TDP1-209ENST00000554180 RIMBP2O15034 1052 aa9.18□□□□□ -0.94
TDP1-209ENST00000554180 PPIP5K2O43314 1243 aa9.18□□□□□ -0.94
TDP1-209ENST00000554180 ECE2O60344 883 aa9.18□□□□□ -0.94
TDP1-209ENST00000554180 LDHBP07195 334 aaKnown RBP9.18□□□□□ -0.94
TDP1-209ENST00000554180 PRDX5P30044 214 aa9.18□□□□□ -0.94
TDP1-209ENST00000554180 GSTO1P78417 241 aa9.18□□□□□ -0.94
TDP1-209ENST00000554180 MFSD14BQ5SR56 506 aa9.18□□□□□ -0.94
TDP1-209ENST00000554180 STRIP1Q5VSL9 837 aa9.18□□□□□ -0.94
TDP1-209ENST00000554180 CERS3Q8IU89 383 aa9.18□□□□□ -0.94
TDP1-209ENST00000554180 NLGN2Q8NFZ4 835 aa9.18□□□□□ -0.94
TDP1-209ENST00000554180 MAP4K1Q92918 833 aa9.18□□□□□ -0.94
TDP1-209ENST00000554180 AIDAQ96BJ3 306 aa9.18□□□□□ -0.94
TDP1-209ENST00000554180 NSUN4Q96CB9 384 aaKnown RBP9.18□□□□□ -0.94
TDP1-209ENST00000554180 IL17RAQ96F46 866 aa9.18□□□□□ -0.94
TDP1-209ENST00000554180 FHDC1Q9C0D6 1143 aaPredicted RBP9.18□□□□□ -0.94
TDP1-209ENST00000554180 PUS7LQ9H0K6 701 aaKnown RBP9.18□□□□□ -0.94
TDP1-209ENST00000554180 TAOK3Q9H2K8 898 aa9.18□□□□□ -0.94
TDP1-209ENST00000554180 MYH13Q9UKX3 1938 aa9.18□□□□□ -0.94
TDP1-209ENST00000554180 BCS1LQ9Y276 419 aa9.18□□□□□ -0.94
TDP1-209ENST00000554180 MYH7P12883 1935 aa9.17□□□□□ -0.94
TDP1-209ENST00000554180 RPAP1Q9BWH6 1393 aaPredicted RBP9.17□□□□□ -0.94
TDP1-209ENST00000554180 ZMYM6O95789 1325 aa9.17□□□□□ -0.94
TDP1-209ENST00000554180 M0R2C6 588 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms