RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 APOBEC3FQ8IUX4 373 aaKnown RBP11.24□□□□□ -0.61
TDP1-208ENST00000553989 DNAAF4Q8WXU2 420 aa11.24□□□□□ -0.61
TDP1-208ENST00000553989 TBC1D8O95759 1140 aa11.23□□□□□ -0.61
TDP1-208ENST00000553989 CHRNDQ07001 517 aa11.23□□□□□ -0.61
TDP1-208ENST00000553989 SREBF2Q12772 1141 aa11.23□□□□□ -0.61
TDP1-208ENST00000553989 CCDC27Q2M243 656 aa11.23□□□□□ -0.61
TDP1-208ENST00000553989 PLA2G12BQ9BX93 195 aa11.23□□□□□ -0.61
TDP1-208ENST00000553989 SALL2Q9Y467 1007 aaPredicted RBP11.23□□□□□ -0.61
TDP1-208ENST00000553989 F8W031 263 aaPredicted RBP11.22□□□□□ -0.61
TDP1-208ENST00000553989 SLC34A2O95436 690 aa11.22□□□□□ -0.61
TDP1-208ENST00000553989 MMP14P50281 582 aa11.22□□□□□ -0.61
TDP1-208ENST00000553989 IFIT5Q13325 482 aaKnown RBP11.22□□□□□ -0.61
TDP1-208ENST00000553989 DLGAP5Q15398 846 aa11.22□□□□□ -0.61
TDP1-208ENST00000553989 CCDC184Q52MB2 194 aa11.22□□□□□ -0.61
TDP1-208ENST00000553989 TAF7LQ5H9L4 462 aa11.22□□□□□ -0.61
TDP1-208ENST00000553989 LINS1Q8NG48 757 aa11.22□□□□□ -0.61
TDP1-208ENST00000553989 ZNF296Q8WUU4 475 aaPredicted RBP11.22□□□□□ -0.61
TDP1-208ENST00000553989 FANCIQ9NVI1 1328 aa11.22□□□□□ -0.61
TDP1-208ENST00000553989 ZBTB47Q9UFB7 747 aaPredicted RBP11.22□□□□□ -0.61
TDP1-208ENST00000553989 ANGEL1Q9UNK9 670 aaKnown RBP11.22□□□□□ -0.61
TDP1-208ENST00000553989 IL16Q14005 1332 aa11.21□□□□□ -0.61
TDP1-208ENST00000553989 MYO1BO43795 1136 aa11.21□□□□□ -0.61
TDP1-208ENST00000553989 TAF5LO75529 589 aa11.21□□□□□ -0.61
TDP1-208ENST00000553989 ZNF804AQ7Z570 1209 aa11.21□□□□□ -0.61
TDP1-208ENST00000553989 HELBQ8NG08 1087 aaPredicted RBP11.21□□□□□ -0.61
TDP1-208ENST00000553989 MRS2Q9HD23 443 aa11.21□□□□□ -0.61
TDP1-208ENST00000553989 CD209Q9NNX6 404 aa11.21□□□□□ -0.61
TDP1-208ENST00000553989 HPS5Q9UPZ3 1129 aa11.21□□□□□ -0.61
TDP1-208ENST00000553989 CSF1RP07333 972 aa11.2□□□□□ -0.62
TDP1-208ENST00000553989 RBM5P52756 815 aaKnown RBP eCLIP11.2□□□□□ -0.62
TDP1-208ENST00000553989 CASP7P55210 303 aa11.2□□□□□ -0.62
TDP1-208ENST00000553989 PTPN12Q05209 780 aaKnown RBP11.2□□□□□ -0.62
TDP1-208ENST00000553989 PKN2Q16513 984 aaKnown RBP11.2□□□□□ -0.62
TDP1-208ENST00000553989 VEZTQ9HBM0 779 aa11.2□□□□□ -0.62
TDP1-208ENST00000553989 JAG2Q9Y219 1238 aa11.2□□□□□ -0.62
TDP1-208ENST00000553989 SUPT16HQ9Y5B9 1047 aaKnown RBP11.2□□□□□ -0.62
TDP1-208ENST00000553989 COL1A1P02452 1464 aaPredicted RBP11.19□□□□□ -0.62
TDP1-208ENST00000553989 CLRN2A0PK11 232 aa11.19□□□□□ -0.62
TDP1-208ENST00000553989 F6X3S4 739 aa11.19□□□□□ -0.62
TDP1-208ENST00000553989 GPR25O00155 361 aa11.19□□□□□ -0.62
TDP1-208ENST00000553989 SNAP23O00161 211 aa11.19□□□□□ -0.62
TDP1-208ENST00000553989 PLIN1O60240 522 aa11.19□□□□□ -0.62
TDP1-208ENST00000553989 TM4SF4P48230 202 aa11.19□□□□□ -0.62
TDP1-208ENST00000553989 CCDC57Q2TAC2 916 aa11.19□□□□□ -0.62
TDP1-208ENST00000553989 DEFB129Q9H1M3 183 aa11.19□□□□□ -0.62
TDP1-208ENST00000553989 CNNM1Q9NRU3 951 aa11.19□□□□□ -0.62
TDP1-208ENST00000553989 FZD1Q9UP38 647 aa11.19□□□□□ -0.62
TDP1-208ENST00000553989 ZNF646O15015 1829 aaPredicted RBP11.19□□□□□ -0.62
TDP1-208ENST00000553989 PPP1R12BO60237 982 aaPredicted RBP11.18□□□□□ -0.62
TDP1-208ENST00000553989 FKTNO75072 461 aa11.18□□□□□ -0.62
TDP1-208ENST00000553989 VAMP4O75379 141 aa11.18□□□□□ -0.62
TDP1-208ENST00000553989 EXOSC9Q06265 439 aaKnown RBP11.18□□□□□ -0.62
TDP1-208ENST00000553989 CFAP100Q494V2 611 aa11.18□□□□□ -0.62
TDP1-208ENST00000553989 SPRYD7Q5W111 196 aa11.18□□□□□ -0.62
TDP1-208ENST00000553989 SLC10A4Q96EP9 437 aa11.18□□□□□ -0.62
TDP1-208ENST00000553989 MANSC4A6NHS7 340 aaPredicted RBP11.17□□□□□ -0.62
TDP1-208ENST00000553989 ALDH1A1P00352 501 aa11.17□□□□□ -0.62
TDP1-208ENST00000553989 SUPT20HL1Q3ZLR7 823 aa11.17□□□□□ -0.62
TDP1-208ENST00000553989 SLC4A10Q6U841 1118 aa11.17□□□□□ -0.62
TDP1-208ENST00000553989 LMBR1LQ6UX01 489 aa11.17□□□□□ -0.62
TDP1-208ENST00000553989 LDHAL6AQ6ZMR3 332 aa11.17□□□□□ -0.62
TDP1-208ENST00000553989 WDR63Q8IWG1 891 aa11.17□□□□□ -0.62
TDP1-208ENST00000553989 CERS5Q8N5B7 392 aa11.17□□□□□ -0.62
TDP1-208ENST00000553989 ZBED3Q96IU2 234 aaPredicted RBP11.17□□□□□ -0.62
TDP1-208ENST00000553989 ZNF594Q96JF6 807 aaPredicted RBP11.17□□□□□ -0.62
TDP1-208ENST00000553989 C9orf78Q9NZ63 289 aaPredicted RBP11.17□□□□□ -0.62
TDP1-208ENST00000553989 PCDHAC2Q9Y5I4 1007 aa11.17□□□□□ -0.62
TDP1-208ENST00000553989 PPP2R3BQ9Y5P8 575 aa11.17□□□□□ -0.62
TDP1-208ENST00000553989 GRM8O00222 908 aa11.16□□□□□ -0.62
TDP1-208ENST00000553989 NEFLP07196 543 aa11.16□□□□□ -0.62
TDP1-208ENST00000553989 IL1R1P14778 569 aa11.16□□□□□ -0.62
TDP1-208ENST00000553989 IREB2P48200 963 aaKnown RBP11.16□□□□□ -0.62
TDP1-208ENST00000553989 FOXO4P98177 505 aa11.16□□□□□ -0.62
TDP1-208ENST00000553989 BEND3Q5T5X7 828 aa11.16□□□□□ -0.62
TDP1-208ENST00000553989 LDLRAD1Q5T700 205 aa11.16□□□□□ -0.62
TDP1-208ENST00000553989 FBXO46Q6PJ61 603 aaPredicted RBP11.16□□□□□ -0.62
TDP1-208ENST00000553989 ZBTB48P10074 688 aaPredicted RBP11.15□□□□□ -0.62
TDP1-208ENST00000553989 TNFAIP1Q13829 316 aa11.15□□□□□ -0.62
TDP1-208ENST00000553989 NOM1Q5C9Z4 860 aaKnown RBP11.15□□□□□ -0.62
TDP1-208ENST00000553989 C15orf52Q6ZUT6 534 aaKnown RBP11.15□□□□□ -0.62
TDP1-208ENST00000553989 IFNL1Q8IU54 200 aa11.15□□□□□ -0.62
TDP1-208ENST00000553989 MTMR14Q8NCE2 650 aa11.15□□□□□ -0.62
TDP1-208ENST00000553989 WNK4Q96J92 1243 aa11.15□□□□□ -0.62
TDP1-208ENST00000553989 CLMNQ96JQ2 1002 aa11.15□□□□□ -0.62
TDP1-208ENST00000553989 CIZ1Q9ULV3 898 aaPredicted RBP11.15□□□□□ -0.62
TDP1-208ENST00000553989 IRS2Q9Y4H2 1338 aa11.14□□□□□ -0.63
TDP1-208ENST00000553989 INHBEP58166 350 aa11.14□□□□□ -0.63
TDP1-208ENST00000553989 FKBP1AP62942 108 aaKnown RBP11.14□□□□□ -0.63
TDP1-208ENST00000553989 MAP3K11Q16584 847 aa11.14□□□□□ -0.63
TDP1-208ENST00000553989 EPHA10Q5JZY3 1008 aa11.14□□□□□ -0.63
TDP1-208ENST00000553989 MFSD14BQ5SR56 506 aa11.14□□□□□ -0.63
TDP1-208ENST00000553989 NBPF12Q5TAG4 269 aaPredicted RBP11.14□□□□□ -0.63
TDP1-208ENST00000553989 OTUD7BQ6GQQ9 843 aa11.14□□□□□ -0.63
TDP1-208ENST00000553989 VPS37DQ86XT2 251 aa11.14□□□□□ -0.63
TDP1-208ENST00000553989 PRMT6Q96LA8 375 aaPredicted RBP11.14□□□□□ -0.63
TDP1-208ENST00000553989 SRCIN1Q9C0H9 1055 aa11.14□□□□□ -0.63
TDP1-208ENST00000553989 R3HDMLQ9H3Y0 253 aa11.14□□□□□ -0.63
TDP1-208ENST00000553989 TTF2Q9UNY4 1162 aaKnown RBP11.14□□□□□ -0.63
TDP1-208ENST00000553989 TRIM17Q9Y577 477 aa11.14□□□□□ -0.63
TDP1-208ENST00000553989 SSC5DA1L4H1 1573 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms