RNA–Protein interactions for RNA: ENST00000553807.1

XRCC3-205, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-205ENST00000553807 F8W031 263 aaPredicted RBP25.37■■□□□ 1.65
XRCC3-205ENST00000553807 SASH1O94885 1247 aa25.37■■□□□ 1.65
XRCC3-205ENST00000553807 ATP2B3Q16720 1220 aa25.37■■□□□ 1.65
XRCC3-205ENST00000553807 KRT26Q7Z3Y9 468 aa25.37■■□□□ 1.65
XRCC3-205ENST00000553807 FBXO33Q7Z6M2 555 aa25.37■■□□□ 1.65
XRCC3-205ENST00000553807 LPIN2Q92539 896 aa25.37■■□□□ 1.65
XRCC3-205ENST00000553807 ZNF408Q9H9D4 720 aa25.37■■□□□ 1.65
XRCC3-205ENST00000553807 MKRN1Q9UHC7 482 aaKnown RBP25.37■■□□□ 1.65
XRCC3-205ENST00000553807 HDAC9Q9UKV0 1011 aa25.37■■□□□ 1.65
XRCC3-205ENST00000553807 TRPM7Q96QT4 1865 aa25.36■■□□□ 1.65
XRCC3-205ENST00000553807 ADM5C9JUS6 153 aa25.36■■□□□ 1.65
XRCC3-205ENST00000553807 FRAT2O75474 233 aaPredicted RBP25.36■■□□□ 1.65
XRCC3-205ENST00000553807 MS4A1P11836 297 aa25.36■■□□□ 1.65
XRCC3-205ENST00000553807 BCAMP50895 628 aa25.36■■□□□ 1.65
XRCC3-205ENST00000553807 ANGEL2Q5VTE6 544 aaKnown RBP25.36■■□□□ 1.65
XRCC3-205ENST00000553807 ABT1Q9ULW3 272 aaKnown RBP25.36■■□□□ 1.65
XRCC3-205ENST00000553807 ZBTB7BO15156 539 aaPredicted RBP25.35■■□□□ 1.65
XRCC3-205ENST00000553807 CHAF1AQ13111 956 aaPredicted RBP25.35■■□□□ 1.65
XRCC3-205ENST00000553807 DLK2Q6UY11 383 aa25.35■■□□□ 1.65
XRCC3-205ENST00000553807 FAM205AQ6ZU69 1335 aa25.35■■□□□ 1.65
XRCC3-205ENST00000553807 CELF2O95319 508 aaKnown RBP25.34■■□□□ 1.65
XRCC3-205ENST00000553807 MFSD14BQ5SR56 506 aa25.34■■□□□ 1.65
XRCC3-205ENST00000553807 SULF1Q8IWU6 871 aa25.34■■□□□ 1.65
XRCC3-205ENST00000553807 ARAP2Q8WZ64 1704 aa25.34■■□□□ 1.65
XRCC3-205ENST00000553807 FKBP1AP62942 108 aaKnown RBP25.33■■□□□ 1.65
XRCC3-205ENST00000553807 NBPF9Q3BBW0 867 aa25.33■■□□□ 1.65
XRCC3-205ENST00000553807 CNTNAP1P78357 1384 aa25.32■■□□□ 1.64
XRCC3-205ENST00000553807 CST9Q5W186 159 aa25.32■■□□□ 1.64
XRCC3-205ENST00000553807 WNT10BO00744 389 aa25.31■■□□□ 1.64
XRCC3-205ENST00000553807 MMP14P50281 582 aa25.31■■□□□ 1.64
XRCC3-205ENST00000553807 TFCP2Q12800 502 aa25.31■■□□□ 1.64
XRCC3-205ENST00000553807 COG6Q9Y2V7 657 aa25.31■■□□□ 1.64
XRCC3-205ENST00000553807 POLR2AP24928 1970 aaKnown RBP25.31■■□□□ 1.64
XRCC3-205ENST00000553807 MVPQ14764 893 aaKnown RBP25.3■■□□□ 1.64
XRCC3-205ENST00000553807 SCAF8Q9UPN6 1271 aaKnown RBP25.3■■□□□ 1.64
XRCC3-205ENST00000553807 ADORA1P30542 326 aa25.29■■□□□ 1.64
XRCC3-205ENST00000553807 ATP8B2P98198 1209 aa25.29■■□□□ 1.64
XRCC3-205ENST00000553807 G3BP1Q13283 466 aaKnown RBP eCLIP25.29■■□□□ 1.64
XRCC3-205ENST00000553807 POLA2Q14181 598 aa25.29■■□□□ 1.64
XRCC3-205ENST00000553807 DLGAP5Q15398 846 aa25.29■■□□□ 1.64
XRCC3-205ENST00000553807 PITPNM2Q9BZ72 1349 aa25.29■■□□□ 1.64
XRCC3-205ENST00000553807 MYH13Q9UKX3 1938 aa25.29■■□□□ 1.64
XRCC3-205ENST00000553807 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.28■■□□□ 1.64
XRCC3-205ENST00000553807 TTF2Q9UNY4 1162 aaKnown RBP25.28■■□□□ 1.64
XRCC3-205ENST00000553807 PCDHAC2Q9Y5I4 1007 aa25.28■■□□□ 1.64
XRCC3-205ENST00000553807 COL1A1P02452 1464 aaPredicted RBP25.28■■□□□ 1.64
XRCC3-205ENST00000553807 RBM5P52756 815 aaKnown RBP eCLIP25.27■■□□□ 1.64
XRCC3-205ENST00000553807 OS9Q13438 667 aaPredicted RBP25.27■■□□□ 1.64
XRCC3-205ENST00000553807 CFAP100Q494V2 611 aa25.27■■□□□ 1.64
XRCC3-205ENST00000553807 PAXIP1Q6ZW49 1069 aaPredicted RBP25.27■■□□□ 1.64
XRCC3-205ENST00000553807 SSH3Q8TE77 659 aa25.27■■□□□ 1.64
XRCC3-205ENST00000553807 TBC1D22AQ8WUA7 517 aa25.27■■□□□ 1.64
XRCC3-205ENST00000553807 CDCA5Q96FF9 252 aa25.27■■□□□ 1.64
XRCC3-205ENST00000553807 DDX19BQ9UMR2 479 aa25.27■■□□□ 1.64
XRCC3-205ENST00000553807 AKAP2Q9Y2D5 859 aa25.27■■□□□ 1.64
XRCC3-205ENST00000553807 RASSF10A6NK89 507 aa25.26■■□□□ 1.63
XRCC3-205ENST00000553807 PHKA1P46020 1223 aa25.26■■□□□ 1.63
XRCC3-205ENST00000553807 C20orf194Q5TEA3 1177 aa25.26■■□□□ 1.63
XRCC3-205ENST00000553807 CEP85Q6P2H3 762 aa25.26■■□□□ 1.63
XRCC3-205ENST00000553807 JMYQ8N9B5 988 aa25.26■■□□□ 1.63
XRCC3-205ENST00000553807 ZBED3Q96IU2 234 aaPredicted RBP25.26■■□□□ 1.63
XRCC3-205ENST00000553807 GNL3LQ9NVN8 582 aaKnown RBP25.26■■□□□ 1.63
XRCC3-205ENST00000553807 TLL2Q9Y6L7 1015 aa25.26■■□□□ 1.63
XRCC3-205ENST00000553807 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.26■■□□□ 1.63
XRCC3-205ENST00000553807 A0A1B0GUL7 405 aa25.25■■□□□ 1.63
XRCC3-205ENST00000553807 TIMM10P62072 90 aa25.25■■□□□ 1.63
XRCC3-205ENST00000553807 GRIK5Q16478 980 aa25.25■■□□□ 1.63
XRCC3-205ENST00000553807 DEFB115Q30KQ5 88 aa25.25■■□□□ 1.63
XRCC3-205ENST00000553807 SURF6O75683 361 aaKnown RBP25.24■■□□□ 1.63
XRCC3-205ENST00000553807 VEGFBP49765 207 aa25.24■■□□□ 1.63
XRCC3-205ENST00000553807 MTMR14Q8NCE2 650 aa25.24■■□□□ 1.63
XRCC3-205ENST00000553807 NEUROD6Q96NK8 337 aa25.24■■□□□ 1.63
XRCC3-205ENST00000553807 SPDYE2BA6NHP3 402 aa25.23■■□□□ 1.63
XRCC3-205ENST00000553807 SPDYE6P0CI01 402 aa25.23■■□□□ 1.63
XRCC3-205ENST00000553807 GRM1Q13255 1194 aa25.23■■□□□ 1.63
XRCC3-205ENST00000553807 APOBEC3FQ8IUX4 373 aaKnown RBP25.23■■□□□ 1.63
XRCC3-205ENST00000553807 XAGE2Q96GT9 111 aa25.23■■□□□ 1.63
XRCC3-205ENST00000553807 AOX1Q06278 1338 aa25.22■■□□□ 1.63
XRCC3-205ENST00000553807 ECM29Q5VYK3 1845 aa25.22■■□□□ 1.63
XRCC3-205ENST00000553807 CLRN2A0PK11 232 aa25.22■■□□□ 1.63
XRCC3-205ENST00000553807 MYO1BO43795 1136 aa25.22■■□□□ 1.63
XRCC3-205ENST00000553807 CCDC102BQ68D86 513 aa25.22■■□□□ 1.63
XRCC3-205ENST00000553807 SAPCD2Q86UD0 394 aa25.22■■□□□ 1.63
XRCC3-205ENST00000553807 GBA2Q9HCG7 927 aaPredicted RBP25.22■■□□□ 1.63
XRCC3-205ENST00000553807 SERPINA10Q9UK55 444 aa25.22■■□□□ 1.63
XRCC3-205ENST00000553807 PDE3AQ14432 1141 aa25.21■■□□□ 1.63
XRCC3-205ENST00000553807 PRAMEF18Q5VWM3 479 aa25.21■■□□□ 1.63
XRCC3-205ENST00000553807 WDR66Q8TBY9 1149 aa25.21■■□□□ 1.63
XRCC3-205ENST00000553807 PRMT6Q96LA8 375 aaPredicted RBP25.21■■□□□ 1.63
XRCC3-205ENST00000553807 VEZTQ9HBM0 779 aa25.21■■□□□ 1.63
XRCC3-205ENST00000553807 CRKP46108 304 aa25.2■■□□□ 1.62
XRCC3-205ENST00000553807 GORABQ5T7V8 394 aa25.2■■□□□ 1.62
XRCC3-205ENST00000553807 CYP4F22Q6NT55 531 aa25.2■■□□□ 1.62
XRCC3-205ENST00000553807 C2orf69Q8N8R5 385 aa25.2■■□□□ 1.62
XRCC3-205ENST00000553807 ZBTB40Q9NUA8 1239 aa25.2■■□□□ 1.62
XRCC3-205ENST00000553807 DENND2AQ9ULE3 1009 aa25.2■■□□□ 1.62
XRCC3-205ENST00000553807 SEMA3EO15041 775 aa25.19■■□□□ 1.62
XRCC3-205ENST00000553807 HUNKP57058 714 aa25.19■■□□□ 1.62
XRCC3-205ENST00000553807 CAPNS2Q96L46 248 aa25.19■■□□□ 1.62
XRCC3-205ENST00000553807 CHMP4BQ9H444 224 aaKnown RBP25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms