RNA–Protein interactions for RNA: ENST00000553727.1

SV2B-204, Transcript of synaptic vesicle glycoprotein 2B, humanhuman

TSL 4

Gene SV2B, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SV2B-204ENST00000553727 KIF1BPQ96EK5 621 aa17.57■□□□□ 0.4
SV2B-204ENST00000553727 IL1RAPL2Q9NP60 686 aa17.57■□□□□ 0.4
SV2B-204ENST00000553727 RBM26Q5T8P6 1007 aaKnown RBP17.56■□□□□ 0.4
SV2B-204ENST00000553727 CCDC8Q9H0W5 538 aaPredicted RBP17.56■□□□□ 0.4
SV2B-204ENST00000553727 ADARB2Q9NS39 739 aaKnown RBP17.56■□□□□ 0.4
SV2B-204ENST00000553727 CLEC11AQ9Y240 323 aa17.56■□□□□ 0.4
SV2B-204ENST00000553727 ZNF609O15014 1411 aa17.55■□□□□ 0.4
SV2B-204ENST00000553727 SCN9AQ15858 1988 aa17.55■□□□□ 0.4
SV2B-204ENST00000553727 MYO3BQ8WXR4 1341 aa17.55■□□□□ 0.4
SV2B-204ENST00000553727 CENPBP07199 599 aaPredicted RBP17.55■□□□□ 0.4
SV2B-204ENST00000553727 USP17L8P0C7I0 530 aa17.55■□□□□ 0.4
SV2B-204ENST00000553727 AACSQ86V21 672 aa17.55■□□□□ 0.4
SV2B-204ENST00000553727 PNMA8AQ86V59 439 aaPredicted RBP17.55■□□□□ 0.4
SV2B-204ENST00000553727 KIAA0825Q8IV33 1275 aa17.55■□□□□ 0.4
SV2B-204ENST00000553727 EAF2Q96CJ1 260 aaPredicted RBP17.55■□□□□ 0.4
SV2B-204ENST00000553727 GMLQ99445 158 aa17.55■□□□□ 0.4
SV2B-204ENST00000553727 DBNDD2Q9BQY9 259 aa17.55■□□□□ 0.4
SV2B-204ENST00000553727 FAM205AQ6ZU69 1335 aa17.54■□□□□ 0.4
SV2B-204ENST00000553727 F8W031 263 aaPredicted RBP17.54■□□□□ 0.4
SV2B-204ENST00000553727 TOMM70O94826 608 aa17.54■□□□□ 0.4
SV2B-204ENST00000553727 POTEIP0CG38 1075 aa17.54■□□□□ 0.4
SV2B-204ENST00000553727 POTEJP0CG39 1038 aa17.54■□□□□ 0.4
SV2B-204ENST00000553727 TBC1D10BQ4KMP7 808 aaPredicted RBP17.54■□□□□ 0.4
SV2B-204ENST00000553727 MFSD14BQ5SR56 506 aa17.54■□□□□ 0.4
SV2B-204ENST00000553727 SAMD7Q7Z3H4 446 aa17.54■□□□□ 0.4
SV2B-204ENST00000553727 CLASRPQ8N2M8 674 aaKnown RBP17.54■□□□□ 0.4
SV2B-204ENST00000553727 OGFOD1Q8N543 542 aa17.54■□□□□ 0.4
SV2B-204ENST00000553727 CERS5Q8N5B7 392 aa17.54■□□□□ 0.4
SV2B-204ENST00000553727 DCTPP1Q9H773 170 aa17.54■□□□□ 0.4
SV2B-204ENST00000553727 CCDC158Q5M9N0 1113 aa17.53■□□□□ 0.4
SV2B-204ENST00000553727 USP50Q70EL3 339 aaPredicted RBP17.53■□□□□ 0.4
SV2B-204ENST00000553727 LRRCC1Q9C099 1032 aa17.53■□□□□ 0.4
SV2B-204ENST00000553727 SMARCA5O60264 1052 aaPredicted RBP17.52■□□□□ 0.4
SV2B-204ENST00000553727 FKBP1AP62942 108 aaKnown RBP17.52■□□□□ 0.4
SV2B-204ENST00000553727 TTC39AQ5SRH9 613 aa17.52■□□□□ 0.4
SV2B-204ENST00000553727 TRPM4Q8TD43 1214 aa17.52■□□□□ 0.4
SV2B-204ENST00000553727 TLR7Q9NYK1 1049 aaKnown RBP17.52■□□□□ 0.4
SV2B-204ENST00000553727 DBNLQ9UJU6 430 aaKnown RBP17.52■□□□□ 0.4
SV2B-204ENST00000553727 HDAC9Q9UKV0 1011 aa17.52■□□□□ 0.4
SV2B-204ENST00000553727 DENND2AQ9ULE3 1009 aa17.52■□□□□ 0.4
SV2B-204ENST00000553727 SEMA3EO15041 775 aa17.51■□□□□ 0.39
SV2B-204ENST00000553727 IFIT2P09913 472 aaKnown RBP17.51■□□□□ 0.39
SV2B-204ENST00000553727 UQCRFS1P1P0C7P4 283 aa17.51■□□□□ 0.39
SV2B-204ENST00000553727 ZNF280AP59817 542 aaPredicted RBP17.51■□□□□ 0.39
SV2B-204ENST00000553727 LDHDQ86WU2 507 aa17.51■□□□□ 0.39
SV2B-204ENST00000553727 RBM46Q8TBY0 533 aaKnown RBP17.51■□□□□ 0.39
SV2B-204ENST00000553727 WDR66Q8TBY9 1149 aa17.51■□□□□ 0.39
SV2B-204ENST00000553727 TBC1D22AQ8WUA7 517 aa17.51■□□□□ 0.39
SV2B-204ENST00000553727 SCN4AP35499 1836 aa17.5■□□□□ 0.39
SV2B-204ENST00000553727 EGFRP00533 1210 aa17.5■□□□□ 0.39
SV2B-204ENST00000553727 HIRAP54198 1017 aaPredicted RBP17.5■□□□□ 0.39
SV2B-204ENST00000553727 HDAC1Q13547 482 aaPredicted RBP17.5■□□□□ 0.39
SV2B-204ENST00000553727 RASGRF1Q13972 1273 aa17.5■□□□□ 0.39
SV2B-204ENST00000553727 KIF4BQ2VIQ3 1234 aa17.5■□□□□ 0.39
SV2B-204ENST00000553727 SMC1BQ8NDV3 1235 aa17.5■□□□□ 0.39
SV2B-204ENST00000553727 RWDD1Q9H446 243 aaPredicted RBP17.5■□□□□ 0.39
SV2B-204ENST00000553727 MYOZ2Q9NPC6 264 aa17.5■□□□□ 0.39
SV2B-204ENST00000553727 GRIK5Q16478 980 aa17.49■□□□□ 0.39
SV2B-204ENST00000553727 CHADLQ6NUI6 762 aa17.49■□□□□ 0.39
SV2B-204ENST00000553727 HMG20BQ9P0W2 317 aa17.49■□□□□ 0.39
SV2B-204ENST00000553727 TTF2Q9UNY4 1162 aaKnown RBP17.49■□□□□ 0.39
SV2B-204ENST00000553727 ARID4AP29374 1257 aaPredicted RBP17.48■□□□□ 0.39
SV2B-204ENST00000553727 RBM5P52756 815 aaKnown RBP eCLIP17.48■□□□□ 0.39
SV2B-204ENST00000553727 SCARF1Q14162 830 aa17.48■□□□□ 0.39
SV2B-204ENST00000553727 MAP1SQ66K74 1059 aaPredicted RBP17.48■□□□□ 0.39
SV2B-204ENST00000553727 SPATA5Q8NB90 893 aa17.48■□□□□ 0.39
SV2B-204ENST00000553727 SNRKQ9NRH2 765 aa17.48■□□□□ 0.39
SV2B-204ENST00000553727 ZBTB47Q9UFB7 747 aaPredicted RBP17.48■□□□□ 0.39
SV2B-204ENST00000553727 COL1A1P02452 1464 aaPredicted RBP17.48■□□□□ 0.39
SV2B-204ENST00000553727 IGHDP01880 384 aa17.47■□□□□ 0.39
SV2B-204ENST00000553727 MCAMP43121 646 aa17.47■□□□□ 0.39
SV2B-204ENST00000553727 MMP14P50281 582 aa17.47■□□□□ 0.39
SV2B-204ENST00000553727 DLGAP5Q15398 846 aa17.47■□□□□ 0.39
SV2B-204ENST00000553727 PI16Q6UXB8 463 aa17.47■□□□□ 0.39
SV2B-204ENST00000553727 GCC1Q96CN9 775 aa17.47■□□□□ 0.39
SV2B-204ENST00000553727 ABCF2Q9UG63 623 aa17.47■□□□□ 0.39
SV2B-204ENST00000553727 PSME4Q14997 1843 aa17.47■□□□□ 0.39
SV2B-204ENST00000553727 LDHBP07195 334 aaKnown RBP17.46■□□□□ 0.39
SV2B-204ENST00000553727 C1QTNF8P60827 252 aa17.46■□□□□ 0.39
SV2B-204ENST00000553727 FSTL1Q12841 308 aa17.46■□□□□ 0.39
SV2B-204ENST00000553727 CFAP100Q494V2 611 aa17.46■□□□□ 0.39
SV2B-204ENST00000553727 ANKRD45Q5TZF3 282 aa17.46■□□□□ 0.39
SV2B-204ENST00000553727 ZGPATQ8N5A5 531 aaKnown RBP17.46■□□□□ 0.39
SV2B-204ENST00000553727 ARAP2Q8WZ64 1704 aa17.46■□□□□ 0.39
SV2B-204ENST00000553727 ZBTB22O15209 634 aa17.45■□□□□ 0.38
SV2B-204ENST00000553727 PRDX5P30044 214 aa17.45■□□□□ 0.38
SV2B-204ENST00000553727 NBPF9Q3BBW0 867 aa17.45■□□□□ 0.38
SV2B-204ENST00000553727 TBC1D9Q6ZT07 1266 aa17.45■□□□□ 0.38
SV2B-204ENST00000553727 CNTROBQ8N137 903 aa17.45■□□□□ 0.38
SV2B-204ENST00000553727 ZC3H15Q8WU90 426 aaKnown RBP17.45■□□□□ 0.38
SV2B-204ENST00000553727 ZNF512BQ96KM6 892 aaPredicted RBP17.45■□□□□ 0.38
SV2B-204ENST00000553727 SUGT1Q9Y2Z0 365 aa17.45■□□□□ 0.38
SV2B-204ENST00000553727 ASTN2O75129 1339 aaPredicted RBP17.45■□□□□ 0.38
SV2B-204ENST00000553727 PDS5AQ29RF7 1337 aaKnown RBP17.45■□□□□ 0.38
SV2B-204ENST00000553727 WNT10BO00744 389 aa17.44■□□□□ 0.38
SV2B-204ENST00000553727 NEFLP07196 543 aa17.44■□□□□ 0.38
SV2B-204ENST00000553727 CRKP46108 304 aa17.44■□□□□ 0.38
SV2B-204ENST00000553727 SPTY2D1Q68D10 685 aaPredicted RBP17.44■□□□□ 0.38
SV2B-204ENST00000553727 B4GALNT3Q6L9W6 998 aa17.44■□□□□ 0.38
SV2B-204ENST00000553727 DCPSQ96C86 337 aaKnown RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms