RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 HACL1Q9UJ83 578 aa17■□□□□ 0.31
TUBB3-202ENST00000553656 ZBTB12Q9Y330 459 aaPredicted RBP17■□□□□ 0.31
TUBB3-202ENST00000553656 PSME4Q14997 1843 aa17■□□□□ 0.31
TUBB3-202ENST00000553656 SCNN1DP51172 638 aa16.99■□□□□ 0.31
TUBB3-202ENST00000553656 TTC39AQ5SRH9 613 aa16.99■□□□□ 0.31
TUBB3-202ENST00000553656 AGBL3Q8NEM8 1001 aa16.99■□□□□ 0.31
TUBB3-202ENST00000553656 DPF2Q92785 391 aa16.99■□□□□ 0.31
TUBB3-202ENST00000553656 EAF2Q96CJ1 260 aaPredicted RBP16.99■□□□□ 0.31
TUBB3-202ENST00000553656 GCC1Q96CN9 775 aa16.99■□□□□ 0.31
TUBB3-202ENST00000553656 CCDC8Q9H0W5 538 aaPredicted RBP16.99■□□□□ 0.31
TUBB3-202ENST00000553656 GPRC5DQ9NZD1 345 aa16.99■□□□□ 0.31
TUBB3-202ENST00000553656 JAG2Q9Y219 1238 aa16.99■□□□□ 0.31
TUBB3-202ENST00000553656 FAM205AQ6ZU69 1335 aa16.98■□□□□ 0.31
TUBB3-202ENST00000553656 H7C1D1 291 aa16.98■□□□□ 0.31
TUBB3-202ENST00000553656 UQCRFS1P1P0C7P4 283 aa16.98■□□□□ 0.31
TUBB3-202ENST00000553656 TBC1D22AQ8WUA7 517 aa16.98■□□□□ 0.31
TUBB3-202ENST00000553656 DBNDD2Q9BQY9 259 aa16.98■□□□□ 0.31
TUBB3-202ENST00000553656 DENND2AQ9ULE3 1009 aa16.98■□□□□ 0.31
TUBB3-202ENST00000553656 SCN4AP35499 1836 aa16.98■□□□□ 0.31
TUBB3-202ENST00000553656 EPHX2P34913 555 aa16.97■□□□□ 0.31
TUBB3-202ENST00000553656 FKBP1AP62942 108 aaKnown RBP16.97■□□□□ 0.31
TUBB3-202ENST00000553656 MFSD14BQ5SR56 506 aa16.97■□□□□ 0.31
TUBB3-202ENST00000553656 MICALL2Q8IY33 904 aa16.97■□□□□ 0.31
TUBB3-202ENST00000553656 OGFOD1Q8N543 542 aa16.97■□□□□ 0.31
TUBB3-202ENST00000553656 WDR66Q8TBY9 1149 aa16.97■□□□□ 0.31
TUBB3-202ENST00000553656 MXD3Q9BW11 206 aa16.97■□□□□ 0.31
TUBB3-202ENST00000553656 CNOT7Q9UIV1 285 aaKnown RBP16.97■□□□□ 0.31
TUBB3-202ENST00000553656 DBNLQ9UJU6 430 aaKnown RBP16.97■□□□□ 0.31
TUBB3-202ENST00000553656 HDAC9Q9UKV0 1011 aa16.97■□□□□ 0.31
TUBB3-202ENST00000553656 USP17L8P0C7I0 530 aa16.96■□□□□ 0.31
TUBB3-202ENST00000553656 TAF1DQ9H5J8 278 aaPredicted RBP16.96■□□□□ 0.31
TUBB3-202ENST00000553656 ADARB2Q9NS39 739 aaKnown RBP16.96■□□□□ 0.31
TUBB3-202ENST00000553656 MYH13Q9UKX3 1938 aa16.96■□□□□ 0.3
TUBB3-202ENST00000553656 SMARCA5O60264 1052 aaPredicted RBP16.95■□□□□ 0.3
TUBB3-202ENST00000553656 EPS15P42566 896 aa16.95■□□□□ 0.3
TUBB3-202ENST00000553656 RASGRF1Q13972 1273 aa16.95■□□□□ 0.3
TUBB3-202ENST00000553656 EAPPQ56P03 285 aaPredicted RBP16.95■□□□□ 0.3
TUBB3-202ENST00000553656 PNMA8AQ86V59 439 aaPredicted RBP16.95■□□□□ 0.3
TUBB3-202ENST00000553656 KIAA0825Q8IV33 1275 aa16.95■□□□□ 0.3
TUBB3-202ENST00000553656 ZGPATQ8N5A5 531 aaKnown RBP16.95■□□□□ 0.3
TUBB3-202ENST00000553656 GPATCH3Q96I76 525 aa16.95■□□□□ 0.3
TUBB3-202ENST00000553656 TLR7Q9NYK1 1049 aaKnown RBP16.95■□□□□ 0.3
TUBB3-202ENST00000553656 POTECB2RU33 542 aa16.94■□□□□ 0.3
TUBB3-202ENST00000553656 ZBTB22O15209 634 aa16.94■□□□□ 0.3
TUBB3-202ENST00000553656 ARID4AP29374 1257 aaPredicted RBP16.94■□□□□ 0.3
TUBB3-202ENST00000553656 MMP14P50281 582 aa16.94■□□□□ 0.3
TUBB3-202ENST00000553656 ANKRD45Q5TZF3 282 aa16.94■□□□□ 0.3
TUBB3-202ENST00000553656 GMLQ99445 158 aa16.94■□□□□ 0.3
TUBB3-202ENST00000553656 PDS5AQ29RF7 1337 aaKnown RBP16.94■□□□□ 0.3
TUBB3-202ENST00000553656 F8W031 263 aaPredicted RBP16.93■□□□□ 0.3
TUBB3-202ENST00000553656 KIF3CO14782 793 aa16.93■□□□□ 0.3
TUBB3-202ENST00000553656 IGHDP01880 384 aa16.93■□□□□ 0.3
TUBB3-202ENST00000553656 USP50Q70EL3 339 aaPredicted RBP16.93■□□□□ 0.3
TUBB3-202ENST00000553656 CERS5Q8N5B7 392 aa16.93■□□□□ 0.3
TUBB3-202ENST00000553656 SPATA5Q8NB90 893 aa16.93■□□□□ 0.3
TUBB3-202ENST00000553656 ZNF512BQ96KM6 892 aaPredicted RBP16.93■□□□□ 0.3
TUBB3-202ENST00000553656 SUGT1Q9Y2Z0 365 aa16.93■□□□□ 0.3
TUBB3-202ENST00000553656 MAST3O60307 1309 aa16.93■□□□□ 0.3
TUBB3-202ENST00000553656 COL1A1P02452 1464 aaPredicted RBP16.93■□□□□ 0.3
TUBB3-202ENST00000553656 ZNF646O15015 1829 aaPredicted RBP16.92■□□□□ 0.3
TUBB3-202ENST00000553656 ZNF280AP59817 542 aaPredicted RBP16.92■□□□□ 0.3
TUBB3-202ENST00000553656 KIF4BQ2VIQ3 1234 aa16.92■□□□□ 0.3
TUBB3-202ENST00000553656 RBM26Q5T8P6 1007 aaKnown RBP16.92■□□□□ 0.3
TUBB3-202ENST00000553656 SMC5Q8IY18 1101 aa16.92■□□□□ 0.3
TUBB3-202ENST00000553656 HMG20BQ9P0W2 317 aa16.92■□□□□ 0.3
TUBB3-202ENST00000553656 TTF2Q9UNY4 1162 aaKnown RBP16.92■□□□□ 0.3
TUBB3-202ENST00000553656 CLEC11AQ9Y240 323 aa16.92■□□□□ 0.3
TUBB3-202ENST00000553656 SHTN1A0MZ66 631 aa16.91■□□□□ 0.3
TUBB3-202ENST00000553656 MCAMP43121 646 aa16.91■□□□□ 0.3
TUBB3-202ENST00000553656 TBC1D10BQ4KMP7 808 aaPredicted RBP16.91■□□□□ 0.3
TUBB3-202ENST00000553656 SPTY2D1Q68D10 685 aaPredicted RBP16.91■□□□□ 0.3
TUBB3-202ENST00000553656 B4GALNT3Q6L9W6 998 aa16.91■□□□□ 0.3
TUBB3-202ENST00000553656 SAMD7Q7Z3H4 446 aa16.91■□□□□ 0.3
TUBB3-202ENST00000553656 MYOZ2Q9NPC6 264 aa16.91■□□□□ 0.3
TUBB3-202ENST00000553656 ABCF2Q9UG63 623 aa16.91■□□□□ 0.3
TUBB3-202ENST00000553656 SALL1Q9NSC2 1324 aa16.91■□□□□ 0.3
TUBB3-202ENST00000553656 TOMM70O94826 608 aa16.9■□□□□ 0.3
TUBB3-202ENST00000553656 LDHBP07195 334 aaKnown RBP16.9■□□□□ 0.3
TUBB3-202ENST00000553656 RBM5P52756 815 aaKnown RBP eCLIP16.9■□□□□ 0.3
TUBB3-202ENST00000553656 SCARF1Q14162 830 aa16.9■□□□□ 0.3
TUBB3-202ENST00000553656 LDHDQ86WU2 507 aa16.9■□□□□ 0.3
TUBB3-202ENST00000553656 SNRKQ9NRH2 765 aa16.9■□□□□ 0.3
TUBB3-202ENST00000553656 DLGAP5Q15398 846 aa16.89■□□□□ 0.29
TUBB3-202ENST00000553656 PI16Q6UXB8 463 aa16.89■□□□□ 0.29
TUBB3-202ENST00000553656 DZIP1Q86YF9 867 aaKnown RBP16.89■□□□□ 0.29
TUBB3-202ENST00000553656 TRPM4Q8TD43 1214 aa16.89■□□□□ 0.29
TUBB3-202ENST00000553656 ECHDC1Q9NTX5 307 aa16.89■□□□□ 0.29
TUBB3-202ENST00000553656 ERICH6Q7L0X2 663 aa16.88■□□□□ 0.29
TUBB3-202ENST00000553656 SMC1BQ8NDV3 1235 aa16.88■□□□□ 0.29
TUBB3-202ENST00000553656 RBM46Q8TBY0 533 aaKnown RBP16.88■□□□□ 0.29
TUBB3-202ENST00000553656 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.88■□□□□ 0.29
TUBB3-202ENST00000553656 LNPKQ9C0E8 428 aa16.88■□□□□ 0.29
TUBB3-202ENST00000553656 LRP2BPQ9P2M1 347 aa16.88■□□□□ 0.29
TUBB3-202ENST00000553656 MYO1BO43795 1136 aa16.87■□□□□ 0.29
TUBB3-202ENST00000553656 ATP5JP18859 108 aa16.87■□□□□ 0.29
TUBB3-202ENST00000553656 PRDX5P30044 214 aa16.87■□□□□ 0.29
TUBB3-202ENST00000553656 ZAP70P43403 619 aa16.87■□□□□ 0.29
TUBB3-202ENST00000553656 CFAP100Q494V2 611 aa16.87■□□□□ 0.29
TUBB3-202ENST00000553656 CHADLQ6NUI6 762 aa16.87■□□□□ 0.29
TUBB3-202ENST00000553656 CHD1LQ86WJ1 897 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms