RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 CERS5Q8N5B7 392 aa16.21■□□□□ 0.19
ACTN1-207ENST00000553290 TDRD7Q8NHU6 1098 aaKnown RBP16.21■□□□□ 0.19
ACTN1-207ENST00000553290 ZBED3Q96IU2 234 aaPredicted RBP16.21■□□□□ 0.19
ACTN1-207ENST00000553290 FAM84BQ96KN1 310 aaPredicted RBP16.21■□□□□ 0.19
ACTN1-207ENST00000553290 BEGAINQ9BUH8 593 aa16.21■□□□□ 0.19
ACTN1-207ENST00000553290 FAM205AQ6ZU69 1335 aa16.2■□□□□ 0.18
ACTN1-207ENST00000553290 AOC2O75106 756 aa16.2■□□□□ 0.18
ACTN1-207ENST00000553290 RFX5P48382 616 aaPredicted RBP16.2■□□□□ 0.18
ACTN1-207ENST00000553290 DLGAP5Q15398 846 aa16.2■□□□□ 0.18
ACTN1-207ENST00000553290 CAVIN4Q5BKX8 364 aa16.2■□□□□ 0.18
ACTN1-207ENST00000553290 INTS3Q68E01 1043 aaKnown RBP16.2■□□□□ 0.18
ACTN1-207ENST00000553290 VPS37DQ86XT2 251 aa16.2■□□□□ 0.18
ACTN1-207ENST00000553290 VGLL2Q8N8G2 317 aa16.2■□□□□ 0.18
ACTN1-207ENST00000553290 MTMR14Q8NCE2 650 aa16.2■□□□□ 0.18
ACTN1-207ENST00000553290 KLHDC4Q8TBB5 520 aa16.2■□□□□ 0.18
ACTN1-207ENST00000553290 EYA2O00167 538 aa16.19■□□□□ 0.18
ACTN1-207ENST00000553290 FKBP1BP68106 108 aa16.19■□□□□ 0.18
ACTN1-207ENST00000553290 PTPN12Q05209 780 aaKnown RBP16.19■□□□□ 0.18
ACTN1-207ENST00000553290 NOGQ13253 232 aa16.19■□□□□ 0.18
ACTN1-207ENST00000553290 RGMBQ6NW40 437 aa16.19■□□□□ 0.18
ACTN1-207ENST00000553290 FBXO33Q7Z6M2 555 aa16.19■□□□□ 0.18
ACTN1-207ENST00000553290 APOBEC3FQ8IUX4 373 aaKnown RBP16.19■□□□□ 0.18
ACTN1-207ENST00000553290 PRDM10Q9NQV6 1147 aa16.19■□□□□ 0.18
ACTN1-207ENST00000553290 FBXO3Q9UK99 471 aa16.19■□□□□ 0.18
ACTN1-207ENST00000553290 GNAI3P08754 354 aa16.18■□□□□ 0.18
ACTN1-207ENST00000553290 PUM3Q15397 648 aaKnown RBP16.18■□□□□ 0.18
ACTN1-207ENST00000553290 CCDC102AQ96A19 550 aa16.18■□□□□ 0.18
ACTN1-207ENST00000553290 LRRFIP2Q9Y608 721 aaKnown RBP16.18■□□□□ 0.18
ACTN1-207ENST00000553290 F8W031 263 aaPredicted RBP16.17■□□□□ 0.18
ACTN1-207ENST00000553290 MYO1BO43795 1136 aa16.17■□□□□ 0.18
ACTN1-207ENST00000553290 BCAR3O75815 825 aa16.17■□□□□ 0.18
ACTN1-207ENST00000553290 IFIT1P09914 478 aaKnown RBP16.17■□□□□ 0.18
ACTN1-207ENST00000553290 TRIM27P14373 513 aa16.17■□□□□ 0.18
ACTN1-207ENST00000553290 NF2P35240 595 aa16.17■□□□□ 0.18
ACTN1-207ENST00000553290 MFSD14BQ5SR56 506 aa16.17■□□□□ 0.18
ACTN1-207ENST00000553290 ATF7IPQ6VMQ6 1270 aa16.17■□□□□ 0.18
ACTN1-207ENST00000553290 TNS4Q8IZW8 715 aa16.17■□□□□ 0.18
ACTN1-207ENST00000553290 FRAT1Q92837 279 aaPredicted RBP16.17■□□□□ 0.18
ACTN1-207ENST00000553290 MEIS3Q99687 375 aa16.17■□□□□ 0.18
ACTN1-207ENST00000553290 SCAF8Q9UPN6 1271 aaKnown RBP16.17■□□□□ 0.18
ACTN1-207ENST00000553290 JAG2Q9Y219 1238 aa16.17■□□□□ 0.18
ACTN1-207ENST00000553290 PAPPA2Q9BXP8 1791 aa16.17■□□□□ 0.18
ACTN1-207ENST00000553290 FRAT2O75474 233 aaPredicted RBP16.16■□□□□ 0.18
ACTN1-207ENST00000553290 CIAO1O76071 339 aa16.16■□□□□ 0.18
ACTN1-207ENST00000553290 FGFR2P21802 821 aa16.16■□□□□ 0.18
ACTN1-207ENST00000553290 ZNF157P51786 506 aaPredicted RBP16.16■□□□□ 0.18
ACTN1-207ENST00000553290 CFAP100Q494V2 611 aa16.16■□□□□ 0.18
ACTN1-207ENST00000553290 ECM29Q5VYK3 1845 aa16.16■□□□□ 0.18
ACTN1-207ENST00000553290 SPDYE2BA6NHP3 402 aa16.15■□□□□ 0.18
ACTN1-207ENST00000553290 FAM155AB1AL88 458 aaPredicted RBP16.15■□□□□ 0.18
ACTN1-207ENST00000553290 CA12O43570 354 aa16.15■□□□□ 0.18
ACTN1-207ENST00000553290 SPDYE6P0CI01 402 aa16.15■□□□□ 0.18
ACTN1-207ENST00000553290 HSPA8P11142 646 aaKnown RBP16.15■□□□□ 0.18
ACTN1-207ENST00000553290 SLC5A1P13866 664 aa16.15■□□□□ 0.18
ACTN1-207ENST00000553290 LBX1P52954 281 aa16.15■□□□□ 0.18
ACTN1-207ENST00000553290 PRAMEF18Q5VWM3 479 aa16.15■□□□□ 0.18
ACTN1-207ENST00000553290 ATG9AQ7Z3C6 839 aa16.15■□□□□ 0.18
ACTN1-207ENST00000553290 TBC1D22AQ8WUA7 517 aa16.15■□□□□ 0.18
ACTN1-207ENST00000553290 LPIN2Q92539 896 aa16.15■□□□□ 0.18
ACTN1-207ENST00000553290 COL1A1P02452 1464 aaPredicted RBP16.15■□□□□ 0.18
ACTN1-207ENST00000553290 ZBED9Q6R2W3 1325 aa16.15■□□□□ 0.18
ACTN1-207ENST00000553290 ARAP2Q8WZ64 1704 aa16.14■□□□□ 0.17
ACTN1-207ENST00000553290 BCAMP50895 628 aa16.14■□□□□ 0.17
ACTN1-207ENST00000553290 RBM5P52756 815 aaKnown RBP eCLIP16.14■□□□□ 0.17
ACTN1-207ENST00000553290 SIL1Q9H173 461 aa16.14■□□□□ 0.17
ACTN1-207ENST00000553290 CEP126Q9P2H0 1117 aa16.14■□□□□ 0.17
ACTN1-207ENST00000553290 SERPINA10Q9UK55 444 aa16.14■□□□□ 0.17
ACTN1-207ENST00000553290 TTF2Q9UNY4 1162 aaKnown RBP16.14■□□□□ 0.17
ACTN1-207ENST00000553290 IQSEC3Q9UPP2 1182 aaPredicted RBP16.14■□□□□ 0.17
ACTN1-207ENST00000553290 SLC10A3P09131 477 aa16.13■□□□□ 0.17
ACTN1-207ENST00000553290 IL15P40933 162 aaPredicted RBP16.13■□□□□ 0.17
ACTN1-207ENST00000553290 CHAF1AQ13111 956 aaPredicted RBP16.13■□□□□ 0.17
ACTN1-207ENST00000553290 TTLL12Q14166 644 aaPredicted RBP16.13■□□□□ 0.17
ACTN1-207ENST00000553290 ZKSCAN2Q63HK3 967 aa16.13■□□□□ 0.17
ACTN1-207ENST00000553290 PRMT6Q96LA8 375 aaPredicted RBP16.13■□□□□ 0.17
ACTN1-207ENST00000553290 COPRSQ9NQ92 184 aa16.13■□□□□ 0.17
ACTN1-207ENST00000553290 PCDHAC2Q9Y5I4 1007 aa16.13■□□□□ 0.17
ACTN1-207ENST00000553290 PPP2R3BQ9Y5P8 575 aa16.13■□□□□ 0.17
ACTN1-207ENST00000553290 MTX1Q13505 466 aa16.12■□□□□ 0.17
ACTN1-207ENST00000553290 CLUAP1Q96AJ1 413 aa16.12■□□□□ 0.17
ACTN1-207ENST00000553290 ZIC5Q96T25 663 aa16.12■□□□□ 0.17
ACTN1-207ENST00000553290 DEFB129Q9H1M3 183 aa16.12■□□□□ 0.17
ACTN1-207ENST00000553290 CLRN2A0PK11 232 aa16.11■□□□□ 0.17
ACTN1-207ENST00000553290 UBE2Q2LH0YL09 131 aa16.11■□□□□ 0.17
ACTN1-207ENST00000553290 GNAI2P04899 355 aa16.11■□□□□ 0.17
ACTN1-207ENST00000553290 HDLBPQ00341 1268 aaKnown RBP16.11■□□□□ 0.17
ACTN1-207ENST00000553290 KIF23Q02241 960 aaPredicted RBP16.11■□□□□ 0.17
ACTN1-207ENST00000553290 ATP2B3Q16720 1220 aa16.11■□□□□ 0.17
ACTN1-207ENST00000553290 ARMC9Q7Z3E5 817 aa16.11■□□□□ 0.17
ACTN1-207ENST00000553290 REM2Q8IYK8 340 aaPredicted RBP16.11■□□□□ 0.17
ACTN1-207ENST00000553290 VEZTQ9HBM0 779 aa16.11■□□□□ 0.17
ACTN1-207ENST00000553290 PA2G4Q9UQ80 394 aaKnown RBP16.11■□□□□ 0.17
ACTN1-207ENST00000553290 TNNQ9UQP3 1299 aa16.11■□□□□ 0.17
ACTN1-207ENST00000553290 SUGT1Q9Y2Z0 365 aa16.11■□□□□ 0.17
ACTN1-207ENST00000553290 SRGAP3O43295 1099 aa16.1■□□□□ 0.17
ACTN1-207ENST00000553290 CRKP46108 304 aa16.1■□□□□ 0.17
ACTN1-207ENST00000553290 TNFAIP1Q13829 316 aa16.1■□□□□ 0.17
ACTN1-207ENST00000553290 MOB2Q70IA6 237 aa16.1■□□□□ 0.17
ACTN1-207ENST00000553290 RASAL3Q86YV0 1011 aa16.1■□□□□ 0.17
ACTN1-207ENST00000553290 DZIP1LQ8IYY4 767 aaKnown RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms