RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 ZNF646O15015 1829 aaPredicted RBP19.95■□□□□ 0.78
CDK4-215ENST00000553237 FAM84BQ96KN1 310 aaPredicted RBP19.94■□□□□ 0.78
CDK4-215ENST00000553237 API5Q9BZZ5 524 aaKnown RBP19.94■□□□□ 0.78
CDK4-215ENST00000553237 CAPN15O75808 1086 aa19.93■□□□□ 0.78
CDK4-215ENST00000553237 HIBADHP31937 336 aaKnown RBP19.93■□□□□ 0.78
CDK4-215ENST00000553237 MMP14P50281 582 aa19.93■□□□□ 0.78
CDK4-215ENST00000553237 BRPF1P55201 1214 aaPredicted RBP19.93■□□□□ 0.78
CDK4-215ENST00000553237 TSKSQ9UJT2 592 aa19.93■□□□□ 0.78
CDK4-215ENST00000553237 ZNF157P51786 506 aaPredicted RBP19.92■□□□□ 0.78
CDK4-215ENST00000553237 DLGAP5Q15398 846 aa19.92■□□□□ 0.78
CDK4-215ENST00000553237 TDRD7Q8NHU6 1098 aaKnown RBP19.92■□□□□ 0.78
CDK4-215ENST00000553237 PCDHAC2Q9Y5I4 1007 aa19.92■□□□□ 0.78
CDK4-215ENST00000553237 THSD7BQ9C0I4 1608 aa19.91■□□□□ 0.78
CDK4-215ENST00000553237 UBTFL1P0CB47 393 aaPredicted RBP19.91■□□□□ 0.78
CDK4-215ENST00000553237 NOGQ13253 232 aa19.91■□□□□ 0.78
CDK4-215ENST00000553237 MOB2Q70IA6 237 aa19.91■□□□□ 0.78
CDK4-215ENST00000553237 ZBED3Q96IU2 234 aaPredicted RBP19.91■□□□□ 0.78
CDK4-215ENST00000553237 FAM155AB1AL88 458 aaPredicted RBP19.9■□□□□ 0.78
CDK4-215ENST00000553237 PDE8BO95263 885 aa19.9■□□□□ 0.78
CDK4-215ENST00000553237 RFX5P48382 616 aaPredicted RBP19.9■□□□□ 0.78
CDK4-215ENST00000553237 FKBP1AP62942 108 aaKnown RBP19.9■□□□□ 0.78
CDK4-215ENST00000553237 CFAP100Q494V2 611 aa19.9■□□□□ 0.78
CDK4-215ENST00000553237 VPS37DQ86XT2 251 aa19.9■□□□□ 0.78
CDK4-215ENST00000553237 CCDC102AQ96A19 550 aa19.9■□□□□ 0.78
CDK4-215ENST00000553237 IQSEC3Q9UPP2 1182 aaPredicted RBP19.9■□□□□ 0.78
CDK4-215ENST00000553237 UBE2Q2LH0YL09 131 aa19.89■□□□□ 0.77
CDK4-215ENST00000553237 HNRNPUQ00839 825 aaKnown RBP eCLIP19.89■□□□□ 0.77
CDK4-215ENST00000553237 TTLL12Q14166 644 aaPredicted RBP19.89■□□□□ 0.77
CDK4-215ENST00000553237 MFSD14BQ5SR56 506 aa19.89■□□□□ 0.77
CDK4-215ENST00000553237 FAM205AQ6ZU69 1335 aa19.89■□□□□ 0.77
CDK4-215ENST00000553237 FBXO33Q7Z6M2 555 aa19.89■□□□□ 0.77
CDK4-215ENST00000553237 VGLL2Q8N8G2 317 aa19.89■□□□□ 0.77
CDK4-215ENST00000553237 EYA2O00167 538 aa19.88■□□□□ 0.77
CDK4-215ENST00000553237 RBM5P52756 815 aaKnown RBP eCLIP19.88■□□□□ 0.77
CDK4-215ENST00000553237 KIF23Q02241 960 aaPredicted RBP19.88■□□□□ 0.77
CDK4-215ENST00000553237 PTPN12Q05209 780 aaKnown RBP19.88■□□□□ 0.77
CDK4-215ENST00000553237 APOBEC3FQ8IUX4 373 aaKnown RBP19.88■□□□□ 0.77
CDK4-215ENST00000553237 MTMR14Q8NCE2 650 aa19.88■□□□□ 0.77
CDK4-215ENST00000553237 LRRFIP2Q9Y608 721 aaKnown RBP19.88■□□□□ 0.77
CDK4-215ENST00000553237 KIF16BQ96L93 1317 aa19.87■□□□□ 0.77
CDK4-215ENST00000553237 CLRN2A0PK11 232 aa19.87■□□□□ 0.77
CDK4-215ENST00000553237 FRAT2O75474 233 aaPredicted RBP19.87■□□□□ 0.77
CDK4-215ENST00000553237 BCAR3O75815 825 aa19.87■□□□□ 0.77
CDK4-215ENST00000553237 BCAMP50895 628 aa19.87■□□□□ 0.77
CDK4-215ENST00000553237 FKBP1BP68106 108 aa19.87■□□□□ 0.77
CDK4-215ENST00000553237 CHAF1AQ13111 956 aaPredicted RBP19.87■□□□□ 0.77
CDK4-215ENST00000553237 PRKG1Q13976 671 aa19.87■□□□□ 0.77
CDK4-215ENST00000553237 CAVIN4Q5BKX8 364 aa19.87■□□□□ 0.77
CDK4-215ENST00000553237 ARHGAP45Q92619 1136 aa19.87■□□□□ 0.77
CDK4-215ENST00000553237 PRMT6Q96LA8 375 aaPredicted RBP19.87■□□□□ 0.77
CDK4-215ENST00000553237 MEIS3Q99687 375 aa19.87■□□□□ 0.77
CDK4-215ENST00000553237 SIL1Q9H173 461 aa19.87■□□□□ 0.77
CDK4-215ENST00000553237 AOX1Q06278 1338 aa19.86■□□□□ 0.77
CDK4-215ENST00000553237 SPDYE2BA6NHP3 402 aa19.86■□□□□ 0.77
CDK4-215ENST00000553237 SLC10A3P09131 477 aa19.86■□□□□ 0.77
CDK4-215ENST00000553237 SPDYE6P0CI01 402 aa19.86■□□□□ 0.77
CDK4-215ENST00000553237 NF2P35240 595 aa19.86■□□□□ 0.77
CDK4-215ENST00000553237 FRAT1Q92837 279 aaPredicted RBP19.86■□□□□ 0.77
CDK4-215ENST00000553237 TTF2Q9UNY4 1162 aaKnown RBP19.86■□□□□ 0.77
CDK4-215ENST00000553237 PUM3Q15397 648 aaKnown RBP19.85■□□□□ 0.77
CDK4-215ENST00000553237 RASAL3Q86YV0 1011 aa19.85■□□□□ 0.77
CDK4-215ENST00000553237 DEFB129Q9H1M3 183 aa19.85■□□□□ 0.77
CDK4-215ENST00000553237 VEZTQ9HBM0 779 aa19.85■□□□□ 0.77
CDK4-215ENST00000553237 TNNQ9UQP3 1299 aa19.85■□□□□ 0.77
CDK4-215ENST00000553237 IPO8O15397 1037 aaKnown RBP19.84■□□□□ 0.77
CDK4-215ENST00000553237 CA12O43570 354 aa19.84■□□□□ 0.77
CDK4-215ENST00000553237 MYO1BO43795 1136 aa19.84■□□□□ 0.77
CDK4-215ENST00000553237 IFIT1P09914 478 aaKnown RBP19.84■□□□□ 0.77
CDK4-215ENST00000553237 FGFR2P21802 821 aa19.84■□□□□ 0.77
CDK4-215ENST00000553237 GRIK5Q16478 980 aa19.84■□□□□ 0.77
CDK4-215ENST00000553237 INTS3Q68E01 1043 aaKnown RBP19.84■□□□□ 0.77
CDK4-215ENST00000553237 ATG9AQ7Z3C6 839 aa19.84■□□□□ 0.77
CDK4-215ENST00000553237 HDAC5Q9UQL6 1122 aa19.84■□□□□ 0.77
CDK4-215ENST00000553237 PAPPA2Q9BXP8 1791 aa19.83■□□□□ 0.77
CDK4-215ENST00000553237 FZD1Q9UP38 647 aa19.83■□□□□ 0.77
CDK4-215ENST00000553237 PA2G4Q9UQ80 394 aaKnown RBP19.83■□□□□ 0.77
CDK4-215ENST00000553237 SLC5A1P13866 664 aa19.82■□□□□ 0.76
CDK4-215ENST00000553237 TRIM27P14373 513 aa19.82■□□□□ 0.76
CDK4-215ENST00000553237 CLUAP1Q96AJ1 413 aa19.82■□□□□ 0.76
CDK4-215ENST00000553237 CSRNP1Q96S65 589 aa19.82■□□□□ 0.76
CDK4-215ENST00000553237 ATF7IPQ6VMQ6 1270 aa19.81■□□□□ 0.76
CDK4-215ENST00000553237 ARMC9Q7Z3E5 817 aa19.81■□□□□ 0.76
CDK4-215ENST00000553237 LPIN2Q92539 896 aa19.81■□□□□ 0.76
CDK4-215ENST00000553237 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.81■□□□□ 0.76
CDK4-215ENST00000553237 CEP126Q9P2H0 1117 aa19.81■□□□□ 0.76
CDK4-215ENST00000553237 SERPINA10Q9UK55 444 aa19.81■□□□□ 0.76
CDK4-215ENST00000553237 ANGEL1Q9UNK9 670 aaKnown RBP19.81■□□□□ 0.76
CDK4-215ENST00000553237 CIAO1O76071 339 aa19.8■□□□□ 0.76
CDK4-215ENST00000553237 GNAI3P08754 354 aa19.8■□□□□ 0.76
CDK4-215ENST00000553237 CRKP46108 304 aa19.8■□□□□ 0.76
CDK4-215ENST00000553237 MKRN3Q13064 507 aaKnown RBP19.8■□□□□ 0.76
CDK4-215ENST00000553237 DZIP1LQ8IYY4 767 aaKnown RBP19.8■□□□□ 0.76
CDK4-215ENST00000553237 TBC1D22AQ8WUA7 517 aa19.8■□□□□ 0.76
CDK4-215ENST00000553237 TDRD3Q9H7E2 651 aaKnown RBP19.8■□□□□ 0.76
CDK4-215ENST00000553237 ZNF70Q9UC06 446 aaPredicted RBP19.8■□□□□ 0.76
CDK4-215ENST00000553237 TRPA1O75762 1119 aa19.79■□□□□ 0.76
CDK4-215ENST00000553237 RASA3Q14644 834 aa19.79■□□□□ 0.76
CDK4-215ENST00000553237 RNF186Q9NXI6 227 aa19.79■□□□□ 0.76
CDK4-215ENST00000553237 FBXO3Q9UK99 471 aa19.79■□□□□ 0.76
CDK4-215ENST00000553237 PPP2R3BQ9Y5P8 575 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms