RNA–Protein interactions for RNA: ENST00000552973.1

NEK3-204, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-204ENST00000552973 IL1R1P14778 569 aa14.52□□□□□ -0.09
NEK3-204ENST00000552973 MMP14P50281 582 aa14.52□□□□□ -0.09
NEK3-204ENST00000552973 CFAP100Q494V2 611 aa14.52□□□□□ -0.09
NEK3-204ENST00000552973 C15orf52Q6ZUT6 534 aaKnown RBP14.52□□□□□ -0.09
NEK3-204ENST00000552973 ARMC9Q7Z3E5 817 aa14.52□□□□□ -0.09
NEK3-204ENST00000552973 REM2Q8IYK8 340 aaPredicted RBP14.52□□□□□ -0.09
NEK3-204ENST00000552973 DEFB129Q9H1M3 183 aa14.52□□□□□ -0.09
NEK3-204ENST00000552973 ANGEL1Q9UNK9 670 aaKnown RBP14.52□□□□□ -0.09
NEK3-204ENST00000552973 SPEF2Q9C093 1822 aa14.52□□□□□ -0.09
NEK3-204ENST00000552973 AOX1Q06278 1338 aa14.51□□□□□ -0.09
NEK3-204ENST00000552973 NBPF7P0C2Y1 421 aaPredicted RBP14.51□□□□□ -0.09
NEK3-204ENST00000552973 GYG1P46976 350 aa14.51□□□□□ -0.09
NEK3-204ENST00000552973 RGS19P49795 217 aa14.51□□□□□ -0.09
NEK3-204ENST00000552973 RBM5P52756 815 aaKnown RBP eCLIP14.51□□□□□ -0.09
NEK3-204ENST00000552973 KAZALD1Q96I82 304 aa14.51□□□□□ -0.09
NEK3-204ENST00000552973 PRMT6Q96LA8 375 aaPredicted RBP14.51□□□□□ -0.09
NEK3-204ENST00000552973 VEZTQ9HBM0 779 aa14.51□□□□□ -0.09
NEK3-204ENST00000552973 CASP8AP2Q9UKL3 1982 aa14.51□□□□□ -0.09
NEK3-204ENST00000552973 PAPPA2Q9BXP8 1791 aa14.5□□□□□ -0.09
NEK3-204ENST00000552973 CTU1Q7Z7A3 348 aaKnown RBP14.49□□□□□ -0.09
NEK3-204ENST00000552973 MRPL50Q8N5N7 158 aaKnown RBP14.49□□□□□ -0.09
NEK3-204ENST00000552973 PSME4Q14997 1843 aa14.48□□□□□ -0.09
NEK3-204ENST00000552973 ZNF521Q96K83 1311 aa14.48□□□□□ -0.09
NEK3-204ENST00000552973 SPDYE2BA6NHP3 402 aa14.48□□□□□ -0.09
NEK3-204ENST00000552973 MYO1BO43795 1136 aa14.48□□□□□ -0.09
NEK3-204ENST00000552973 SPDYE6P0CI01 402 aa14.48□□□□□ -0.09
NEK3-204ENST00000552973 HIBADHP31937 336 aaKnown RBP14.48□□□□□ -0.09
NEK3-204ENST00000552973 TM4SF4P48230 202 aa14.48□□□□□ -0.09
NEK3-204ENST00000552973 SOX10P56693 466 aa14.48□□□□□ -0.09
NEK3-204ENST00000552973 UBE4AQ14139 1066 aa14.48□□□□□ -0.09
NEK3-204ENST00000552973 LDLRAD1Q5T700 205 aa14.48□□□□□ -0.09
NEK3-204ENST00000552973 MTMR14Q8NCE2 650 aa14.48□□□□□ -0.09
NEK3-204ENST00000552973 ZNF296Q8WUU4 475 aaPredicted RBP14.48□□□□□ -0.09
NEK3-204ENST00000552973 SLC10A4Q96EP9 437 aa14.48□□□□□ -0.09
NEK3-204ENST00000552973 FAM84BQ96KN1 310 aaPredicted RBP14.48□□□□□ -0.09
NEK3-204ENST00000552973 BICC1Q9H694 974 aaKnown RBP14.48□□□□□ -0.09
NEK3-204ENST00000552973 MYH3P11055 1940 aa14.48□□□□□ -0.09
NEK3-204ENST00000552973 FKBP1AP62942 108 aaKnown RBP14.47□□□□□ -0.09
NEK3-204ENST00000552973 LRRC24Q50LG9 513 aa14.47□□□□□ -0.09
NEK3-204ENST00000552973 MFSD14BQ5SR56 506 aa14.47□□□□□ -0.09
NEK3-204ENST00000552973 NBPF12Q5TAG4 269 aaPredicted RBP14.47□□□□□ -0.09
NEK3-204ENST00000552973 SPRYD7Q5W111 196 aa14.47□□□□□ -0.09
NEK3-204ENST00000552973 TDRD7Q8NHU6 1098 aaKnown RBP14.47□□□□□ -0.09
NEK3-204ENST00000552973 CLMNQ96JQ2 1002 aa14.47□□□□□ -0.09
NEK3-204ENST00000552973 R3HDMLQ9H3Y0 253 aa14.47□□□□□ -0.09
NEK3-204ENST00000552973 TTF2Q9UNY4 1162 aaKnown RBP14.47□□□□□ -0.09
NEK3-204ENST00000552973 IQSEC3Q9UPP2 1182 aaPredicted RBP14.47□□□□□ -0.09
NEK3-204ENST00000552973 RIPOR2Q9Y4F9 1068 aa14.47□□□□□ -0.09
NEK3-204ENST00000552973 GPR25O00155 361 aa14.46□□□□□ -0.09
NEK3-204ENST00000552973 PPP1R12BO60237 982 aaPredicted RBP14.46□□□□□ -0.09
NEK3-204ENST00000552973 SREBF2Q12772 1141 aa14.46□□□□□ -0.09
NEK3-204ENST00000552973 RASA3Q14644 834 aa14.46□□□□□ -0.09
NEK3-204ENST00000552973 KLHDC4Q8TBB5 520 aa14.46□□□□□ -0.09
NEK3-204ENST00000552973 SSH1Q8WYL5 1049 aa14.46□□□□□ -0.09
NEK3-204ENST00000552973 TDRD3Q9H7E2 651 aaKnown RBP14.46□□□□□ -0.09
NEK3-204ENST00000552973 UTYO14607 1347 aa14.45□□□□□ -0.1
NEK3-204ENST00000552973 FAM205AQ6ZU69 1335 aa14.45□□□□□ -0.1
NEK3-204ENST00000552973 CHAF1AQ13111 956 aaPredicted RBP14.45□□□□□ -0.1
NEK3-204ENST00000552973 GRIK5Q16478 980 aa14.45□□□□□ -0.1
NEK3-204ENST00000552973 SUPT20HL1Q3ZLR7 823 aa14.45□□□□□ -0.1
NEK3-204ENST00000552973 METTL24Q5JXM2 366 aa14.45□□□□□ -0.1
NEK3-204ENST00000552973 ANKRD44Q8N8A2 993 aa14.45□□□□□ -0.1
NEK3-204ENST00000552973 ZNF646O15015 1829 aaPredicted RBP14.45□□□□□ -0.1
NEK3-204ENST00000552973 MROH5Q6ZUA9 1318 aa14.44□□□□□ -0.1
NEK3-204ENST00000552973 USP2O75604 605 aaPredicted RBP14.44□□□□□ -0.1
NEK3-204ENST00000552973 MAP3K11Q16584 847 aa14.44□□□□□ -0.1
NEK3-204ENST00000552973 RABL6Q3YEC7 729 aaPredicted RBP14.44□□□□□ -0.1
NEK3-204ENST00000552973 VPS37DQ86XT2 251 aa14.44□□□□□ -0.1
NEK3-204ENST00000552973 ZNF70Q9UC06 446 aaPredicted RBP14.44□□□□□ -0.1
NEK3-204ENST00000552973 HPS5Q9UPZ3 1129 aa14.44□□□□□ -0.1
NEK3-204ENST00000552973 PPP2R3BQ9Y5P8 575 aa14.44□□□□□ -0.1
NEK3-204ENST00000552973 SSC5DA1L4H1 1573 aa14.43□□□□□ -0.1
NEK3-204ENST00000552973 TCP10L2B9ZVM9 353 aa14.43□□□□□ -0.1
NEK3-204ENST00000552973 E9PSI1 815 aa14.43□□□□□ -0.1
NEK3-204ENST00000552973 FRAT2O75474 233 aaPredicted RBP14.43□□□□□ -0.1
NEK3-204ENST00000552973 FBXO33Q7Z6M2 555 aa14.43□□□□□ -0.1
NEK3-204ENST00000552973 CDAN1Q8IWY9 1227 aa14.43□□□□□ -0.1
NEK3-204ENST00000552973 DZIP1LQ8IYY4 767 aaKnown RBP14.43□□□□□ -0.1
NEK3-204ENST00000552973 CDCA7LQ96GN5 454 aa14.43□□□□□ -0.1
NEK3-204ENST00000552973 WNK4Q96J92 1243 aa14.43□□□□□ -0.1
NEK3-204ENST00000552973 USP44Q9H0E7 712 aa14.43□□□□□ -0.1
NEK3-204ENST00000552973 MANSC4A6NHS7 340 aaPredicted RBP14.42□□□□□ -0.1
NEK3-204ENST00000552973 CRKP46108 304 aa14.42□□□□□ -0.1
NEK3-204ENST00000552973 IREB2P48200 963 aaKnown RBP14.42□□□□□ -0.1
NEK3-204ENST00000552973 BCAMP50895 628 aa14.42□□□□□ -0.1
NEK3-204ENST00000552973 SLFN5Q08AF3 891 aa14.42□□□□□ -0.1
NEK3-204ENST00000552973 SPDYE2Q495Y8 402 aa14.42□□□□□ -0.1
NEK3-204ENST00000552973 CAVIN4Q5BKX8 364 aa14.42□□□□□ -0.1
NEK3-204ENST00000552973 IFNL1Q8IU54 200 aa14.42□□□□□ -0.1
NEK3-204ENST00000552973 SERPINA10Q9UK55 444 aa14.42□□□□□ -0.1
NEK3-204ENST00000552973 COL1A1P02452 1464 aaPredicted RBP14.42□□□□□ -0.1
NEK3-204ENST00000552973 PTPRCP08575 1304 aa14.41□□□□□ -0.1
NEK3-204ENST00000552973 FKTNO75072 461 aa14.41□□□□□ -0.1
NEK3-204ENST00000552973 PDE8BO95263 885 aa14.41□□□□□ -0.1
NEK3-204ENST00000552973 GJA5P36382 358 aa14.41□□□□□ -0.1
NEK3-204ENST00000552973 ELP3Q9H9T3 547 aa14.41□□□□□ -0.1
NEK3-204ENST00000552973 IGF2BP3O00425 579 aaKnown RBP eCLIP14.4□□□□□ -0.1
NEK3-204ENST00000552973 ALDH1A1P00352 501 aa14.4□□□□□ -0.1
NEK3-204ENST00000552973 ZBTB48P10074 688 aaPredicted RBP14.4□□□□□ -0.1
NEK3-204ENST00000552973 CACNB3P54284 484 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms