RNA–Protein interactions for RNA: ENST00000552620.1

CHMP4A-210, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 716 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-210ENST00000552620 TECPR2O15040 1411 aa7.38□□□□□ -1.23
CHMP4A-210ENST00000552620 NCOA3Q9Y6Q9 1424 aa7.38□□□□□ -1.23
CHMP4A-210ENST00000552620 SERTM1A2A2V5 107 aa7.38□□□□□ -1.23
CHMP4A-210ENST00000552620 MEN1O00255 615 aa7.38□□□□□ -1.23
CHMP4A-210ENST00000552620 GDF9O60383 454 aa7.38□□□□□ -1.23
CHMP4A-210ENST00000552620 CDC45O75419 566 aa7.38□□□□□ -1.23
CHMP4A-210ENST00000552620 HMOX1P09601 288 aa7.38□□□□□ -1.23
CHMP4A-210ENST00000552620 ARHGAP4P98171 946 aa7.38□□□□□ -1.23
CHMP4A-210ENST00000552620 ALKBH2Q6NS38 261 aa7.38□□□□□ -1.23
CHMP4A-210ENST00000552620 RPAP2Q8IXW5 612 aaPredicted RBP7.38□□□□□ -1.23
CHMP4A-210ENST00000552620 GBP4Q96PP9 640 aa7.38□□□□□ -1.23
CHMP4A-210ENST00000552620 DCTPP1Q9H773 170 aa7.38□□□□□ -1.23
CHMP4A-210ENST00000552620 MAP2P11137 1827 aaKnown RBP7.38□□□□□ -1.23
CHMP4A-210ENST00000552620 TNFRSF10AO00220 468 aa7.37□□□□□ -1.23
CHMP4A-210ENST00000552620 HSP90AB1P08238 724 aaKnown RBP7.37□□□□□ -1.23
CHMP4A-210ENST00000552620 NPR3P17342 541 aa7.37□□□□□ -1.23
CHMP4A-210ENST00000552620 MRE11P49959 708 aa7.37□□□□□ -1.23
CHMP4A-210ENST00000552620 CENPCQ03188 943 aa7.37□□□□□ -1.23
CHMP4A-210ENST00000552620 TEAD4Q15561 434 aa7.37□□□□□ -1.23
CHMP4A-210ENST00000552620 NME9Q86XW9 330 aa7.37□□□□□ -1.23
CHMP4A-210ENST00000552620 TSPYL6Q8N831 410 aa7.37□□□□□ -1.23
CHMP4A-210ENST00000552620 C8orf58Q8NAV2 365 aa7.37□□□□□ -1.23
CHMP4A-210ENST00000552620 ASB16Q96NS5 453 aa7.37□□□□□ -1.23
CHMP4A-210ENST00000552620 IQSEC3Q9UPP2 1182 aaPredicted RBP7.37□□□□□ -1.23
CHMP4A-210ENST00000552620 HRH3Q9Y5N1 445 aa7.37□□□□□ -1.23
CHMP4A-210ENST00000552620 KIAA0232Q92628 1395 aa7.36□□□□□ -1.23
CHMP4A-210ENST00000552620 PTPRCP08575 1304 aa7.36□□□□□ -1.23
CHMP4A-210ENST00000552620 J3QL48 77 aa7.36□□□□□ -1.23
CHMP4A-210ENST00000552620 CHL1O00533 1208 aa7.36□□□□□ -1.23
CHMP4A-210ENST00000552620 NDUFB5O43674 189 aa7.36□□□□□ -1.23
CHMP4A-210ENST00000552620 MPSTP25325 297 aa7.36□□□□□ -1.23
CHMP4A-210ENST00000552620 RELBQ01201 579 aa7.36□□□□□ -1.23
CHMP4A-210ENST00000552620 RAB3GAP1Q15042 981 aa7.36□□□□□ -1.23
CHMP4A-210ENST00000552620 CLEC17AQ6ZS10 378 aa7.36□□□□□ -1.23
CHMP4A-210ENST00000552620 SIRT2Q8IXJ6 389 aa7.36□□□□□ -1.23
CHMP4A-210ENST00000552620 ABTB2Q8N961 1025 aa7.36□□□□□ -1.23
CHMP4A-210ENST00000552620 KDF1Q8NAX2 398 aaPredicted RBP7.36□□□□□ -1.23
CHMP4A-210ENST00000552620 MYO19Q96H55 970 aa7.36□□□□□ -1.23
CHMP4A-210ENST00000552620 ZSCAN10Q96SZ4 725 aaPredicted RBP7.36□□□□□ -1.23
CHMP4A-210ENST00000552620 THUMPD2Q9BTF0 503 aaKnown RBP7.36□□□□□ -1.23
CHMP4A-210ENST00000552620 KLF16Q9BXK1 252 aaPredicted RBP7.36□□□□□ -1.23
CHMP4A-210ENST00000552620 ZFAND3Q9H8U3 227 aa7.36□□□□□ -1.23
CHMP4A-210ENST00000552620 STIM2Q9P246 746 aa7.36□□□□□ -1.23
CHMP4A-210ENST00000552620 ZNF232Q9UNY5 417 aa7.36□□□□□ -1.23
CHMP4A-210ENST00000552620 SETD1AO15047 1707 aaKnown RBP7.35□□□□□ -1.23
CHMP4A-210ENST00000552620 METP08581 1390 aa7.35□□□□□ -1.23
CHMP4A-210ENST00000552620 K7ELQ4 463 aaPredicted RBP7.35□□□□□ -1.23
CHMP4A-210ENST00000552620 XRCC6P12956 609 aaKnown RBP eCLIP7.35□□□□□ -1.23
CHMP4A-210ENST00000552620 TIMP2P16035 220 aa7.35□□□□□ -1.23
CHMP4A-210ENST00000552620 FBLN1P23142 703 aa7.35□□□□□ -1.23
CHMP4A-210ENST00000552620 NOS2P35228 1153 aa7.35□□□□□ -1.23
CHMP4A-210ENST00000552620 HIRAP54198 1017 aaPredicted RBP7.35□□□□□ -1.23
CHMP4A-210ENST00000552620 RABEP1Q15276 862 aa7.35□□□□□ -1.23
CHMP4A-210ENST00000552620 ECM1Q16610 540 aa7.35□□□□□ -1.23
CHMP4A-210ENST00000552620 TMEM214Q6NUQ4 689 aaKnown RBP7.35□□□□□ -1.23
CHMP4A-210ENST00000552620 POTEAQ6S8J7 498 aa7.35□□□□□ -1.23
CHMP4A-210ENST00000552620 NPAS4Q8IUM7 802 aa7.35□□□□□ -1.23
CHMP4A-210ENST00000552620 ANKRD44Q8N8A2 993 aa7.35□□□□□ -1.23
CHMP4A-210ENST00000552620 AGBL1Q96MI9 1066 aa7.35□□□□□ -1.23
CHMP4A-210ENST00000552620 KIF2CQ99661 725 aa7.35□□□□□ -1.23
CHMP4A-210ENST00000552620 NIFKQ9BYG3 293 aaKnown RBP7.35□□□□□ -1.23
CHMP4A-210ENST00000552620 FHDC1Q9C0D6 1143 aaPredicted RBP7.35□□□□□ -1.23
CHMP4A-210ENST00000552620 SAP130Q9H0E3 1048 aa7.35□□□□□ -1.23
CHMP4A-210ENST00000552620 KNDC1Q76NI1 1749 aa7.35□□□□□ -1.23
CHMP4A-210ENST00000552620 RIMBP3CA6NJZ7 1639 aa7.34□□□□□ -1.23
CHMP4A-210ENST00000552620 RIMBP3BA6NNM3 1639 aa7.34□□□□□ -1.23
CHMP4A-210ENST00000552620 RIMBP3Q9UFD9 1639 aa7.34□□□□□ -1.23
CHMP4A-210ENST00000552620 TTC21BQ7Z4L5 1316 aa7.34□□□□□ -1.23
CHMP4A-210ENST00000552620 GOLGA6L22H0YM25 854 aa7.34□□□□□ -1.23
CHMP4A-210ENST00000552620 EML1O00423 815 aa7.34□□□□□ -1.23
CHMP4A-210ENST00000552620 HSP90AA1P07900 732 aaKnown RBP7.34□□□□□ -1.23
CHMP4A-210ENST00000552620 BRD2P25440 801 aaKnown RBP7.34□□□□□ -1.23
CHMP4A-210ENST00000552620 NOM1Q5C9Z4 860 aaKnown RBP7.34□□□□□ -1.23
CHMP4A-210ENST00000552620 GNASQ5JWF2 1037 aa7.34□□□□□ -1.23
CHMP4A-210ENST00000552620 COX20Q5RI15 118 aa7.34□□□□□ -1.23
CHMP4A-210ENST00000552620 TTC22Q5TAA0 569 aa7.34□□□□□ -1.23
CHMP4A-210ENST00000552620 CYB5RLQ6IPT4 315 aa7.34□□□□□ -1.23
CHMP4A-210ENST00000552620 CASC1Q6TDU7 716 aa7.34□□□□□ -1.23
CHMP4A-210ENST00000552620 RGL4Q8IZJ4 473 aa7.34□□□□□ -1.23
CHMP4A-210ENST00000552620 GIPC2Q8TF65 315 aa7.34□□□□□ -1.23
CHMP4A-210ENST00000552620 TNPO1Q92973 898 aaKnown RBP7.34□□□□□ -1.23
CHMP4A-210ENST00000552620 NGLY1Q96IV0 654 aa7.34□□□□□ -1.23
CHMP4A-210ENST00000552620 RBCK1Q9BYM8 510 aa7.34□□□□□ -1.23
CHMP4A-210ENST00000552620 QTRT2Q9H974 415 aaKnown RBP7.34□□□□□ -1.23
CHMP4A-210ENST00000552620 CWC22Q9HCG8 908 aaKnown RBP7.34□□□□□ -1.23
CHMP4A-210ENST00000552620 TOR4AQ9NXH8 423 aa7.34□□□□□ -1.23
CHMP4A-210ENST00000552620 USP3Q9Y6I4 520 aa7.34□□□□□ -1.23
CHMP4A-210ENST00000552620 USP31Q70CQ4 1352 aa7.33□□□□□ -1.24
CHMP4A-210ENST00000552620 MON2Q7Z3U7 1717 aa7.33□□□□□ -1.24
CHMP4A-210ENST00000552620 ELL2O00472 640 aaPredicted RBP7.33□□□□□ -1.24
CHMP4A-210ENST00000552620 LCE2BO14633 110 aa7.33□□□□□ -1.24
CHMP4A-210ENST00000552620 HTATSF1O43719 755 aaKnown RBP7.33□□□□□ -1.24
CHMP4A-210ENST00000552620 HMMRO75330 724 aa7.33□□□□□ -1.24
CHMP4A-210ENST00000552620 DGAT1O75907 488 aa7.33□□□□□ -1.24
CHMP4A-210ENST00000552620 ZNF16P17020 682 aaPredicted RBP7.33□□□□□ -1.24
CHMP4A-210ENST00000552620 GPC1P35052 558 aa7.33□□□□□ -1.24
CHMP4A-210ENST00000552620 EIF1AXP47813 144 aaKnown RBP7.33□□□□□ -1.24
CHMP4A-210ENST00000552620 NUCB2P80303 420 aa7.33□□□□□ -1.24
CHMP4A-210ENST00000552620 EIF4A2Q14240 407 aaKnown RBP7.33□□□□□ -1.24
CHMP4A-210ENST00000552620 COL19A1Q14993 1142 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms