RNA–Protein interactions for RNA: ENST00000552213.1

CHPT1-207, Transcript of choline phosphotransferase 1, humanhuman

TSL 3

Gene CHPT1, Length 598 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-207ENST00000552213 ZNF609O15014 1411 aa16.15■□□□□ 0.18
CHPT1-207ENST00000552213 EPS15P42566 896 aa16.15■□□□□ 0.18
CHPT1-207ENST00000552213 PHKA1P46020 1223 aa16.15■□□□□ 0.18
CHPT1-207ENST00000552213 EAPPQ56P03 285 aaPredicted RBP16.15■□□□□ 0.18
CHPT1-207ENST00000552213 CCDC102BQ68D86 513 aa16.15■□□□□ 0.18
CHPT1-207ENST00000552213 MICALL2Q8IY33 904 aa16.15■□□□□ 0.18
CHPT1-207ENST00000552213 CLASRPQ8N2M8 674 aaKnown RBP16.15■□□□□ 0.18
CHPT1-207ENST00000552213 TAF1DQ9H5J8 278 aaPredicted RBP16.15■□□□□ 0.18
CHPT1-207ENST00000552213 DCTPP1Q9H773 170 aa16.15■□□□□ 0.18
CHPT1-207ENST00000552213 USP17L8P0C7I0 530 aa16.14■□□□□ 0.17
CHPT1-207ENST00000552213 AACSQ86V21 672 aa16.14■□□□□ 0.17
CHPT1-207ENST00000552213 LRRCC1Q9C099 1032 aa16.14■□□□□ 0.17
CHPT1-207ENST00000552213 CCDC8Q9H0W5 538 aaPredicted RBP16.14■□□□□ 0.17
CHPT1-207ENST00000552213 FAM205AQ6ZU69 1335 aa16.14■□□□□ 0.17
CHPT1-207ENST00000552213 CCDC158Q5M9N0 1113 aa16.13■□□□□ 0.17
CHPT1-207ENST00000552213 MFSD14BQ5SR56 506 aa16.13■□□□□ 0.17
CHPT1-207ENST00000552213 PNMA8AQ86V59 439 aaPredicted RBP16.13■□□□□ 0.17
CHPT1-207ENST00000552213 OGFOD1Q8N543 542 aa16.13■□□□□ 0.17
CHPT1-207ENST00000552213 EAF2Q96CJ1 260 aaPredicted RBP16.13■□□□□ 0.17
CHPT1-207ENST00000552213 DBNDD2Q9BQY9 259 aa16.13■□□□□ 0.17
CHPT1-207ENST00000552213 ADARB2Q9NS39 739 aaKnown RBP16.13■□□□□ 0.17
CHPT1-207ENST00000552213 WDR90Q96KV7 1748 aa16.12■□□□□ 0.17
CHPT1-207ENST00000552213 SHTN1A0MZ66 631 aa16.12■□□□□ 0.17
CHPT1-207ENST00000552213 SEMA3EO15041 775 aa16.12■□□□□ 0.17
CHPT1-207ENST00000552213 IFIT2P09913 472 aaKnown RBP16.12■□□□□ 0.17
CHPT1-207ENST00000552213 HDAC1Q13547 482 aaPredicted RBP16.12■□□□□ 0.17
CHPT1-207ENST00000552213 TTC39AQ5SRH9 613 aa16.12■□□□□ 0.17
CHPT1-207ENST00000552213 RBM26Q5T8P6 1007 aaKnown RBP16.12■□□□□ 0.17
CHPT1-207ENST00000552213 KIAA0825Q8IV33 1275 aa16.12■□□□□ 0.17
CHPT1-207ENST00000552213 TBC1D22AQ8WUA7 517 aa16.12■□□□□ 0.17
CHPT1-207ENST00000552213 GMLQ99445 158 aa16.12■□□□□ 0.17
CHPT1-207ENST00000552213 RWDD1Q9H446 243 aaPredicted RBP16.12■□□□□ 0.17
CHPT1-207ENST00000552213 ZBTB47Q9UFB7 747 aaPredicted RBP16.12■□□□□ 0.17
CHPT1-207ENST00000552213 HDAC9Q9UKV0 1011 aa16.12■□□□□ 0.17
CHPT1-207ENST00000552213 DENND2AQ9ULE3 1009 aa16.12■□□□□ 0.17
CHPT1-207ENST00000552213 CLEC11AQ9Y240 323 aa16.12■□□□□ 0.17
CHPT1-207ENST00000552213 F8W031 263 aaPredicted RBP16.11■□□□□ 0.17
CHPT1-207ENST00000552213 TOMM70O94826 608 aa16.11■□□□□ 0.17
CHPT1-207ENST00000552213 UQCRFS1P1P0C7P4 283 aa16.11■□□□□ 0.17
CHPT1-207ENST00000552213 FKBP1AP62942 108 aaKnown RBP16.11■□□□□ 0.17
CHPT1-207ENST00000552213 USP50Q70EL3 339 aaPredicted RBP16.11■□□□□ 0.17
CHPT1-207ENST00000552213 CERS5Q8N5B7 392 aa16.11■□□□□ 0.17
CHPT1-207ENST00000552213 WDR66Q8TBY9 1149 aa16.11■□□□□ 0.17
CHPT1-207ENST00000552213 TLR7Q9NYK1 1049 aaKnown RBP16.11■□□□□ 0.17
CHPT1-207ENST00000552213 DBNLQ9UJU6 430 aaKnown RBP16.11■□□□□ 0.17
CHPT1-207ENST00000552213 SCN9AQ15858 1988 aa16.11■□□□□ 0.17
CHPT1-207ENST00000552213 SMARCA5O60264 1052 aaPredicted RBP16.1■□□□□ 0.17
CHPT1-207ENST00000552213 NEFLP07196 543 aa16.1■□□□□ 0.17
CHPT1-207ENST00000552213 RASGRF1Q13972 1273 aa16.1■□□□□ 0.17
CHPT1-207ENST00000552213 TBC1D10BQ4KMP7 808 aaPredicted RBP16.1■□□□□ 0.17
CHPT1-207ENST00000552213 SAMD7Q7Z3H4 446 aa16.1■□□□□ 0.17
CHPT1-207ENST00000552213 ZNF280AP59817 542 aaPredicted RBP16.09■□□□□ 0.17
CHPT1-207ENST00000552213 KIF4BQ2VIQ3 1234 aa16.09■□□□□ 0.17
CHPT1-207ENST00000552213 LDHDQ86WU2 507 aa16.09■□□□□ 0.17
CHPT1-207ENST00000552213 TRPM4Q8TD43 1214 aa16.09■□□□□ 0.17
CHPT1-207ENST00000552213 GCC1Q96CN9 775 aa16.09■□□□□ 0.17
CHPT1-207ENST00000552213 POTEIP0CG38 1075 aa16.08■□□□□ 0.16
CHPT1-207ENST00000552213 POTEJP0CG39 1038 aa16.08■□□□□ 0.16
CHPT1-207ENST00000552213 ARID4AP29374 1257 aaPredicted RBP16.08■□□□□ 0.16
CHPT1-207ENST00000552213 MMP14P50281 582 aa16.08■□□□□ 0.16
CHPT1-207ENST00000552213 SPATA5Q8NB90 893 aa16.08■□□□□ 0.16
CHPT1-207ENST00000552213 RBM46Q8TBY0 533 aaKnown RBP16.08■□□□□ 0.16
CHPT1-207ENST00000552213 MYOZ2Q9NPC6 264 aa16.08■□□□□ 0.16
CHPT1-207ENST00000552213 TTF2Q9UNY4 1162 aaKnown RBP16.08■□□□□ 0.16
CHPT1-207ENST00000552213 ZBTB22O15209 634 aa16.07■□□□□ 0.16
CHPT1-207ENST00000552213 RBM5P52756 815 aaKnown RBP eCLIP16.07■□□□□ 0.16
CHPT1-207ENST00000552213 ANKRD45Q5TZF3 282 aa16.07■□□□□ 0.16
CHPT1-207ENST00000552213 ZGPATQ8N5A5 531 aaKnown RBP16.07■□□□□ 0.16
CHPT1-207ENST00000552213 SMC1BQ8NDV3 1235 aa16.07■□□□□ 0.16
CHPT1-207ENST00000552213 HMG20BQ9P0W2 317 aa16.07■□□□□ 0.16
CHPT1-207ENST00000552213 ABCF2Q9UG63 623 aa16.07■□□□□ 0.16
CHPT1-207ENST00000552213 SCN4AP35499 1836 aa16.06■□□□□ 0.16
CHPT1-207ENST00000552213 COL1A1P02452 1464 aaPredicted RBP16.06■□□□□ 0.16
CHPT1-207ENST00000552213 PDS5AQ29RF7 1337 aaKnown RBP16.06■□□□□ 0.16
CHPT1-207ENST00000552213 EGFRP00533 1210 aa16.06■□□□□ 0.16
CHPT1-207ENST00000552213 IGHDP01880 384 aa16.06■□□□□ 0.16
CHPT1-207ENST00000552213 MCAMP43121 646 aa16.06■□□□□ 0.16
CHPT1-207ENST00000552213 HIRAP54198 1017 aaPredicted RBP16.06■□□□□ 0.16
CHPT1-207ENST00000552213 SCARF1Q14162 830 aa16.06■□□□□ 0.16
CHPT1-207ENST00000552213 DLGAP5Q15398 846 aa16.06■□□□□ 0.16
CHPT1-207ENST00000552213 CHADLQ6NUI6 762 aa16.06■□□□□ 0.16
CHPT1-207ENST00000552213 PI16Q6UXB8 463 aa16.06■□□□□ 0.16
CHPT1-207ENST00000552213 ZNF512BQ96KM6 892 aaPredicted RBP16.06■□□□□ 0.16
CHPT1-207ENST00000552213 SNRKQ9NRH2 765 aa16.06■□□□□ 0.16
CHPT1-207ENST00000552213 SUGT1Q9Y2Z0 365 aa16.06■□□□□ 0.16
CHPT1-207ENST00000552213 MAST3O60307 1309 aa16.05■□□□□ 0.16
CHPT1-207ENST00000552213 LDHBP07195 334 aaKnown RBP16.05■□□□□ 0.16
CHPT1-207ENST00000552213 GRIK5Q16478 980 aa16.05■□□□□ 0.16
CHPT1-207ENST00000552213 SPTY2D1Q68D10 685 aaPredicted RBP16.05■□□□□ 0.16
CHPT1-207ENST00000552213 ZC3H15Q8WU90 426 aaKnown RBP16.05■□□□□ 0.16
CHPT1-207ENST00000552213 GPATCH3Q96I76 525 aa16.05■□□□□ 0.16
CHPT1-207ENST00000552213 ARAP2Q8WZ64 1704 aa16.05■□□□□ 0.16
CHPT1-207ENST00000552213 SALL1Q9NSC2 1324 aa16.04■□□□□ 0.16
CHPT1-207ENST00000552213 FSTL1Q12841 308 aa16.04■□□□□ 0.16
CHPT1-207ENST00000552213 CFAP100Q494V2 611 aa16.04■□□□□ 0.16
CHPT1-207ENST00000552213 MAP1SQ66K74 1059 aaPredicted RBP16.04■□□□□ 0.16
CHPT1-207ENST00000552213 B4GALNT3Q6L9W6 998 aa16.04■□□□□ 0.16
CHPT1-207ENST00000552213 DZIP1Q86YF9 867 aaKnown RBP16.04■□□□□ 0.16
CHPT1-207ENST00000552213 SERPINA10Q9UK55 444 aa16.04■□□□□ 0.16
CHPT1-207ENST00000552213 PRDX5P30044 214 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms