RNA–Protein interactions for RNA: ENST00000551748.5

RPH3A-222, Transcript of rabphilin 3A, human

TSL 4

Gene RPH3A, Length 557 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPH3A-222	ENST00000551748	PUS3	Q9BZE2	481 aa	Known RBP	21.53	■■□□□ 1.04
RPH3A-222	ENST00000551748	HDAC9	Q9UKV0	1011 aa		21.53	■■□□□ 1.04
RPH3A-222	ENST00000551748	CCER2	I3L3R5	266 aa		21.52	■■□□□ 1.04
RPH3A-222	ENST00000551748	FKBP1B	P68106	108 aa		21.52	■■□□□ 1.04
RPH3A-222	ENST00000551748	COL1A1	P02452	1464 aa	Predicted RBP	21.52	■■□□□ 1.03
RPH3A-222	ENST00000551748	PRAMEF18	Q5VWM3	479 aa		21.51	■■□□□ 1.03
RPH3A-222	ENST00000551748	RIPOR2	Q9Y4F9	1068 aa		21.51	■■□□□ 1.03
RPH3A-222	ENST00000551748	FKBP1A	P62942	108 aa	Known RBP	21.5	■■□□□ 1.03
RPH3A-222	ENST00000551748	UBE4A	Q14139	1066 aa		21.5	■■□□□ 1.03
RPH3A-222	ENST00000551748	MOB2	Q70IA6	237 aa		21.5	■■□□□ 1.03
RPH3A-222	ENST00000551748	RASAL3	Q86YV0	1011 aa		21.5	■■□□□ 1.03
RPH3A-222	ENST00000551748	USP44	Q9H0E7	712 aa		21.5	■■□□□ 1.03
RPH3A-222	ENST00000551748	KIF23	Q02241	960 aa	Predicted RBP	21.49	■■□□□ 1.03
RPH3A-222	ENST00000551748	APOBEC3F	Q8IUX4	373 aa	Known RBP	21.49	■■□□□ 1.03
RPH3A-222	ENST00000551748	MTMR14	Q8NCE2	650 aa		21.49	■■□□□ 1.03
RPH3A-222	ENST00000551748	SMC4	Q9NTJ3	1288 aa		21.49	■■□□□ 1.03
RPH3A-222	ENST00000551748	MROH5	Q6ZUA9	1318 aa		21.49	■■□□□ 1.03
RPH3A-222	ENST00000551748	OTOF	Q9HC10	1997 aa		21.48	■■□□□ 1.03
RPH3A-222	ENST00000551748	JAG2	Q9Y219	1238 aa		21.48	■■□□□ 1.03
RPH3A-222	ENST00000551748	PCDHAC2	Q9Y5I4	1007 aa		21.48	■■□□□ 1.03
RPH3A-222	ENST00000551748	FAM205A	Q6ZU69	1335 aa		21.48	■■□□□ 1.03
RPH3A-222	ENST00000551748		F8W031	263 aa	Predicted RBP	21.47	■■□□□ 1.03
RPH3A-222	ENST00000551748	GYG1	P46976	350 aa		21.47	■■□□□ 1.03
RPH3A-222	ENST00000551748	DLGAP5	Q15398	846 aa		21.47	■■□□□ 1.03
RPH3A-222	ENST00000551748	LRRC24	Q50LG9	513 aa		21.47	■■□□□ 1.03
RPH3A-222	ENST00000551748	VGLL2	Q8N8G2	317 aa		21.47	■■□□□ 1.03
RPH3A-222	ENST00000551748	TDRD7	Q8NHU6	1098 aa	Known RBP	21.47	■■□□□ 1.03
RPH3A-222	ENST00000551748	FAM84B	Q96KN1	310 aa	Predicted RBP	21.47	■■□□□ 1.03
RPH3A-222	ENST00000551748	SSC5D	A1L4H1	1573 aa		21.47	■■□□□ 1.03
RPH3A-222	ENST00000551748	CT47B1	P0C2W7	299 aa	Predicted RBP	21.46	■■□□□ 1.03
RPH3A-222	ENST00000551748	SAGE1	Q9NXZ1	904 aa		21.46	■■□□□ 1.03
RPH3A-222	ENST00000551748	SPDYE2B	A6NHP3	402 aa		21.45	■■□□□ 1.02
RPH3A-222	ENST00000551748	UBE2Q2L	H0YL09	131 aa		21.45	■■□□□ 1.02
RPH3A-222	ENST00000551748	SPDYE6	P0CI01	402 aa		21.45	■■□□□ 1.02
RPH3A-222	ENST00000551748	HIBADH	P31937	336 aa	Known RBP	21.45	■■□□□ 1.02
RPH3A-222	ENST00000551748	KLHDC4	Q8TBB5	520 aa		21.45	■■□□□ 1.02
RPH3A-222	ENST00000551748	ABHD8	Q96I13	439 aa		21.45	■■□□□ 1.02
RPH3A-222	ENST00000551748	CSRNP1	Q96S65	589 aa		21.45	■■□□□ 1.02
RPH3A-222	ENST00000551748	NF2	P35240	595 aa		21.44	■■□□□ 1.02
RPH3A-222	ENST00000551748	CFAP100	Q494V2	611 aa		21.44	■■□□□ 1.02
RPH3A-222	ENST00000551748	AOX1	Q06278	1338 aa		21.44	■■□□□ 1.02
RPH3A-222	ENST00000551748	METTL24	Q5JXM2	366 aa		21.43	■■□□□ 1.02
RPH3A-222	ENST00000551748	MFSD14B	Q5SR56	506 aa		21.43	■■□□□ 1.02
RPH3A-222	ENST00000551748	PDE8B	O95263	885 aa		21.42	■■□□□ 1.02
RPH3A-222	ENST00000551748	RFX5	P48382	616 aa	Predicted RBP	21.42	■■□□□ 1.02
RPH3A-222	ENST00000551748	TTLL12	Q14166	644 aa	Predicted RBP	21.42	■■□□□ 1.02
RPH3A-222	ENST00000551748	FBXO33	Q7Z6M2	555 aa		21.42	■■□□□ 1.02
RPH3A-222	ENST00000551748	PRMT6	Q96LA8	375 aa	Predicted RBP	21.42	■■□□□ 1.02
RPH3A-222	ENST00000551748	DEFB129	Q9H1M3	183 aa		21.42	■■□□□ 1.02
RPH3A-222	ENST00000551748	RNF186	Q9NXI6	227 aa		21.42	■■□□□ 1.02
RPH3A-222	ENST00000551748	CLRN2	A0PK11	232 aa		21.41	■■□□□ 1.02
RPH3A-222	ENST00000551748	NOB1	Q9ULX3	412 aa	Known RBP	21.41	■■□□□ 1.02
RPH3A-222	ENST00000551748	MYO1B	O43795	1136 aa		21.4	■■□□□ 1.02
RPH3A-222	ENST00000551748	TRPA1	O75762	1119 aa		21.4	■■□□□ 1.02
RPH3A-222	ENST00000551748	REM2	Q8IYK8	340 aa	Predicted RBP	21.4	■■□□□ 1.02
RPH3A-222	ENST00000551748	PPP2R3B	Q9Y5P8	575 aa		21.4	■■□□□ 1.02
RPH3A-222	ENST00000551748	KIF16B	Q96L93	1317 aa		21.39	■■□□□ 1.01
RPH3A-222	ENST00000551748	FGFR2	P21802	821 aa		21.39	■■□□□ 1.01
RPH3A-222	ENST00000551748	PTPN12	Q05209	780 aa	Known RBP	21.39	■■□□□ 1.01
RPH3A-222	ENST00000551748	PRKG1	Q13976	671 aa		21.39	■■□□□ 1.01
RPH3A-222	ENST00000551748	ARMC9	Q7Z3E5	817 aa		21.39	■■□□□ 1.01
RPH3A-222	ENST00000551748	TTF2	Q9UNY4	1162 aa	Known RBP	21.39	■■□□□ 1.01
RPH3A-222	ENST00000551748	FZD1	Q9UP38	647 aa		21.39	■■□□□ 1.01
RPH3A-222	ENST00000551748	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	21.39	■■□□□ 1.01
RPH3A-222	ENST00000551748	UBTFL1	P0CB47	393 aa	Predicted RBP	21.38	■■□□□ 1.01
RPH3A-222	ENST00000551748	RBM5	P52756	815 aa	Known RBP eCLIP	21.38	■■□□□ 1.01
RPH3A-222	ENST00000551748	RARS	P54136	660 aa	Known RBP	21.38	■■□□□ 1.01
RPH3A-222	ENST00000551748	LDLRAD1	Q5T700	205 aa		21.38	■■□□□ 1.01
RPH3A-222	ENST00000551748	VPS37D	Q86XT2	251 aa		21.38	■■□□□ 1.01
RPH3A-222	ENST00000551748	API5	Q9BZZ5	524 aa	Known RBP	21.38	■■□□□ 1.01
RPH3A-222	ENST00000551748	MCOLN1	Q9GZU1	580 aa		21.38	■■□□□ 1.01
RPH3A-222	ENST00000551748	VEZT	Q9HBM0	779 aa		21.38	■■□□□ 1.01
RPH3A-222	ENST00000551748	SERPINA10	Q9UK55	444 aa		21.38	■■□□□ 1.01
RPH3A-222	ENST00000551748	EYA2	O00167	538 aa		21.37	■■□□□ 1.01
RPH3A-222	ENST00000551748	PUM3	Q15397	648 aa	Known RBP	21.37	■■□□□ 1.01
RPH3A-222	ENST00000551748	GRIK5	Q16478	980 aa		21.37	■■□□□ 1.01
RPH3A-222	ENST00000551748	MAP3K11	Q16584	847 aa		21.37	■■□□□ 1.01
RPH3A-222	ENST00000551748	CAVIN4	Q5BKX8	364 aa		21.37	■■□□□ 1.01
RPH3A-222	ENST00000551748	ANGEL1	Q9UNK9	670 aa	Known RBP	21.37	■■□□□ 1.01
RPH3A-222	ENST00000551748	BCAM	P50895	628 aa		21.36	■■□□□ 1.01
RPH3A-222	ENST00000551748	SPDYE2	Q495Y8	402 aa		21.36	■■□□□ 1.01
RPH3A-222	ENST00000551748	ATG9A	Q7Z3C6	839 aa		21.36	■■□□□ 1.01
RPH3A-222	ENST00000551748	CHAF1A	Q13111	956 aa	Predicted RBP	21.35	■■□□□ 1.01
RPH3A-222	ENST00000551748	DGKZ	Q13574	1117 aa		21.35	■■□□□ 1.01
RPH3A-222	ENST00000551748	CRK	P46108	304 aa		21.34	■■□□□ 1.01
RPH3A-222	ENST00000551748	MKRN3	Q13064	507 aa	Known RBP	21.34	■■□□□ 1.01
RPH3A-222	ENST00000551748	RASA3	Q14644	834 aa		21.34	■■□□□ 1.01
RPH3A-222	ENST00000551748	NBPF12	Q5TAG4	269 aa	Predicted RBP	21.34	■■□□□ 1.01
RPH3A-222	ENST00000551748	DZIP1L	Q8IYY4	767 aa	Known RBP	21.34	■■□□□ 1.01
RPH3A-222	ENST00000551748	TBC1D22A	Q8WUA7	517 aa		21.34	■■□□□ 1.01
RPH3A-222	ENST00000551748	MEIS3	Q99687	375 aa		21.34	■■□□□ 1.01
RPH3A-222	ENST00000551748	TDRD3	Q9H7E2	651 aa	Known RBP	21.34	■■□□□ 1.01
RPH3A-222	ENST00000551748	ZNF70	Q9UC06	446 aa	Predicted RBP	21.34	■■□□□ 1.01
RPH3A-222	ENST00000551748	LRRFIP2	Q9Y608	721 aa	Known RBP	21.34	■■□□□ 1.01
RPH3A-222	ENST00000551748	FRAT2	O75474	233 aa	Predicted RBP	21.33	■■□□□ 1.01
RPH3A-222	ENST00000551748	IFIT1	P09914	478 aa	Known RBP	21.33	■■□□□ 1.01
RPH3A-222	ENST00000551748	TM4SF4	P48230	202 aa		21.33	■■□□□ 1.01
RPH3A-222	ENST00000551748	FBXO3	Q9UK99	471 aa		21.33	■■□□□ 1.01
RPH3A-222	ENST00000551748	PPP1R12B	O60237	982 aa	Predicted RBP	21.32	■■□□□ 1
RPH3A-222	ENST00000551748	TNFAIP1	Q13829	316 aa		21.32	■■□□□ 1

Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms