RNA–Protein interactions for RNA: ENST00000551339.5

PFKM-222, Transcript of phosphofructokinase, muscle, human

TSL 4

Gene PFKM, Length 526 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PFKM-222	ENST00000551339	HSPA8	P11142	646 aa	Known RBP	12.11	□□□□□ -0.47
PFKM-222	ENST00000551339	LBX1	P52954	281 aa		12.11	□□□□□ -0.47
PFKM-222	ENST00000551339	FKBP1A	P62942	108 aa	Known RBP	12.11	□□□□□ -0.47
PFKM-222	ENST00000551339	RGMB	Q6NW40	437 aa		12.11	□□□□□ -0.47
PFKM-222	ENST00000551339	TDRD7	Q8NHU6	1098 aa	Known RBP	12.11	□□□□□ -0.47
PFKM-222	ENST00000551339	KLHDC4	Q8TBB5	520 aa		12.11	□□□□□ -0.47
PFKM-222	ENST00000551339	FAM84B	Q96KN1	310 aa	Predicted RBP	12.11	□□□□□ -0.47
PFKM-222	ENST00000551339	HDAC9	Q9UKV0	1011 aa		12.11	□□□□□ -0.47
PFKM-222	ENST00000551339	FAM155A	B1AL88	458 aa	Predicted RBP	12.1	□□□□□ -0.47
PFKM-222	ENST00000551339	BCAR3	O75815	825 aa		12.1	□□□□□ -0.47
PFKM-222	ENST00000551339	HIBADH	P31937	336 aa	Known RBP	12.1	□□□□□ -0.47
PFKM-222	ENST00000551339	GYG1	P46976	350 aa		12.1	□□□□□ -0.47
PFKM-222	ENST00000551339	RFX5	P48382	616 aa	Predicted RBP	12.1	□□□□□ -0.47
PFKM-222	ENST00000551339	PRAMEF18	Q5VWM3	479 aa		12.1	□□□□□ -0.47
PFKM-222	ENST00000551339	INTS3	Q68E01	1043 aa	Known RBP	12.1	□□□□□ -0.47
PFKM-222	ENST00000551339	ZIC5	Q96T25	663 aa		12.1	□□□□□ -0.47
PFKM-222	ENST00000551339	JAG2	Q9Y219	1238 aa		12.1	□□□□□ -0.47
PFKM-222	ENST00000551339	FAM205A	Q6ZU69	1335 aa		12.1	□□□□□ -0.47
PFKM-222	ENST00000551339	THSD7B	Q9C0I4	1608 aa		12.09	□□□□□ -0.47
PFKM-222	ENST00000551339	PDE8B	O95263	885 aa		12.09	□□□□□ -0.47
PFKM-222	ENST00000551339	NOG	Q13253	232 aa		12.09	□□□□□ -0.47
PFKM-222	ENST00000551339	METTL24	Q5JXM2	366 aa		12.09	□□□□□ -0.47
PFKM-222	ENST00000551339	ATF7IP	Q6VMQ6	1270 aa		12.09	□□□□□ -0.47
PFKM-222	ENST00000551339	FBXO33	Q7Z6M2	555 aa		12.09	□□□□□ -0.47
PFKM-222	ENST00000551339	VGLL2	Q8N8G2	317 aa		12.09	□□□□□ -0.47
PFKM-222	ENST00000551339	MTMR14	Q8NCE2	650 aa		12.09	□□□□□ -0.47
PFKM-222	ENST00000551339	CCDC102A	Q96A19	550 aa		12.09	□□□□□ -0.47
PFKM-222	ENST00000551339	BEGAIN	Q9BUH8	593 aa		12.09	□□□□□ -0.47
PFKM-222	ENST00000551339	HDAC5	Q9UQL6	1122 aa		12.09	□□□□□ -0.47
PFKM-222	ENST00000551339		A0A1B0GUL6	1792 aa		12.09	□□□□□ -0.47
PFKM-222	ENST00000551339		F8W031	263 aa	Predicted RBP	12.08	□□□□□ -0.48
PFKM-222	ENST00000551339	ZNF157	P51786	506 aa	Predicted RBP	12.08	□□□□□ -0.48
PFKM-222	ENST00000551339	FKBP1B	P68106	108 aa		12.08	□□□□□ -0.48
PFKM-222	ENST00000551339	DLGAP5	Q15398	846 aa		12.08	□□□□□ -0.48
PFKM-222	ENST00000551339	MOB2	Q70IA6	237 aa		12.08	□□□□□ -0.48
PFKM-222	ENST00000551339	PCDHAC2	Q9Y5I4	1007 aa		12.08	□□□□□ -0.48
PFKM-222	ENST00000551339	EYA2	O00167	538 aa		12.07	□□□□□ -0.48
PFKM-222	ENST00000551339	UBTFL1	P0CB47	393 aa	Predicted RBP	12.07	□□□□□ -0.48
PFKM-222	ENST00000551339	TRIM27	P14373	513 aa		12.07	□□□□□ -0.48
PFKM-222	ENST00000551339	PTPN12	Q05209	780 aa	Known RBP	12.07	□□□□□ -0.48
PFKM-222	ENST00000551339	CFAP100	Q494V2	611 aa		12.07	□□□□□ -0.48
PFKM-222	ENST00000551339	ZKSCAN2	Q63HK3	967 aa		12.07	□□□□□ -0.48
PFKM-222	ENST00000551339	FRAT1	Q92837	279 aa	Predicted RBP	12.07	□□□□□ -0.48
PFKM-222	ENST00000551339	PRMT6	Q96LA8	375 aa	Predicted RBP	12.07	□□□□□ -0.48
PFKM-222	ENST00000551339	UBE2Q2L	H0YL09	131 aa		12.06	□□□□□ -0.48
PFKM-222	ENST00000551339	CA12	O43570	354 aa		12.06	□□□□□ -0.48
PFKM-222	ENST00000551339	SLC10A3	P09131	477 aa		12.06	□□□□□ -0.48
PFKM-222	ENST00000551339	FGFR2	P21802	821 aa		12.06	□□□□□ -0.48
PFKM-222	ENST00000551339	KIF23	Q02241	960 aa	Predicted RBP	12.06	□□□□□ -0.48
PFKM-222	ENST00000551339	MFSD14B	Q5SR56	506 aa		12.06	□□□□□ -0.48
PFKM-222	ENST00000551339	ATG9A	Q7Z3C6	839 aa		12.06	□□□□□ -0.48
PFKM-222	ENST00000551339	APOBEC3F	Q8IUX4	373 aa	Known RBP	12.06	□□□□□ -0.48
PFKM-222	ENST00000551339	TSKS	Q9UJT2	592 aa		12.06	□□□□□ -0.48
PFKM-222	ENST00000551339	SPDYE2B	A6NHP3	402 aa		12.05	□□□□□ -0.48
PFKM-222	ENST00000551339	SPDYE6	P0CI01	402 aa		12.05	□□□□□ -0.48
PFKM-222	ENST00000551339	BCAM	P50895	628 aa		12.05	□□□□□ -0.48
PFKM-222	ENST00000551339	CAVIN4	Q5BKX8	364 aa		12.05	□□□□□ -0.48
PFKM-222	ENST00000551339	VPS37D	Q86XT2	251 aa		12.05	□□□□□ -0.48
PFKM-222	ENST00000551339	MEIS3	Q99687	375 aa		12.05	□□□□□ -0.48
PFKM-222	ENST00000551339	DEFB129	Q9H1M3	183 aa		12.05	□□□□□ -0.48
PFKM-222	ENST00000551339	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	12.05	□□□□□ -0.48
PFKM-222	ENST00000551339	LRRFIP2	Q9Y608	721 aa	Known RBP	12.05	□□□□□ -0.48
PFKM-222	ENST00000551339	AOX1	Q06278	1338 aa		12.05	□□□□□ -0.48
PFKM-222	ENST00000551339	CLRN2	A0PK11	232 aa		12.04	□□□□□ -0.48
PFKM-222	ENST00000551339	GNAI3	P08754	354 aa		12.04	□□□□□ -0.48
PFKM-222	ENST00000551339	NF2	P35240	595 aa		12.04	□□□□□ -0.48
PFKM-222	ENST00000551339	PUM3	Q15397	648 aa	Known RBP	12.04	□□□□□ -0.48
PFKM-222	ENST00000551339	GRIK5	Q16478	980 aa		12.04	□□□□□ -0.48
PFKM-222	ENST00000551339	RASAL3	Q86YV0	1011 aa		12.04	□□□□□ -0.48
PFKM-222	ENST00000551339	CSRNP1	Q96S65	589 aa		12.04	□□□□□ -0.48
PFKM-222	ENST00000551339	SERPINA10	Q9UK55	444 aa		12.04	□□□□□ -0.48
PFKM-222	ENST00000551339	FBXO3	Q9UK99	471 aa		12.04	□□□□□ -0.48
PFKM-222	ENST00000551339	TTF2	Q9UNY4	1162 aa	Known RBP	12.04	□□□□□ -0.48
PFKM-222	ENST00000551339	MYO1B	O43795	1136 aa		12.03	□□□□□ -0.48
PFKM-222	ENST00000551339	CIAO1	O76071	339 aa		12.03	□□□□□ -0.48
PFKM-222	ENST00000551339	IFIT1	P09914	478 aa	Known RBP	12.03	□□□□□ -0.48
PFKM-222	ENST00000551339	RBM5	P52756	815 aa	Known RBP eCLIP	12.03	□□□□□ -0.48
PFKM-222	ENST00000551339	CHAF1A	Q13111	956 aa	Predicted RBP	12.03	□□□□□ -0.48
PFKM-222	ENST00000551339	TTLL12	Q14166	644 aa	Predicted RBP	12.03	□□□□□ -0.48
PFKM-222	ENST00000551339	LPIN2	Q92539	896 aa		12.03	□□□□□ -0.48
PFKM-222	ENST00000551339	COPRS	Q9NQ92	184 aa		12.03	□□□□□ -0.48
PFKM-222	ENST00000551339	TNN	Q9UQP3	1299 aa		12.03	□□□□□ -0.48
PFKM-222	ENST00000551339	PAPPA2	Q9BXP8	1791 aa		12.02	□□□□□ -0.48
PFKM-222	ENST00000551339	FRAT2	O75474	233 aa	Predicted RBP	12.02	□□□□□ -0.49
PFKM-222	ENST00000551339	MS4A1	P11836	297 aa		12.02	□□□□□ -0.49
PFKM-222	ENST00000551339	SLC5A1	P13866	664 aa		12.02	□□□□□ -0.49
PFKM-222	ENST00000551339	CRK	P46108	304 aa		12.02	□□□□□ -0.49
PFKM-222	ENST00000551339	PRKG1	Q13976	671 aa		12.02	□□□□□ -0.49
PFKM-222	ENST00000551339	LDLRAD1	Q5T700	205 aa		12.02	□□□□□ -0.49
PFKM-222	ENST00000551339	ARMC9	Q7Z3E5	817 aa		12.02	□□□□□ -0.49
PFKM-222	ENST00000551339	REM2	Q8IYK8	340 aa	Predicted RBP	12.02	□□□□□ -0.49
PFKM-222	ENST00000551339	DZIP1L	Q8IYY4	767 aa	Known RBP	12.02	□□□□□ -0.49
PFKM-222	ENST00000551339	TBC1D22A	Q8WUA7	517 aa		12.02	□□□□□ -0.49
PFKM-222	ENST00000551339	CLUAP1	Q96AJ1	413 aa		12.02	□□□□□ -0.49
PFKM-222	ENST00000551339	SIL1	Q9H173	461 aa		12.02	□□□□□ -0.49
PFKM-222	ENST00000551339	RNF186	Q9NXI6	227 aa		12.02	□□□□□ -0.49
PFKM-222	ENST00000551339	CEP126	Q9P2H0	1117 aa		12.02	□□□□□ -0.49
PFKM-222	ENST00000551339	RCAN3	Q9UKA8	241 aa		12.02	□□□□□ -0.49
PFKM-222	ENST00000551339	PA2G4	Q9UQ80	394 aa	Known RBP	12.02	□□□□□ -0.49
PFKM-222	ENST00000551339	PPP2R3B	Q9Y5P8	575 aa		12.02	□□□□□ -0.49

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