RNA–Protein interactions for RNA: ENST00000551301.1

SLC48A1-208, Transcript of solute carrier family 48 member 1, humanhuman

TSL 2

Gene SLC48A1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-208ENST00000551301 API5Q9BZZ5 524 aaKnown RBP25.46■■□□□ 1.67
SLC48A1-208ENST00000551301 A0A1B0GUL6 1792 aa25.46■■□□□ 1.67
SLC48A1-208ENST00000551301 TTLL12Q14166 644 aaPredicted RBP25.45■■□□□ 1.66
SLC48A1-208ENST00000551301 ANKRD44Q8N8A2 993 aa25.45■■□□□ 1.66
SLC48A1-208ENST00000551301 PUS3Q9BZE2 481 aaKnown RBP25.45■■□□□ 1.66
SLC48A1-208ENST00000551301 RIPOR2Q9Y4F9 1068 aa25.45■■□□□ 1.66
SLC48A1-208ENST00000551301 ZNF646O15015 1829 aaPredicted RBP25.43■■□□□ 1.66
SLC48A1-208ENST00000551301 CAVIN4Q5BKX8 364 aa25.43■■□□□ 1.66
SLC48A1-208ENST00000551301 NOB1Q9ULX3 412 aaKnown RBP25.43■■□□□ 1.66
SLC48A1-208ENST00000551301 F8W031 263 aaPredicted RBP25.42■■□□□ 1.66
SLC48A1-208ENST00000551301 FRAT2O75474 233 aaPredicted RBP25.42■■□□□ 1.66
SLC48A1-208ENST00000551301 UBTFL1P0CB47 393 aaPredicted RBP25.42■■□□□ 1.66
SLC48A1-208ENST00000551301 REM2Q8IYK8 340 aaPredicted RBP25.42■■□□□ 1.66
SLC48A1-208ENST00000551301 PAPPA2Q9BXP8 1791 aa25.41■■□□□ 1.66
SLC48A1-208ENST00000551301 GYG1P46976 350 aa25.41■■□□□ 1.66
SLC48A1-208ENST00000551301 RBM5P52756 815 aaKnown RBP eCLIP25.41■■□□□ 1.66
SLC48A1-208ENST00000551301 CERS5Q8N5B7 392 aa25.41■■□□□ 1.66
SLC48A1-208ENST00000551301 MTMR14Q8NCE2 650 aa25.41■■□□□ 1.66
SLC48A1-208ENST00000551301 TDRD7Q8NHU6 1098 aaKnown RBP25.41■■□□□ 1.66
SLC48A1-208ENST00000551301 SCAF8Q9UPN6 1271 aaKnown RBP25.41■■□□□ 1.66
SLC48A1-208ENST00000551301 FAM205AQ6ZU69 1335 aa25.4■■□□□ 1.66
SLC48A1-208ENST00000551301 KIF16BQ96L93 1317 aa25.4■■□□□ 1.66
SLC48A1-208ENST00000551301 FAM155AB1AL88 458 aaPredicted RBP25.4■■□□□ 1.66
SLC48A1-208ENST00000551301 PDE8BO95263 885 aa25.4■■□□□ 1.66
SLC48A1-208ENST00000551301 SLC10A3P09131 477 aa25.4■■□□□ 1.66
SLC48A1-208ENST00000551301 KIF23Q02241 960 aaPredicted RBP25.4■■□□□ 1.66
SLC48A1-208ENST00000551301 MFSD14BQ5SR56 506 aa25.4■■□□□ 1.66
SLC48A1-208ENST00000551301 FAM84BQ96KN1 310 aaPredicted RBP25.4■■□□□ 1.66
SLC48A1-208ENST00000551301 JAG2Q9Y219 1238 aa25.4■■□□□ 1.66
SLC48A1-208ENST00000551301 CFAP100Q494V2 611 aa25.39■■□□□ 1.66
SLC48A1-208ENST00000551301 LRRC24Q50LG9 513 aa25.39■■□□□ 1.66
SLC48A1-208ENST00000551301 PRAMEF18Q5VWM3 479 aa25.39■■□□□ 1.66
SLC48A1-208ENST00000551301 ARMC9Q7Z3E5 817 aa25.39■■□□□ 1.66
SLC48A1-208ENST00000551301 ZBED3Q96IU2 234 aaPredicted RBP25.39■■□□□ 1.66
SLC48A1-208ENST00000551301 TSKSQ9UJT2 592 aa25.39■■□□□ 1.66
SLC48A1-208ENST00000551301 IFIT1P09914 478 aaKnown RBP25.38■■□□□ 1.65
SLC48A1-208ENST00000551301 COL1A1P02452 1464 aaPredicted RBP25.37■■□□□ 1.65
SLC48A1-208ENST00000551301 IPO8O15397 1037 aaKnown RBP25.37■■□□□ 1.65
SLC48A1-208ENST00000551301 RARSP54136 660 aaKnown RBP25.37■■□□□ 1.65
SLC48A1-208ENST00000551301 PUM3Q15397 648 aaKnown RBP25.37■■□□□ 1.65
SLC48A1-208ENST00000551301 DEFB129Q9H1M3 183 aa25.37■■□□□ 1.65
SLC48A1-208ENST00000551301 PPP2R3BQ9Y5P8 575 aa25.37■■□□□ 1.65
SLC48A1-208ENST00000551301 SPDYE2BA6NHP3 402 aa25.36■■□□□ 1.65
SLC48A1-208ENST00000551301 UBE2Q2LH0YL09 131 aa25.36■■□□□ 1.65
SLC48A1-208ENST00000551301 SPDYE6P0CI01 402 aa25.36■■□□□ 1.65
SLC48A1-208ENST00000551301 KLHDC4Q8TBB5 520 aa25.36■■□□□ 1.65
SLC48A1-208ENST00000551301 TBC1D22AQ8WUA7 517 aa25.36■■□□□ 1.65
SLC48A1-208ENST00000551301 ARHGAP45Q92619 1136 aa25.36■■□□□ 1.65
SLC48A1-208ENST00000551301 ZIC5Q96T25 663 aa25.36■■□□□ 1.65
SLC48A1-208ENST00000551301 SAGE1Q9NXZ1 904 aa25.36■■□□□ 1.65
SLC48A1-208ENST00000551301 TTF2Q9UNY4 1162 aaKnown RBP25.36■■□□□ 1.65
SLC48A1-208ENST00000551301 EYA2O00167 538 aa25.35■■□□□ 1.65
SLC48A1-208ENST00000551301 FBXO33Q7Z6M2 555 aa25.35■■□□□ 1.65
SLC48A1-208ENST00000551301 RASAL3Q86YV0 1011 aa25.35■■□□□ 1.65
SLC48A1-208ENST00000551301 VEZTQ9HBM0 779 aa25.35■■□□□ 1.65
SLC48A1-208ENST00000551301 SERPINA10Q9UK55 444 aa25.35■■□□□ 1.65
SLC48A1-208ENST00000551301 SUPT20HL1Q3ZLR7 823 aa25.34■■□□□ 1.65
SLC48A1-208ENST00000551301 DIEXFQ68CQ4 756 aaKnown RBP25.34■■□□□ 1.65
SLC48A1-208ENST00000551301 MOB2Q70IA6 237 aa25.34■■□□□ 1.65
SLC48A1-208ENST00000551301 FBXO3Q9UK99 471 aa25.34■■□□□ 1.65
SLC48A1-208ENST00000551301 SLC5A1P13866 664 aa25.33■■□□□ 1.65
SLC48A1-208ENST00000551301 CHAF1AQ13111 956 aaPredicted RBP25.33■■□□□ 1.65
SLC48A1-208ENST00000551301 TNFAIP1Q13829 316 aa25.33■■□□□ 1.65
SLC48A1-208ENST00000551301 VGLL2Q8N8G2 317 aa25.33■■□□□ 1.65
SLC48A1-208ENST00000551301 PRMT6Q96LA8 375 aaPredicted RBP25.33■■□□□ 1.65
SLC48A1-208ENST00000551301 CLRN2A0PK11 232 aa25.32■■□□□ 1.64
SLC48A1-208ENST00000551301 PPP1R12BO60237 982 aaPredicted RBP25.32■■□□□ 1.64
SLC48A1-208ENST00000551301 PRKG1Q13976 671 aa25.32■■□□□ 1.64
SLC48A1-208ENST00000551301 IQSEC3Q9UPP2 1182 aaPredicted RBP25.32■■□□□ 1.64
SLC48A1-208ENST00000551301 GNAI3P08754 354 aa25.31■■□□□ 1.64
SLC48A1-208ENST00000551301 PTPN12Q05209 780 aaKnown RBP25.31■■□□□ 1.64
SLC48A1-208ENST00000551301 LPIN2Q92539 896 aa25.31■■□□□ 1.64
SLC48A1-208ENST00000551301 CSRNP1Q96S65 589 aa25.31■■□□□ 1.64
SLC48A1-208ENST00000551301 CEP126Q9P2H0 1117 aa25.31■■□□□ 1.64
SLC48A1-208ENST00000551301 ANGEL1Q9UNK9 670 aaKnown RBP25.31■■□□□ 1.64
SLC48A1-208ENST00000551301 AKAP11Q9UKA4 1901 aa25.31■■□□□ 1.64
SLC48A1-208ENST00000551301 ECM29Q5VYK3 1845 aa25.3■■□□□ 1.64
SLC48A1-208ENST00000551301 TRPA1O75762 1119 aa25.3■■□□□ 1.64
SLC48A1-208ENST00000551301 CIAO1O76071 339 aa25.3■■□□□ 1.64
SLC48A1-208ENST00000551301 RFX5P48382 616 aaPredicted RBP25.3■■□□□ 1.64
SLC48A1-208ENST00000551301 RNF186Q9NXI6 227 aa25.3■■□□□ 1.64
SLC48A1-208ENST00000551301 LRRFIP2Q9Y608 721 aaKnown RBP25.3■■□□□ 1.64
SLC48A1-208ENST00000551301 BCAMP50895 628 aa25.29■■□□□ 1.64
SLC48A1-208ENST00000551301 INTS3Q68E01 1043 aaKnown RBP25.29■■□□□ 1.64
SLC48A1-208ENST00000551301 SIL1Q9H173 461 aa25.29■■□□□ 1.64
SLC48A1-208ENST00000551301 HDLBPQ00341 1268 aaKnown RBP25.28■■□□□ 1.64
SLC48A1-208ENST00000551301 HNRNPUQ00839 825 aaKnown RBP eCLIP25.28■■□□□ 1.64
SLC48A1-208ENST00000551301 MIER1Q8N108 512 aa25.28■■□□□ 1.64
SLC48A1-208ENST00000551301 FRAT1Q92837 279 aaPredicted RBP25.28■■□□□ 1.64
SLC48A1-208ENST00000551301 ABHD8Q96I13 439 aa25.28■■□□□ 1.64
SLC48A1-208ENST00000551301 GNL3LQ9NVN8 582 aaKnown RBP25.28■■□□□ 1.64
SLC48A1-208ENST00000551301 PCDHAC2Q9Y5I4 1007 aa25.28■■□□□ 1.64
SLC48A1-208ENST00000551301 MAST3O60307 1309 aa25.28■■□□□ 1.64
SLC48A1-208ENST00000551301 FGFR2P21802 821 aa25.27■■□□□ 1.64
SLC48A1-208ENST00000551301 CRKP46108 304 aa25.27■■□□□ 1.64
SLC48A1-208ENST00000551301 TNNI2P48788 182 aa25.27■■□□□ 1.64
SLC48A1-208ENST00000551301 DZIP1LQ8IYY4 767 aaKnown RBP25.27■■□□□ 1.64
SLC48A1-208ENST00000551301 TEKT1Q969V4 418 aa25.27■■□□□ 1.64
SLC48A1-208ENST00000551301 SLC10A4Q96EP9 437 aa25.27■■□□□ 1.64
SLC48A1-208ENST00000551301 SUGT1Q9Y2Z0 365 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms