RNA–Protein interactions for RNA: ENST00000551219.5

PTPRR-211, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best)

Gene PTPRR, Length 2,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-211ENST00000551219 FBXL16Q8N461 479 aa7.79□□□□□ -1.16
PTPRR-211ENST00000551219 FSIP1Q8NA03 581 aa7.79□□□□□ -1.16
PTPRR-211ENST00000551219 KBTBD3Q8NAB2 608 aa7.79□□□□□ -1.16
PTPRR-211ENST00000551219 MRPS27Q92552 414 aaKnown RBP7.79□□□□□ -1.16
PTPRR-211ENST00000551219 ZNF274Q96GC6 653 aaPredicted RBP7.79□□□□□ -1.16
PTPRR-211ENST00000551219 REPIN1Q9BWE0 567 aaKnown RBP7.79□□□□□ -1.16
PTPRR-211ENST00000551219 GOLPH3LQ9H4A5 285 aa7.79□□□□□ -1.16
PTPRR-211ENST00000551219 KIF13AQ9H1H9 1805 aa7.79□□□□□ -1.16
PTPRR-211ENST00000551219 PSDA5PKW4 1024 aaPredicted RBP7.79□□□□□ -1.16
PTPRR-211ENST00000551219 PROCA1Q8NCQ7 364 aaPredicted RBP7.79□□□□□ -1.16
PTPRR-211ENST00000551219 DDX11Q96FC9 970 aa7.79□□□□□ -1.16
PTPRR-211ENST00000551219 FAM53CQ9NYF3 392 aa7.79□□□□□ -1.16
PTPRR-211ENST00000551219 RTEL1Q9NZ71 1219 aa7.79□□□□□ -1.16
PTPRR-211ENST00000551219 EXOSC10Q01780 885 aaKnown RBP7.78□□□□□ -1.16
PTPRR-211ENST00000551219 ZRSR1Q15695 479 aaKnown RBP7.78□□□□□ -1.16
PTPRR-211ENST00000551219 ZNF771Q7L3S4 317 aaPredicted RBP7.78□□□□□ -1.16
PTPRR-211ENST00000551219 ARHGEF25Q86VW2 580 aa7.78□□□□□ -1.16
PTPRR-211ENST00000551219 USP28Q96RU2 1077 aa7.78□□□□□ -1.16
PTPRR-211ENST00000551219 GPR108Q9NPR9 543 aa7.78□□□□□ -1.16
PTPRR-211ENST00000551219 YEATS4O95619 227 aa7.78□□□□□ -1.16
PTPRR-211ENST00000551219 ME1P48163 572 aa7.78□□□□□ -1.16
PTPRR-211ENST00000551219 PTPN12Q05209 780 aaKnown RBP7.78□□□□□ -1.16
PTPRR-211ENST00000551219 ADALQ6DHV7 355 aa7.78□□□□□ -1.16
PTPRR-211ENST00000551219 FMR1NBQ8N0W7 255 aaPredicted RBP7.78□□□□□ -1.16
PTPRR-211ENST00000551219 KCNG4Q8TDN1 519 aa7.78□□□□□ -1.16
PTPRR-211ENST00000551219 LRRC59Q96AG4 307 aaKnown RBP7.78□□□□□ -1.16
PTPRR-211ENST00000551219 MRRFQ96E11 262 aaKnown RBP7.78□□□□□ -1.16
PTPRR-211ENST00000551219 CTDNEP1O95476 244 aa7.77□□□□□ -1.16
PTPRR-211ENST00000551219 PSME1Q06323 249 aa7.77□□□□□ -1.16
PTPRR-211ENST00000551219 TFCP2Q12800 502 aa7.77□□□□□ -1.16
PTPRR-211ENST00000551219 AIMP1Q12904 312 aaKnown RBP7.77□□□□□ -1.16
PTPRR-211ENST00000551219 AOPEPQ8N6M6 819 aa7.77□□□□□ -1.16
PTPRR-211ENST00000551219 ANKRD24Q8TF21 1146 aa7.77□□□□□ -1.16
PTPRR-211ENST00000551219 MYD88Q99836 296 aa7.77□□□□□ -1.16
PTPRR-211ENST00000551219 L2HGDHQ9H9P8 463 aa7.77□□□□□ -1.16
PTPRR-211ENST00000551219 ZNF215Q9UL58 517 aaPredicted RBP7.77□□□□□ -1.16
PTPRR-211ENST00000551219 TMEM94Q12767 1356 aa7.77□□□□□ -1.17
PTPRR-211ENST00000551219 RGPD2P0DJD1 1756 aa7.77□□□□□ -1.17
PTPRR-211ENST00000551219 USP27XA6NNY8 438 aa7.77□□□□□ -1.17
PTPRR-211ENST00000551219 EVCP57679 992 aa7.77□□□□□ -1.17
PTPRR-211ENST00000551219 ZNF790Q6PG37 636 aa7.77□□□□□ -1.17
PTPRR-211ENST00000551219 FILIP1Q7Z7B0 1213 aa7.77□□□□□ -1.17
PTPRR-211ENST00000551219 XAGE3Q8WTP9 111 aa7.77□□□□□ -1.17
PTPRR-211ENST00000551219 DNAJC2Q99543 621 aaKnown RBP7.77□□□□□ -1.17
PTPRR-211ENST00000551219 USP16Q9Y5T5 823 aa7.77□□□□□ -1.17
PTPRR-211ENST00000551219 SPEF2Q9C093 1822 aa7.77□□□□□ -1.17
PTPRR-211ENST00000551219 CARMIL3Q8ND23 1372 aa7.77□□□□□ -1.17
PTPRR-211ENST00000551219 CCDC66A2RUB6 948 aa7.77□□□□□ -1.17
PTPRR-211ENST00000551219 PRAMEF22A3QJZ6 481 aa7.77□□□□□ -1.17
PTPRR-211ENST00000551219 MYO1BO43795 1136 aa7.77□□□□□ -1.17
PTPRR-211ENST00000551219 CEBPZQ03701 1054 aaKnown RBP7.77□□□□□ -1.17
PTPRR-211ENST00000551219 LRRFIP1Q32MZ4 808 aaKnown RBP7.77□□□□□ -1.17
PTPRR-211ENST00000551219 KMT5BQ4FZB7 885 aa7.77□□□□□ -1.17
PTPRR-211ENST00000551219 EPHA10Q5JZY3 1008 aa7.77□□□□□ -1.17
PTPRR-211ENST00000551219 ZMYM1Q5SVZ6 1142 aa7.77□□□□□ -1.17
PTPRR-211ENST00000551219 STOX1Q6ZVD7 989 aa7.77□□□□□ -1.17
PTPRR-211ENST00000551219 BRAPQ7Z569 592 aa7.77□□□□□ -1.17
PTPRR-211ENST00000551219 EDC3Q96F86 508 aaKnown RBP7.77□□□□□ -1.17
PTPRR-211ENST00000551219 POLR3EQ9NVU0 708 aa7.77□□□□□ -1.17
PTPRR-211ENST00000551219 C5P01031 1676 aa7.76□□□□□ -1.17
PTPRR-211ENST00000551219 DHX16O60231 1041 aaKnown RBP7.76□□□□□ -1.17
PTPRR-211ENST00000551219 SLFN14P0C7P3 912 aa7.76□□□□□ -1.17
PTPRR-211ENST00000551219 APOBRQ0VD83 1088 aa7.76□□□□□ -1.17
PTPRR-211ENST00000551219 CCDC129Q6ZRS4 1044 aa7.76□□□□□ -1.17
PTPRR-211ENST00000551219 ZNF662Q6ZS27 426 aa7.76□□□□□ -1.17
PTPRR-211ENST00000551219 ANKRD13DQ6ZTN6 518 aa7.76□□□□□ -1.17
PTPRR-211ENST00000551219 KLHDC4Q8TBB5 520 aa7.76□□□□□ -1.17
PTPRR-211ENST00000551219 DBNDD2Q9BQY9 259 aa7.76□□□□□ -1.17
PTPRR-211ENST00000551219 SDF4Q9BRK5 362 aa7.76□□□□□ -1.17
PTPRR-211ENST00000551219 KIAA1468Q9P260 1216 aa7.76□□□□□ -1.17
PTPRR-211ENST00000551219 GCP02774 474 aa7.76□□□□□ -1.17
PTPRR-211ENST00000551219 SFPQP23246 707 aaKnown RBP eCLIP7.76□□□□□ -1.17
PTPRR-211ENST00000551219 PDIA3P30101 505 aaKnown RBP7.76□□□□□ -1.17
PTPRR-211ENST00000551219 CEBPAP49715 358 aaPredicted RBP7.76□□□□□ -1.17
PTPRR-211ENST00000551219 NLRP12P59046 1061 aa7.76□□□□□ -1.17
PTPRR-211ENST00000551219 ARID5BQ14865 1188 aa7.76□□□□□ -1.17
PTPRR-211ENST00000551219 COPS6Q7L5N1 327 aa7.76□□□□□ -1.17
PTPRR-211ENST00000551219 NBPF11Q86T75 865 aa7.76□□□□□ -1.17
PTPRR-211ENST00000551219 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.76□□□□□ -1.17
PTPRR-211ENST00000551219 PCMTD1Q96MG8 357 aaPredicted RBP7.76□□□□□ -1.17
PTPRR-211ENST00000551219 SLC52A2Q9HAB3 445 aa7.76□□□□□ -1.17
PTPRR-211ENST00000551219 PAG1Q9NWQ8 432 aa7.76□□□□□ -1.17
PTPRR-211ENST00000551219 PCDHA7Q9UN72 937 aa7.76□□□□□ -1.17
PTPRR-211ENST00000551219 MST1RQ04912 1400 aa7.75□□□□□ -1.17
PTPRR-211ENST00000551219 PHLPP2Q6ZVD8 1323 aa7.75□□□□□ -1.17
PTPRR-211ENST00000551219 E7EWF7 191 aa7.75□□□□□ -1.17
PTPRR-211ENST00000551219 IKBKBO14920 756 aa7.75□□□□□ -1.17
PTPRR-211ENST00000551219 CBFA2T2O43439 604 aa7.75□□□□□ -1.17
PTPRR-211ENST00000551219 BMS1Q14692 1282 aaKnown RBP7.75□□□□□ -1.17
PTPRR-211ENST00000551219 SF3A1Q15459 793 aaKnown RBP7.75□□□□□ -1.17
PTPRR-211ENST00000551219 TERF2Q15554 542 aa7.75□□□□□ -1.17
PTPRR-211ENST00000551219 FBXO38Q6PIJ6 1188 aa7.75□□□□□ -1.17
PTPRR-211ENST00000551219 ILDR1Q86SU0 546 aaPredicted RBP7.75□□□□□ -1.17
PTPRR-211ENST00000551219 LINC00301Q8NCQ3 95 aa7.75□□□□□ -1.17
PTPRR-211ENST00000551219 PPP1R13BQ96KQ4 1090 aa7.75□□□□□ -1.17
PTPRR-211ENST00000551219 SRRTQ9BXP5 876 aaKnown RBP7.75□□□□□ -1.17
PTPRR-211ENST00000551219 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.75□□□□□ -1.17
PTPRR-211ENST00000551219 WDR19Q8NEZ3 1342 aa7.75□□□□□ -1.17
PTPRR-211ENST00000551219 SNRPA1P09661 255 aaKnown RBP7.75□□□□□ -1.17
PTPRR-211ENST00000551219 H2AFXP16104 143 aaPredicted RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms