RNA–Protein interactions for RNA: ENST00000550828.1

ERBB3-215, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-215ENST00000550828 PI4K2BQ8TCG2 481 aa16.55■□□□□ 0.24
ERBB3-215ENST00000550828 STAP2Q9UGK3 403 aa16.55■□□□□ 0.24
ERBB3-215ENST00000550828 MAST2Q6P0Q8 1798 aa16.54■□□□□ 0.24
ERBB3-215ENST00000550828 MX1P20591 662 aa16.54■□□□□ 0.24
ERBB3-215ENST00000550828 CAVIN4Q5BKX8 364 aa16.54■□□□□ 0.24
ERBB3-215ENST00000550828 C9orf131Q5VYM1 1079 aa16.54■□□□□ 0.24
ERBB3-215ENST00000550828 RNF181Q9P0P0 153 aa16.54■□□□□ 0.24
ERBB3-215ENST00000550828 JAG2Q9Y219 1238 aa16.54■□□□□ 0.24
ERBB3-215ENST00000550828 NDUFB9Q9Y6M9 179 aa16.54■□□□□ 0.24
ERBB3-215ENST00000550828 ZNF541Q9H0D2 1346 aa16.53■□□□□ 0.24
ERBB3-215ENST00000550828 ZBTB22O15209 634 aa16.53■□□□□ 0.24
ERBB3-215ENST00000550828 FSTL1Q12841 308 aa16.53■□□□□ 0.24
ERBB3-215ENST00000550828 TTC39AQ5SRH9 613 aa16.53■□□□□ 0.24
ERBB3-215ENST00000550828 GORABQ5T7V8 394 aa16.53■□□□□ 0.24
ERBB3-215ENST00000550828 NIM1KQ8IY84 436 aa16.53■□□□□ 0.24
ERBB3-215ENST00000550828 JMYQ8N9B5 988 aa16.53■□□□□ 0.24
ERBB3-215ENST00000550828 KLRG1Q96E93 195 aa16.53■□□□□ 0.24
ERBB3-215ENST00000550828 ZNF512BQ96KM6 892 aaPredicted RBP16.53■□□□□ 0.24
ERBB3-215ENST00000550828 NMRK2Q9NPI5 230 aa16.53■□□□□ 0.24
ERBB3-215ENST00000550828 SNRKQ9NRH2 765 aa16.53■□□□□ 0.24
ERBB3-215ENST00000550828 ECHDC1Q9NTX5 307 aa16.53■□□□□ 0.24
ERBB3-215ENST00000550828 HMG20BQ9P0W2 317 aa16.53■□□□□ 0.24
ERBB3-215ENST00000550828 MYH2Q9UKX2 1941 aa16.53■□□□□ 0.24
ERBB3-215ENST00000550828 FAM205AQ6ZU69 1335 aa16.52■□□□□ 0.24
ERBB3-215ENST00000550828 FZD9O00144 591 aa16.52■□□□□ 0.24
ERBB3-215ENST00000550828 ATP5JP18859 108 aa16.52■□□□□ 0.24
ERBB3-215ENST00000550828 GRIK5Q16478 980 aa16.52■□□□□ 0.24
ERBB3-215ENST00000550828 VPS37DQ86XT2 251 aa16.52■□□□□ 0.24
ERBB3-215ENST00000550828 EDC3Q96F86 508 aaKnown RBP16.52■□□□□ 0.24
ERBB3-215ENST00000550828 MXD3Q9BW11 206 aa16.52■□□□□ 0.24
ERBB3-215ENST00000550828 ZBTB47Q9UFB7 747 aaPredicted RBP16.52■□□□□ 0.24
ERBB3-215ENST00000550828 ZNRF3Q9ULT6 936 aa16.52■□□□□ 0.24
ERBB3-215ENST00000550828 TTC41PQ6P2S7 1318 aa16.51■□□□□ 0.23
ERBB3-215ENST00000550828 UQCRFS1P1P0C7P4 283 aa16.51■□□□□ 0.23
ERBB3-215ENST00000550828 ZAP70P43403 619 aa16.51■□□□□ 0.23
ERBB3-215ENST00000550828 CXCL9Q07325 125 aa16.51■□□□□ 0.23
ERBB3-215ENST00000550828 CCDC158Q5M9N0 1113 aa16.51■□□□□ 0.23
ERBB3-215ENST00000550828 PODNQ7Z5L7 613 aa16.51■□□□□ 0.23
ERBB3-215ENST00000550828 CERS5Q8N5B7 392 aa16.51■□□□□ 0.23
ERBB3-215ENST00000550828 BOLA2Q9H3K6 86 aa16.51■□□□□ 0.23
ERBB3-215ENST00000550828 OSBPL3Q9H4L5 887 aa16.51■□□□□ 0.23
ERBB3-215ENST00000550828 AOX1Q06278 1338 aa16.5■□□□□ 0.23
ERBB3-215ENST00000550828 RAD17O75943 681 aa16.5■□□□□ 0.23
ERBB3-215ENST00000550828 GTF2IP78347 998 aa16.5■□□□□ 0.23
ERBB3-215ENST00000550828 CHAF1AQ13111 956 aaPredicted RBP16.5■□□□□ 0.23
ERBB3-215ENST00000550828 DACT2Q5SW24 774 aa16.5■□□□□ 0.23
ERBB3-215ENST00000550828 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.5■□□□□ 0.23
ERBB3-215ENST00000550828 ANTXR1Q9H6X2 564 aa16.5■□□□□ 0.23
ERBB3-215ENST00000550828 PDS5AQ29RF7 1337 aaKnown RBP16.49■□□□□ 0.23
ERBB3-215ENST00000550828 PSMD14O00487 310 aa16.49■□□□□ 0.23
ERBB3-215ENST00000550828 SEMA3EO15041 775 aa16.49■□□□□ 0.23
ERBB3-215ENST00000550828 CYP2E1P05181 493 aaPredicted RBP16.49■□□□□ 0.23
ERBB3-215ENST00000550828 GSPT1P15170 499 aaKnown RBP16.49■□□□□ 0.23
ERBB3-215ENST00000550828 SPATA5Q8NB90 893 aa16.49■□□□□ 0.23
ERBB3-215ENST00000550828 HAUS7Q99871 368 aa16.49■□□□□ 0.23
ERBB3-215ENST00000550828 PIH1D3Q9NQM4 214 aaKnown RBP16.49■□□□□ 0.23
ERBB3-215ENST00000550828 CDK5RAP2Q96SN8 1893 aa16.48■□□□□ 0.23
ERBB3-215ENST00000550828 G3V3G9 751 aa16.48■□□□□ 0.23
ERBB3-215ENST00000550828 MAP4K4O95819 1239 aaPredicted RBP16.48■□□□□ 0.23
ERBB3-215ENST00000550828 RGS3P49796 1198 aa16.48■□□□□ 0.23
ERBB3-215ENST00000550828 DCAF8Q5TAQ9 597 aa16.48■□□□□ 0.23
ERBB3-215ENST00000550828 TBC1D9Q6ZT07 1266 aa16.48■□□□□ 0.23
ERBB3-215ENST00000550828 JDP2Q8WYK2 163 aa16.48■□□□□ 0.23
ERBB3-215ENST00000550828 GPATCH3Q96I76 525 aa16.48■□□□□ 0.23
ERBB3-215ENST00000550828 GNL3LQ9NVN8 582 aaKnown RBP16.48■□□□□ 0.23
ERBB3-215ENST00000550828 DENND2AQ9ULE3 1009 aa16.48■□□□□ 0.23
ERBB3-215ENST00000550828 USP17L3A6NCW0 530 aa16.47■□□□□ 0.23
ERBB3-215ENST00000550828 USP17L4A6NCW7 530 aa16.47■□□□□ 0.23
ERBB3-215ENST00000550828 GLRX3O76003 335 aaKnown RBP16.47■□□□□ 0.23
ERBB3-215ENST00000550828 VIL1P09327 827 aaKnown RBP16.47■□□□□ 0.23
ERBB3-215ENST00000550828 COL13A1Q5TAT6 717 aaPredicted RBP16.47■□□□□ 0.23
ERBB3-215ENST00000550828 STRIP1Q5VSL9 837 aa16.47■□□□□ 0.23
ERBB3-215ENST00000550828 TTLL5Q6EMB2 1281 aa16.47■□□□□ 0.23
ERBB3-215ENST00000550828 USP17L1Q7RTZ2 530 aa16.47■□□□□ 0.23
ERBB3-215ENST00000550828 GMLQ99445 158 aa16.47■□□□□ 0.23
ERBB3-215ENST00000550828 DNAJC2Q99543 621 aaKnown RBP16.47■□□□□ 0.23
ERBB3-215ENST00000550828 ECM29Q5VYK3 1845 aa16.47■□□□□ 0.23
ERBB3-215ENST00000550828 FRAT2O75474 233 aaPredicted RBP16.46■□□□□ 0.23
ERBB3-215ENST00000550828 TTC22Q5TAA0 569 aa16.46■□□□□ 0.23
ERBB3-215ENST00000550828 CIAPIN1Q6FI81 312 aa16.46■□□□□ 0.23
ERBB3-215ENST00000550828 TNS4Q8IZW8 715 aa16.46■□□□□ 0.23
ERBB3-215ENST00000550828 ZNF384Q8TF68 577 aa16.46■□□□□ 0.23
ERBB3-215ENST00000550828 FBXW7Q969H0 707 aa16.46■□□□□ 0.23
ERBB3-215ENST00000550828 ZBTB12Q9Y330 459 aaPredicted RBP16.46■□□□□ 0.23
ERBB3-215ENST00000550828 SALL1Q9NSC2 1324 aa16.45■□□□□ 0.22
ERBB3-215ENST00000550828 SHTN1A0MZ66 631 aa16.45■□□□□ 0.22
ERBB3-215ENST00000550828 GOLIM4O00461 696 aa16.45■□□□□ 0.22
ERBB3-215ENST00000550828 CHGBP05060 677 aa16.45■□□□□ 0.22
ERBB3-215ENST00000550828 PRDX5P30044 214 aa16.45■□□□□ 0.22
ERBB3-215ENST00000550828 MFSD14BQ5SR56 506 aa16.45■□□□□ 0.22
ERBB3-215ENST00000550828 RSBN1LQ6PCB5 846 aaPredicted RBP16.45■□□□□ 0.22
ERBB3-215ENST00000550828 ERC2O15083 957 aa16.44■□□□□ 0.22
ERBB3-215ENST00000550828 EIF6P56537 245 aaKnown RBP16.44■□□□□ 0.22
ERBB3-215ENST00000550828 WDR66Q8TBY9 1149 aa16.44■□□□□ 0.22
ERBB3-215ENST00000550828 PAG1Q9NWQ8 432 aa16.44■□□□□ 0.22
ERBB3-215ENST00000550828 SCN4AP35499 1836 aa16.44■□□□□ 0.22
ERBB3-215ENST00000550828 ZC3H4Q9UPT8 1303 aaKnown RBP16.44■□□□□ 0.22
ERBB3-215ENST00000550828 DDNO94850 711 aaPredicted RBP16.43■□□□□ 0.22
ERBB3-215ENST00000550828 FKBP1AP62942 108 aaKnown RBP16.43■□□□□ 0.22
ERBB3-215ENST00000550828 SLFNL1Q499Z3 407 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms