RNA–Protein interactions for RNA: ENST00000550442.5

LETMD1-223, Transcript of LETM1 domain containing 1, human

TSL 4

Gene LETMD1, Length 469 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LETMD1-223	ENST00000550442	HS1BP3	Q53T59	392 aa		14.03	□□□□□ -0.16
LETMD1-223	ENST00000550442	PRPF40B	Q6NWY9	871 aa	Known RBP	14.03	□□□□□ -0.16
LETMD1-223	ENST00000550442	ATG9A	Q7Z3C6	839 aa		14.03	□□□□□ -0.16
LETMD1-223	ENST00000550442	C2CD5	Q86YS7	1000 aa		14.03	□□□□□ -0.16
LETMD1-223	ENST00000550442	ZGPAT	Q8N5A5	531 aa	Known RBP	14.03	□□□□□ -0.16
LETMD1-223	ENST00000550442	FAM184A	Q8NB25	1140 aa		14.03	□□□□□ -0.16
LETMD1-223	ENST00000550442	LLPH	Q9BRT6	129 aa	Known RBP	14.03	□□□□□ -0.16
LETMD1-223	ENST00000550442	UPF3B	Q9BZI7	483 aa	Known RBP	14.03	□□□□□ -0.16
LETMD1-223	ENST00000550442	FOXD4L1	Q9NU39	408 aa		14.03	□□□□□ -0.16
LETMD1-223	ENST00000550442	ABT1	Q9ULW3	272 aa	Known RBP	14.03	□□□□□ -0.16
LETMD1-223	ENST00000550442	FER1L6	Q2WGJ9	1857 aa		14.02	□□□□□ -0.16
LETMD1-223	ENST00000550442	STX6	O43752	255 aa		14.02	□□□□□ -0.17
LETMD1-223	ENST00000550442	MAP4K4	O95819	1239 aa	Predicted RBP	14.02	□□□□□ -0.17
LETMD1-223	ENST00000550442	ITGBL1	O95965	494 aa	Predicted RBP	14.02	□□□□□ -0.17
LETMD1-223	ENST00000550442	ZSCAN22	P10073	491 aa	Predicted RBP	14.02	□□□□□ -0.17
LETMD1-223	ENST00000550442	RPS6KB1	P23443	525 aa		14.02	□□□□□ -0.17
LETMD1-223	ENST00000550442	IFIT5	Q13325	482 aa	Known RBP	14.02	□□□□□ -0.17
LETMD1-223	ENST00000550442	EAPP	Q56P03	285 aa	Predicted RBP	14.02	□□□□□ -0.17
LETMD1-223	ENST00000550442	TTLL7	Q6ZT98	887 aa		14.02	□□□□□ -0.17
LETMD1-223	ENST00000550442	RASEF	Q8IZ41	740 aa		14.02	□□□□□ -0.17
LETMD1-223	ENST00000550442	PAG1	Q9NWQ8	432 aa		14.02	□□□□□ -0.17
LETMD1-223	ENST00000550442	CLEC11A	Q9Y240	323 aa		14.02	□□□□□ -0.17
LETMD1-223	ENST00000550442	ZDHHC9	Q9Y397	364 aa		14.02	□□□□□ -0.17
LETMD1-223	ENST00000550442	IGSF3	O75054	1194 aa		14.01	□□□□□ -0.17
LETMD1-223	ENST00000550442	PTH1R	Q03431	593 aa		14.01	□□□□□ -0.17
LETMD1-223	ENST00000550442	CCDC173	Q0VFZ6	552 aa		14.01	□□□□□ -0.17
LETMD1-223	ENST00000550442	PARP10	Q53GL7	1025 aa		14.01	□□□□□ -0.17
LETMD1-223	ENST00000550442	ATL3	Q6DD88	541 aa		14.01	□□□□□ -0.17
LETMD1-223	ENST00000550442	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	14.01	□□□□□ -0.17
LETMD1-223	ENST00000550442	TAF1D	Q9H5J8	278 aa	Predicted RBP	14.01	□□□□□ -0.17
LETMD1-223	ENST00000550442	PRPF40A	O75400	957 aa	Known RBP	14	□□□□□ -0.17
LETMD1-223	ENST00000550442	CYP19A1	P11511	503 aa	Predicted RBP	14	□□□□□ -0.17
LETMD1-223	ENST00000550442	TAF7L	Q5H9L4	462 aa		14	□□□□□ -0.17
LETMD1-223	ENST00000550442	TMED8	Q6PL24	325 aa	Predicted RBP	14	□□□□□ -0.17
LETMD1-223	ENST00000550442	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	14	□□□□□ -0.17
LETMD1-223	ENST00000550442	NEK1	Q96PY6	1258 aa		14	□□□□□ -0.17
LETMD1-223	ENST00000550442	MCOLN1	Q9GZU1	580 aa		14	□□□□□ -0.17
LETMD1-223	ENST00000550442	ZNF219	Q9P2Y4	722 aa	Predicted RBP	14	□□□□□ -0.17
LETMD1-223	ENST00000550442	NRXN2	Q9P2S2	1712 aa		14	□□□□□ -0.17
LETMD1-223	ENST00000550442	TNRC18	O15417	2968 aa	Predicted RBP	14	□□□□□ -0.17
LETMD1-223	ENST00000550442	WDR19	Q8NEZ3	1342 aa		13.99	□□□□□ -0.17
LETMD1-223	ENST00000550442	ANKRD18B	A2A2Z9	1011 aa		13.99	□□□□□ -0.17
LETMD1-223	ENST00000550442	RNF113A	O15541	343 aa	Known RBP	13.99	□□□□□ -0.17
LETMD1-223	ENST00000550442	C21orf2	O43822	256 aa		13.99	□□□□□ -0.17
LETMD1-223	ENST00000550442	IFIT1	P09914	478 aa	Known RBP	13.99	□□□□□ -0.17
LETMD1-223	ENST00000550442	UQCRFS1P1	P0C7P4	283 aa		13.99	□□□□□ -0.17
LETMD1-223	ENST00000550442	ECE1	P42892	770 aa		13.99	□□□□□ -0.17
LETMD1-223	ENST00000550442	UBE2H	P62256	183 aa		13.99	□□□□□ -0.17
LETMD1-223	ENST00000550442	ZMYM1	Q5SVZ6	1142 aa		13.99	□□□□□ -0.17
LETMD1-223	ENST00000550442	DBNDD2	Q9BQY9	259 aa		13.99	□□□□□ -0.17
LETMD1-223	ENST00000550442	GZF1	Q9H116	711 aa	Predicted RBP	13.99	□□□□□ -0.17
LETMD1-223	ENST00000550442	IL25	Q9H293	177 aa		13.99	□□□□□ -0.17
LETMD1-223	ENST00000550442	TAOK3	Q9H2K8	898 aa		13.99	□□□□□ -0.17
LETMD1-223	ENST00000550442	CHMP3	Q9Y3E7	222 aa		13.99	□□□□□ -0.17
LETMD1-223	ENST00000550442	ZNF609	O15014	1411 aa		13.98	□□□□□ -0.17
LETMD1-223	ENST00000550442	THSD7B	Q9C0I4	1608 aa		13.98	□□□□□ -0.17
LETMD1-223	ENST00000550442	ELP1	O95163	1332 aa		13.98	□□□□□ -0.17
LETMD1-223	ENST00000550442	MROH5	Q6ZUA9	1318 aa		13.98	□□□□□ -0.17
LETMD1-223	ENST00000550442	LTBP3	Q9NS15	1303 aa		13.98	□□□□□ -0.17
LETMD1-223	ENST00000550442		A0A0D9SFI3	127 aa		13.98	□□□□□ -0.17
LETMD1-223	ENST00000550442		A0A1B0GUL7	405 aa		13.98	□□□□□ -0.17
LETMD1-223	ENST00000550442	PDE8A	O60658	829 aa		13.98	□□□□□ -0.17
LETMD1-223	ENST00000550442	SERPINB2	P05120	415 aa		13.98	□□□□□ -0.17
LETMD1-223	ENST00000550442	SYT1	P21579	422 aa		13.98	□□□□□ -0.17
LETMD1-223	ENST00000550442	HMGN5	P82970	282 aa	Known RBP	13.98	□□□□□ -0.17
LETMD1-223	ENST00000550442	NFIX	Q14938	502 aa		13.98	□□□□□ -0.17
LETMD1-223	ENST00000550442	UVSSA	Q2YD98	709 aa		13.98	□□□□□ -0.17
LETMD1-223	ENST00000550442	ZSCAN23	Q3MJ62	389 aa		13.98	□□□□□ -0.17
LETMD1-223	ENST00000550442	GORAB	Q5T7V8	394 aa		13.98	□□□□□ -0.17
LETMD1-223	ENST00000550442	ZNF622	Q969S3	477 aa	Known RBP eCLIP	13.98	□□□□□ -0.17
LETMD1-223	ENST00000550442	L3MBTL3	Q96JM7	780 aa	Predicted RBP	13.98	□□□□□ -0.17
LETMD1-223	ENST00000550442	FAM227B	Q96M60	508 aa		13.98	□□□□□ -0.17
LETMD1-223	ENST00000550442	NEUROD6	Q96NK8	337 aa		13.98	□□□□□ -0.17
LETMD1-223	ENST00000550442	SCAND2P	Q9GZW5	306 aa	Predicted RBP	13.98	□□□□□ -0.17
LETMD1-223	ENST00000550442	ZBTB3	Q9H5J0	574 aa		13.98	□□□□□ -0.17
LETMD1-223	ENST00000550442	RTL9	Q8NET4	1388 aa		13.97	□□□□□ -0.17
LETMD1-223	ENST00000550442	CASP8AP2	Q9UKL3	1982 aa		13.97	□□□□□ -0.17
LETMD1-223	ENST00000550442	F13A1	P00488	732 aa		13.97	□□□□□ -0.17
LETMD1-223	ENST00000550442	LRSAM1	Q6UWE0	723 aa		13.97	□□□□□ -0.17
LETMD1-223	ENST00000550442	DHX32	Q7L7V1	743 aa	Known RBP	13.97	□□□□□ -0.17
LETMD1-223	ENST00000550442	NLRP10	Q86W26	655 aa		13.97	□□□□□ -0.17
LETMD1-223	ENST00000550442	DNAJC10	Q8IXB1	793 aa		13.97	□□□□□ -0.17
LETMD1-223	ENST00000550442	TRIM44	Q96DX7	344 aa	Predicted RBP	13.97	□□□□□ -0.17
LETMD1-223	ENST00000550442	PPP1R9B	Q96SB3	815 aa		13.97	□□□□□ -0.17
LETMD1-223	ENST00000550442	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	13.97	□□□□□ -0.17
LETMD1-223	ENST00000550442	TLR7	Q9NYK1	1049 aa	Known RBP	13.97	□□□□□ -0.17
LETMD1-223	ENST00000550442	ZBTB22	O15209	634 aa		13.96	□□□□□ -0.17
LETMD1-223	ENST00000550442	DHX16	O60231	1041 aa	Known RBP	13.96	□□□□□ -0.17
LETMD1-223	ENST00000550442	NASP	P49321	788 aa	Predicted RBP	13.96	□□□□□ -0.17
LETMD1-223	ENST00000550442	GRM1	Q13255	1194 aa		13.96	□□□□□ -0.17
LETMD1-223	ENST00000550442	TTC39A	Q5SRH9	613 aa		13.96	□□□□□ -0.17
LETMD1-223	ENST00000550442	PRPF38B	Q5VTL8	546 aa	Known RBP	13.96	□□□□□ -0.17
LETMD1-223	ENST00000550442	CLEC4G	Q6UXB4	293 aa		13.96	□□□□□ -0.17
LETMD1-223	ENST00000550442	KLHDC4	Q8TBB5	520 aa		13.96	□□□□□ -0.17
LETMD1-223	ENST00000550442	ZNF274	Q96GC6	653 aa	Predicted RBP	13.96	□□□□□ -0.17
LETMD1-223	ENST00000550442	CAPNS2	Q96L46	248 aa		13.96	□□□□□ -0.17
LETMD1-223	ENST00000550442	GPR101	Q96P66	508 aa	Predicted RBP	13.96	□□□□□ -0.17
LETMD1-223	ENST00000550442	AGXT2	Q9BYV1	514 aa		13.96	□□□□□ -0.17
LETMD1-223	ENST00000550442	HACL1	Q9UJ83	578 aa		13.96	□□□□□ -0.17
LETMD1-223	ENST00000550442	ZNF652	Q9Y2D9	606 aa		13.96	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms