RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 NAPGQ99747 312 aaPredicted RBP17.94■□□□□ 0.46
RBFOX1-212ENST00000550418 ELP1O95163 1332 aa17.94■□□□□ 0.46
RBFOX1-212ENST00000550418 A0A1W2PP64 1363 aa17.93■□□□□ 0.46
RBFOX1-212ENST00000550418 MKNK2Q9HBH9 465 aa17.93■□□□□ 0.46
RBFOX1-212ENST00000550418 EXOC1Q9NV70 894 aa17.93■□□□□ 0.46
RBFOX1-212ENST00000550418 TCERG1LQ5VWI1 586 aa17.93■□□□□ 0.46
RBFOX1-212ENST00000550418 SELENOOQ9BVL4 669 aa17.93■□□□□ 0.46
RBFOX1-212ENST00000550418 GRM8O00222 908 aa17.93■□□□□ 0.46
RBFOX1-212ENST00000550418 RSRC1Q96IZ7 334 aaKnown RBP17.93■□□□□ 0.46
RBFOX1-212ENST00000550418 PPIP5K1Q6PFW1 1433 aa17.93■□□□□ 0.46
RBFOX1-212ENST00000550418 SPATA31E1Q6ZUB1 1445 aa17.92■□□□□ 0.46
RBFOX1-212ENST00000550418 TRIM75PA6NK02 468 aa17.92■□□□□ 0.46
RBFOX1-212ENST00000550418 ATP5J2-PTCD1G3V325 749 aa17.92■□□□□ 0.46
RBFOX1-212ENST00000550418 PTCD1O75127 700 aaKnown RBP17.92■□□□□ 0.46
RBFOX1-212ENST00000550418 RPS6KB1P23443 525 aa17.92■□□□□ 0.46
RBFOX1-212ENST00000550418 ZNF76P36508 570 aa17.92■□□□□ 0.46
RBFOX1-212ENST00000550418 CCDC122Q5T0U0 273 aa17.92■□□□□ 0.46
RBFOX1-212ENST00000550418 UBXN1Q04323 297 aa17.92■□□□□ 0.46
RBFOX1-212ENST00000550418 NAA25Q14CX7 972 aa17.92■□□□□ 0.46
RBFOX1-212ENST00000550418 WTAPQ15007 396 aa17.92■□□□□ 0.46
RBFOX1-212ENST00000550418 PUS7Q96PZ0 661 aaKnown RBP17.92■□□□□ 0.46
RBFOX1-212ENST00000550418 ZNF287Q9HBT7 754 aa17.92■□□□□ 0.46
RBFOX1-212ENST00000550418 NBPF7P0C2Y1 421 aaPredicted RBP17.92■□□□□ 0.46
RBFOX1-212ENST00000550418 POTEJP0CG39 1038 aa17.92■□□□□ 0.46
RBFOX1-212ENST00000550418 STAT6P42226 847 aa17.92■□□□□ 0.46
RBFOX1-212ENST00000550418 CCDC6Q16204 474 aa17.92■□□□□ 0.46
RBFOX1-212ENST00000550418 CHST3Q7LGC8 479 aa17.92■□□□□ 0.46
RBFOX1-212ENST00000550418 SPAG5Q96R06 1193 aa17.92■□□□□ 0.46
RBFOX1-212ENST00000550418 MACROD2A1Z1Q3 448 aa17.91■□□□□ 0.46
RBFOX1-212ENST00000550418 A6NNZ2 444 aa17.91■□□□□ 0.46
RBFOX1-212ENST00000550418 TUBB8Q3ZCM7 444 aa17.91■□□□□ 0.46
RBFOX1-212ENST00000550418 IFT81Q8WYA0 676 aa17.91■□□□□ 0.46
RBFOX1-212ENST00000550418 TTF2Q9UNY4 1162 aaKnown RBP17.91■□□□□ 0.46
RBFOX1-212ENST00000550418 GOLGA6CA6NDK9 693 aa17.91■□□□□ 0.46
RBFOX1-212ENST00000550418 GOLGA6DP0CG33 693 aa17.91■□□□□ 0.46
RBFOX1-212ENST00000550418 GPR161Q8N6U8 529 aaKnown RBP17.91■□□□□ 0.46
RBFOX1-212ENST00000550418 IGSF22Q8N9C0 903 aa17.91■□□□□ 0.46
RBFOX1-212ENST00000550418 GOLGA6AQ9NYA3 693 aa17.91■□□□□ 0.46
RBFOX1-212ENST00000550418 PYCARDQ9ULZ3 195 aa17.91■□□□□ 0.46
RBFOX1-212ENST00000550418 GCC2Q8IWJ2 1684 aa17.91■□□□□ 0.46
RBFOX1-212ENST00000550418 RTN1Q16799 776 aa17.91■□□□□ 0.46
RBFOX1-212ENST00000550418 MAST1Q9Y2H9 1570 aa17.91■□□□□ 0.46
RBFOX1-212ENST00000550418 TMEM132AQ24JP5 1023 aa17.9■□□□□ 0.46
RBFOX1-212ENST00000550418 NEK11Q8NG66 645 aa17.9■□□□□ 0.46
RBFOX1-212ENST00000550418 KIF5BP33176 963 aa17.9■□□□□ 0.46
RBFOX1-212ENST00000550418 TMTC2Q8N394 836 aa17.9■□□□□ 0.46
RBFOX1-212ENST00000550418 KIF4AO95239 1232 aa17.9■□□□□ 0.46
RBFOX1-212ENST00000550418 GSPT1P15170 499 aaKnown RBP17.9■□□□□ 0.46
RBFOX1-212ENST00000550418 C6orf163Q5TEZ5 329 aa17.9■□□□□ 0.46
RBFOX1-212ENST00000550418 CDC37L1Q7L3B6 337 aa17.9■□□□□ 0.46
RBFOX1-212ENST00000550418 HOOK3Q86VS8 718 aa17.9■□□□□ 0.46
RBFOX1-212ENST00000550418 JARID2Q92833 1246 aaPredicted RBP17.9■□□□□ 0.46
RBFOX1-212ENST00000550418 TRIM35Q9UPQ4 493 aa17.9■□□□□ 0.46
RBFOX1-212ENST00000550418 KRI1Q8N9T8 703 aaKnown RBP17.9■□□□□ 0.46
RBFOX1-212ENST00000550418 MMRN2Q9H8L6 949 aa17.9■□□□□ 0.46
RBFOX1-212ENST00000550418 AOX1Q06278 1338 aa17.89■□□□□ 0.45
RBFOX1-212ENST00000550418 SLC5A1P13866 664 aa17.89■□□□□ 0.45
RBFOX1-212ENST00000550418 KSR2Q6VAB6 950 aa17.89■□□□□ 0.45
RBFOX1-212ENST00000550418 LDHAL6AQ6ZMR3 332 aa17.89■□□□□ 0.45
RBFOX1-212ENST00000550418 CHAMP1Q96JM3 812 aa17.89■□□□□ 0.45
RBFOX1-212ENST00000550418 DNAJC5Q9H3Z4 198 aa17.89■□□□□ 0.45
RBFOX1-212ENST00000550418 LLPHQ9BRT6 129 aaKnown RBP17.89■□□□□ 0.45
RBFOX1-212ENST00000550418 EIF2AK4Q9P2K8 1649 aaKnown RBP17.89■□□□□ 0.45
RBFOX1-212ENST00000550418 STARD3NLO95772 234 aa17.88■□□□□ 0.45
RBFOX1-212ENST00000550418 ANKRD18BA2A2Z9 1011 aa17.88■□□□□ 0.45
RBFOX1-212ENST00000550418 SLC27A2O14975 620 aa17.88■□□□□ 0.45
RBFOX1-212ENST00000550418 ETF1P62495 437 aaKnown RBP17.88■□□□□ 0.45
RBFOX1-212ENST00000550418 ANKRD13DQ6ZTN6 518 aa17.88■□□□□ 0.45
RBFOX1-212ENST00000550418 KRT23Q9C075 422 aa17.88■□□□□ 0.45
RBFOX1-212ENST00000550418 EIF4A2Q14240 407 aaKnown RBP17.88■□□□□ 0.45
RBFOX1-212ENST00000550418 BRD3Q15059 726 aa17.88■□□□□ 0.45
RBFOX1-212ENST00000550418 DTNBO60941 627 aa17.88■□□□□ 0.45
RBFOX1-212ENST00000550418 SPTY2D1Q68D10 685 aaPredicted RBP17.88■□□□□ 0.45
RBFOX1-212ENST00000550418 KRT28Q7Z3Y7 464 aa17.88■□□□□ 0.45
RBFOX1-212ENST00000550418 XPO4Q9C0E2 1151 aaKnown RBP17.88■□□□□ 0.45
RBFOX1-212ENST00000550418 STMN4Q9H169 189 aaPredicted RBP17.88■□□□□ 0.45
RBFOX1-212ENST00000550418 CWC25Q9NXE8 425 aaPredicted RBP17.88■□□□□ 0.45
RBFOX1-212ENST00000550418 ERCC6L2Q5T890 1561 aa17.88■□□□□ 0.45
RBFOX1-212ENST00000550418 YTHDC2Q9H6S0 1430 aaKnown RBP17.88■□□□□ 0.45
RBFOX1-212ENST00000550418 CHRNA2Q15822 529 aa17.87■□□□□ 0.45
RBFOX1-212ENST00000550418 KCNA6P17658 529 aa17.87■□□□□ 0.45
RBFOX1-212ENST00000550418 CAVIN4Q5BKX8 364 aa17.87■□□□□ 0.45
RBFOX1-212ENST00000550418 LRRC27Q9C0I9 530 aa17.87■□□□□ 0.45
RBFOX1-212ENST00000550418 SAMD9LQ8IVG5 1584 aa17.87■□□□□ 0.45
RBFOX1-212ENST00000550418 NLRP12P59046 1061 aa17.87■□□□□ 0.45
RBFOX1-212ENST00000550418 SELENOSQ9BQE4 189 aa17.87■□□□□ 0.45
RBFOX1-212ENST00000550418 PAG1Q9NWQ8 432 aa17.87■□□□□ 0.45
RBFOX1-212ENST00000550418 CETN1Q12798 172 aa17.87■□□□□ 0.45
RBFOX1-212ENST00000550418 ANO1Q5XXA6 986 aa17.87■□□□□ 0.45
RBFOX1-212ENST00000550418 LRRC8AQ8IWT6 810 aa17.87■□□□□ 0.45
RBFOX1-212ENST00000550418 ZNF444Q8N0Y2 327 aaPredicted RBP17.87■□□□□ 0.45
RBFOX1-212ENST00000550418 LINS1Q8NG48 757 aa17.87■□□□□ 0.45
RBFOX1-212ENST00000550418 KIAA1524Q8TCG1 905 aa17.87■□□□□ 0.45
RBFOX1-212ENST00000550418 ERBB4Q15303 1308 aa17.87■□□□□ 0.45
RBFOX1-212ENST00000550418 MAP2K2P36507 400 aa17.86■□□□□ 0.45
RBFOX1-212ENST00000550418 MRFAP1L1Q96HT8 127 aa17.86■□□□□ 0.45
RBFOX1-212ENST00000550418 ZBTB3Q9H5J0 574 aa17.86■□□□□ 0.45
RBFOX1-212ENST00000550418 CNNM2Q9H8M5 875 aa17.86■□□□□ 0.45
RBFOX1-212ENST00000550418 NPATQ14207 1427 aa17.86■□□□□ 0.45
RBFOX1-212ENST00000550418 ARHGAP25P42331 645 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms