RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 USP44Q9H0E7 712 aa16.95■□□□□ 0.3
GCN1-206ENST00000549815 HDAC9Q9UKV0 1011 aa16.95■□□□□ 0.3
GCN1-206ENST00000549815 ECM29Q5VYK3 1845 aa16.94■□□□□ 0.3
GCN1-206ENST00000549815 KIF23Q02241 960 aaPredicted RBP16.94■□□□□ 0.3
GCN1-206ENST00000549815 UBE4AQ14139 1066 aa16.94■□□□□ 0.3
GCN1-206ENST00000549815 MOB2Q70IA6 237 aa16.94■□□□□ 0.3
GCN1-206ENST00000549815 MTMR14Q8NCE2 650 aa16.94■□□□□ 0.3
GCN1-206ENST00000549815 RASAL3Q86YV0 1011 aa16.93■□□□□ 0.3
GCN1-206ENST00000549815 TDRD7Q8NHU6 1098 aaKnown RBP16.93■□□□□ 0.3
GCN1-206ENST00000549815 PCDHAC2Q9Y5I4 1007 aa16.93■□□□□ 0.3
GCN1-206ENST00000549815 FAM205AQ6ZU69 1335 aa16.93■□□□□ 0.3
GCN1-206ENST00000549815 CASP8AP2Q9UKL3 1982 aa16.92■□□□□ 0.3
GCN1-206ENST00000549815 LRRC24Q50LG9 513 aa16.92■□□□□ 0.3
GCN1-206ENST00000549815 FAM84BQ96KN1 310 aaPredicted RBP16.92■□□□□ 0.3
GCN1-206ENST00000549815 JAG2Q9Y219 1238 aa16.92■□□□□ 0.3
GCN1-206ENST00000549815 MROH5Q6ZUA9 1318 aa16.92■□□□□ 0.3
GCN1-206ENST00000549815 ARAP2Q8WZ64 1704 aa16.91■□□□□ 0.3
GCN1-206ENST00000549815 CT47B1P0C2W7 299 aaPredicted RBP16.91■□□□□ 0.3
GCN1-206ENST00000549815 GYG1P46976 350 aa16.91■□□□□ 0.3
GCN1-206ENST00000549815 APOBEC3FQ8IUX4 373 aaKnown RBP16.91■□□□□ 0.3
GCN1-206ENST00000549815 VGLL2Q8N8G2 317 aa16.91■□□□□ 0.3
GCN1-206ENST00000549815 CSRNP1Q96S65 589 aa16.91■□□□□ 0.3
GCN1-206ENST00000549815 SMC4Q9NTJ3 1288 aa16.91■□□□□ 0.3
GCN1-206ENST00000549815 COL1A1P02452 1464 aaPredicted RBP16.91■□□□□ 0.3
GCN1-206ENST00000549815 AKAP11Q9UKA4 1901 aa16.9■□□□□ 0.3
GCN1-206ENST00000549815 UBE2Q2LH0YL09 131 aa16.9■□□□□ 0.3
GCN1-206ENST00000549815 HIBADHP31937 336 aaKnown RBP16.9■□□□□ 0.3
GCN1-206ENST00000549815 RFX5P48382 616 aaPredicted RBP16.9■□□□□ 0.3
GCN1-206ENST00000549815 DLGAP5Q15398 846 aa16.9■□□□□ 0.3
GCN1-206ENST00000549815 SAGE1Q9NXZ1 904 aa16.9■□□□□ 0.3
GCN1-206ENST00000549815 AOX1Q06278 1338 aa16.9■□□□□ 0.3
GCN1-206ENST00000549815 SPDYE2BA6NHP3 402 aa16.89■□□□□ 0.29
GCN1-206ENST00000549815 F8W031 263 aaPredicted RBP16.89■□□□□ 0.29
GCN1-206ENST00000549815 SPDYE6P0CI01 402 aa16.89■□□□□ 0.29
GCN1-206ENST00000549815 CFAP100Q494V2 611 aa16.89■□□□□ 0.29
GCN1-206ENST00000549815 KLHDC4Q8TBB5 520 aa16.89■□□□□ 0.29
GCN1-206ENST00000549815 ABHD8Q96I13 439 aa16.89■□□□□ 0.29
GCN1-206ENST00000549815 PRMT6Q96LA8 375 aaPredicted RBP16.89■□□□□ 0.29
GCN1-206ENST00000549815 RNF186Q9NXI6 227 aa16.89■□□□□ 0.29
GCN1-206ENST00000549815 PDE8BO95263 885 aa16.88■□□□□ 0.29
GCN1-206ENST00000549815 FBXO33Q7Z6M2 555 aa16.88■□□□□ 0.29
GCN1-206ENST00000549815 SSC5DA1L4H1 1573 aa16.88■□□□□ 0.29
GCN1-206ENST00000549815 NF2P35240 595 aa16.87■□□□□ 0.29
GCN1-206ENST00000549815 METTL24Q5JXM2 366 aa16.87■□□□□ 0.29
GCN1-206ENST00000549815 MFSD14BQ5SR56 506 aa16.87■□□□□ 0.29
GCN1-206ENST00000549815 REM2Q8IYK8 340 aaPredicted RBP16.87■□□□□ 0.29
GCN1-206ENST00000549815 DEFB129Q9H1M3 183 aa16.87■□□□□ 0.29
GCN1-206ENST00000549815 NOB1Q9ULX3 412 aaKnown RBP16.87■□□□□ 0.29
GCN1-206ENST00000549815 FGFR2P21802 821 aa16.86■□□□□ 0.29
GCN1-206ENST00000549815 PTPN12Q05209 780 aaKnown RBP16.86■□□□□ 0.29
GCN1-206ENST00000549815 LDLRAD1Q5T700 205 aa16.86■□□□□ 0.29
GCN1-206ENST00000549815 PPP2R3BQ9Y5P8 575 aa16.86■□□□□ 0.29
GCN1-206ENST00000549815 CLRN2A0PK11 232 aa16.85■□□□□ 0.29
GCN1-206ENST00000549815 TRPA1O75762 1119 aa16.85■□□□□ 0.29
GCN1-206ENST00000549815 RARSP54136 660 aaKnown RBP16.85■□□□□ 0.29
GCN1-206ENST00000549815 TTLL12Q14166 644 aaPredicted RBP16.85■□□□□ 0.29
GCN1-206ENST00000549815 MAP3K11Q16584 847 aa16.85■□□□□ 0.29
GCN1-206ENST00000549815 SERPINA10Q9UK55 444 aa16.85■□□□□ 0.29
GCN1-206ENST00000549815 FZD1Q9UP38 647 aa16.85■□□□□ 0.29
GCN1-206ENST00000549815 EYA2O00167 538 aa16.84■□□□□ 0.29
GCN1-206ENST00000549815 PRKG1Q13976 671 aa16.84■□□□□ 0.29
GCN1-206ENST00000549815 GRIK5Q16478 980 aa16.84■□□□□ 0.29
GCN1-206ENST00000549815 ARMC9Q7Z3E5 817 aa16.84■□□□□ 0.29
GCN1-206ENST00000549815 API5Q9BZZ5 524 aaKnown RBP16.84■□□□□ 0.29
GCN1-206ENST00000549815 MCOLN1Q9GZU1 580 aa16.84■□□□□ 0.29
GCN1-206ENST00000549815 TTF2Q9UNY4 1162 aaKnown RBP16.84■□□□□ 0.29
GCN1-206ENST00000549815 KIF16BQ96L93 1317 aa16.84■□□□□ 0.29
GCN1-206ENST00000549815 MYO1BO43795 1136 aa16.83■□□□□ 0.28
GCN1-206ENST00000549815 LAMB1P07942 1786 aa16.83■□□□□ 0.28
GCN1-206ENST00000549815 TM4SF4P48230 202 aa16.83■□□□□ 0.28
GCN1-206ENST00000549815 SPDYE2Q495Y8 402 aa16.83■□□□□ 0.28
GCN1-206ENST00000549815 ATG9AQ7Z3C6 839 aa16.83■□□□□ 0.28
GCN1-206ENST00000549815 ANGEL1Q9UNK9 670 aaKnown RBP16.83■□□□□ 0.28
GCN1-206ENST00000549815 IQSEC3Q9UPP2 1182 aaPredicted RBP16.83■□□□□ 0.28
GCN1-206ENST00000549815 UBTFL1P0CB47 393 aaPredicted RBP16.82■□□□□ 0.28
GCN1-206ENST00000549815 BCAMP50895 628 aa16.82■□□□□ 0.28
GCN1-206ENST00000549815 PUM3Q15397 648 aaKnown RBP16.82■□□□□ 0.28
GCN1-206ENST00000549815 CAVIN4Q5BKX8 364 aa16.82■□□□□ 0.28
GCN1-206ENST00000549815 VEZTQ9HBM0 779 aa16.82■□□□□ 0.28
GCN1-206ENST00000549815 ZNF70Q9UC06 446 aaPredicted RBP16.82■□□□□ 0.28
GCN1-206ENST00000549815 CRKP46108 304 aa16.81■□□□□ 0.28
GCN1-206ENST00000549815 RBM5P52756 815 aaKnown RBP eCLIP16.81■□□□□ 0.28
GCN1-206ENST00000549815 RASA3Q14644 834 aa16.81■□□□□ 0.28
GCN1-206ENST00000549815 NBPF12Q5TAG4 269 aaPredicted RBP16.81■□□□□ 0.28
GCN1-206ENST00000549815 SPRYD7Q5W111 196 aa16.81■□□□□ 0.28
GCN1-206ENST00000549815 VPS37DQ86XT2 251 aa16.81■□□□□ 0.28
GCN1-206ENST00000549815 DZIP1LQ8IYY4 767 aaKnown RBP16.81■□□□□ 0.28
GCN1-206ENST00000549815 ARHGAP45Q92619 1136 aa16.81■□□□□ 0.28
GCN1-206ENST00000549815 TDRD3Q9H7E2 651 aaKnown RBP16.81■□□□□ 0.28
GCN1-206ENST00000549815 FBXO3Q9UK99 471 aa16.81■□□□□ 0.28
GCN1-206ENST00000549815 HDLBPQ00341 1268 aaKnown RBP16.8■□□□□ 0.28
GCN1-206ENST00000549815 MKRN3Q13064 507 aaKnown RBP16.8■□□□□ 0.28
GCN1-206ENST00000549815 CHAF1AQ13111 956 aaPredicted RBP16.8■□□□□ 0.28
GCN1-206ENST00000549815 DGKZQ13574 1117 aa16.8■□□□□ 0.28
GCN1-206ENST00000549815 TBC1D22AQ8WUA7 517 aa16.8■□□□□ 0.28
GCN1-206ENST00000549815 LRRFIP2Q9Y608 721 aaKnown RBP16.8■□□□□ 0.28
GCN1-206ENST00000549815 MYH13Q9UKX3 1938 aa16.8■□□□□ 0.28
GCN1-206ENST00000549815 OTOFQ9HC10 1997 aa16.79■□□□□ 0.28
GCN1-206ENST00000549815 PPP1R12BO60237 982 aaPredicted RBP16.79■□□□□ 0.28
GCN1-206ENST00000549815 USP2O75604 605 aaPredicted RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms