RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 SSH1Q8WYL5 1049 aa21.97■■□□□ 1.11
CHMP1A-205ENST00000548650 LAMB1P07942 1786 aa21.97■■□□□ 1.11
CHMP1A-205ENST00000548650 SSC5DA1L4H1 1573 aa21.96■■□□□ 1.11
CHMP1A-205ENST00000548650 PLIN1O60240 522 aa21.96■■□□□ 1.11
CHMP1A-205ENST00000548650 FKBP1AP62942 108 aaKnown RBP21.96■■□□□ 1.11
CHMP1A-205ENST00000548650 SLFN5Q08AF3 891 aa21.96■■□□□ 1.11
CHMP1A-205ENST00000548650 ANKRD44Q8N8A2 993 aa21.96■■□□□ 1.11
CHMP1A-205ENST00000548650 MTMR14Q8NCE2 650 aa21.96■■□□□ 1.11
CHMP1A-205ENST00000548650 CSRNP1Q96S65 589 aa21.96■■□□□ 1.11
CHMP1A-205ENST00000548650 PUS3Q9BZE2 481 aaKnown RBP21.96■■□□□ 1.11
CHMP1A-205ENST00000548650 BICC1Q9H694 974 aaKnown RBP21.96■■□□□ 1.11
CHMP1A-205ENST00000548650 RNF186Q9NXI6 227 aa21.96■■□□□ 1.11
CHMP1A-205ENST00000548650 UBE2Q2LH0YL09 131 aa21.95■■□□□ 1.1
CHMP1A-205ENST00000548650 MCOLN1Q9GZU1 580 aa21.95■■□□□ 1.1
CHMP1A-205ENST00000548650 JAG2Q9Y219 1238 aa21.95■■□□□ 1.1
CHMP1A-205ENST00000548650 PCDHAC2Q9Y5I4 1007 aa21.95■■□□□ 1.1
CHMP1A-205ENST00000548650 NF2P35240 595 aa21.94■■□□□ 1.1
CHMP1A-205ENST00000548650 DLGAP5Q15398 846 aa21.94■■□□□ 1.1
CHMP1A-205ENST00000548650 F8W031 263 aaPredicted RBP21.93■■□□□ 1.1
CHMP1A-205ENST00000548650 TRPA1O75762 1119 aa21.93■■□□□ 1.1
CHMP1A-205ENST00000548650 UBE4AQ14139 1066 aa21.93■■□□□ 1.1
CHMP1A-205ENST00000548650 FAM205AQ6ZU69 1335 aa21.93■■□□□ 1.1
CHMP1A-205ENST00000548650 OTOFQ9HC10 1997 aa21.93■■□□□ 1.1
CHMP1A-205ENST00000548650 AOX1Q06278 1338 aa21.92■■□□□ 1.1
CHMP1A-205ENST00000548650 SPDYE2BA6NHP3 402 aa21.92■■□□□ 1.1
CHMP1A-205ENST00000548650 SPDYE6P0CI01 402 aa21.92■■□□□ 1.1
CHMP1A-205ENST00000548650 GYG1P46976 350 aa21.92■■□□□ 1.1
CHMP1A-205ENST00000548650 TTLL12Q14166 644 aaPredicted RBP21.92■■□□□ 1.1
CHMP1A-205ENST00000548650 REM2Q8IYK8 340 aaPredicted RBP21.92■■□□□ 1.1
CHMP1A-205ENST00000548650 TDRD7Q8NHU6 1098 aaKnown RBP21.92■■□□□ 1.1
CHMP1A-205ENST00000548650 CDCA7LQ96GN5 454 aa21.92■■□□□ 1.1
CHMP1A-205ENST00000548650 RIPOR2Q9Y4F9 1068 aa21.92■■□□□ 1.1
CHMP1A-205ENST00000548650 MROH5Q6ZUA9 1318 aa21.91■■□□□ 1.1
CHMP1A-205ENST00000548650 MYH13Q9UKX3 1938 aa21.91■■□□□ 1.1
CHMP1A-205ENST00000548650 CFAP100Q494V2 611 aa21.91■■□□□ 1.1
CHMP1A-205ENST00000548650 DGKZQ13574 1117 aa21.9■■□□□ 1.1
CHMP1A-205ENST00000548650 FAM84BQ96KN1 310 aaPredicted RBP21.9■■□□□ 1.1
CHMP1A-205ENST00000548650 USP44Q9H0E7 712 aa21.9■■□□□ 1.1
CHMP1A-205ENST00000548650 DEFB129Q9H1M3 183 aa21.9■■□□□ 1.1
CHMP1A-205ENST00000548650 PPP2R3BQ9Y5P8 575 aa21.9■■□□□ 1.1
CHMP1A-205ENST00000548650 CLRN2A0PK11 232 aa21.89■■□□□ 1.09
CHMP1A-205ENST00000548650 HIBADHP31937 336 aaKnown RBP21.89■■□□□ 1.09
CHMP1A-205ENST00000548650 ALDH1L2Q3SY69 923 aa21.89■■□□□ 1.09
CHMP1A-205ENST00000548650 LRRC24Q50LG9 513 aa21.89■■□□□ 1.09
CHMP1A-205ENST00000548650 MFSD14BQ5SR56 506 aa21.89■■□□□ 1.09
CHMP1A-205ENST00000548650 VGLL2Q8N8G2 317 aa21.89■■□□□ 1.09
CHMP1A-205ENST00000548650 CCDC85CA6NKD9 419 aa21.88■■□□□ 1.09
CHMP1A-205ENST00000548650 PTPN12Q05209 780 aaKnown RBP21.88■■□□□ 1.09
CHMP1A-205ENST00000548650 PRKG1Q13976 671 aa21.88■■□□□ 1.09
CHMP1A-205ENST00000548650 LDLRAD1Q5T700 205 aa21.88■■□□□ 1.09
CHMP1A-205ENST00000548650 ARMC9Q7Z3E5 817 aa21.88■■□□□ 1.09
CHMP1A-205ENST00000548650 TRMT2AQ8IZ69 625 aaKnown RBP21.88■■□□□ 1.09
CHMP1A-205ENST00000548650 PRMT6Q96LA8 375 aaPredicted RBP21.88■■□□□ 1.09
CHMP1A-205ENST00000548650 SMC4Q9NTJ3 1288 aa21.88■■□□□ 1.09
CHMP1A-205ENST00000548650 FZD1Q9UP38 647 aa21.88■■□□□ 1.09
CHMP1A-205ENST00000548650 MYO1BO43795 1136 aa21.87■■□□□ 1.09
CHMP1A-205ENST00000548650 KLHDC4Q8TBB5 520 aa21.87■■□□□ 1.09
CHMP1A-205ENST00000548650 ANGEL1Q9UNK9 670 aaKnown RBP21.87■■□□□ 1.09
CHMP1A-205ENST00000548650 METTL24Q5JXM2 366 aa21.86■■□□□ 1.09
CHMP1A-205ENST00000548650 MKRN3Q13064 507 aaKnown RBP21.85■■□□□ 1.09
CHMP1A-205ENST00000548650 MAP3K11Q16584 847 aa21.85■■□□□ 1.09
CHMP1A-205ENST00000548650 FBXO33Q7Z6M2 555 aa21.85■■□□□ 1.09
CHMP1A-205ENST00000548650 VEZTQ9HBM0 779 aa21.85■■□□□ 1.09
CHMP1A-205ENST00000548650 SERPINA10Q9UK55 444 aa21.85■■□□□ 1.09
CHMP1A-205ENST00000548650 TTF2Q9UNY4 1162 aaKnown RBP21.85■■□□□ 1.09
CHMP1A-205ENST00000548650 PDE8BO95263 885 aa21.84■■□□□ 1.09
CHMP1A-205ENST00000548650 TM4SF4P48230 202 aa21.83■■□□□ 1.09
CHMP1A-205ENST00000548650 RFX5P48382 616 aaPredicted RBP21.83■■□□□ 1.09
CHMP1A-205ENST00000548650 RBM5P52756 815 aaKnown RBP eCLIP21.83■■□□□ 1.09
CHMP1A-205ENST00000548650 SPDYE2Q495Y8 402 aa21.83■■□□□ 1.09
CHMP1A-205ENST00000548650 SPRYD7Q5W111 196 aa21.83■■□□□ 1.09
CHMP1A-205ENST00000548650 IQSEC3Q9UPP2 1182 aaPredicted RBP21.83■■□□□ 1.09
CHMP1A-205ENST00000548650 KIF16BQ96L93 1317 aa21.82■■□□□ 1.08
CHMP1A-205ENST00000548650 CCER2I3L3R5 266 aa21.82■■□□□ 1.08
CHMP1A-205ENST00000548650 CT47B1P0C2W7 299 aaPredicted RBP21.82■■□□□ 1.08
CHMP1A-205ENST00000548650 SREBF2Q12772 1141 aa21.82■■□□□ 1.08
CHMP1A-205ENST00000548650 GRIK5Q16478 980 aa21.82■■□□□ 1.08
CHMP1A-205ENST00000548650 RASA3Q14644 834 aa21.81■■□□□ 1.08
CHMP1A-205ENST00000548650 NBPF12Q5TAG4 269 aaPredicted RBP21.81■■□□□ 1.08
CHMP1A-205ENST00000548650 VPS37DQ86XT2 251 aa21.81■■□□□ 1.08
CHMP1A-205ENST00000548650 CLMNQ96JQ2 1002 aa21.81■■□□□ 1.08
CHMP1A-205ENST00000548650 ZNF70Q9UC06 446 aaPredicted RBP21.81■■□□□ 1.08
CHMP1A-205ENST00000548650 PPP1R12BO60237 982 aaPredicted RBP21.8■■□□□ 1.08
CHMP1A-205ENST00000548650 TBC1D8O95759 1140 aa21.8■■□□□ 1.08
CHMP1A-205ENST00000548650 FGFR2P21802 821 aa21.8■■□□□ 1.08
CHMP1A-205ENST00000548650 CRKP46108 304 aa21.8■■□□□ 1.08
CHMP1A-205ENST00000548650 CHAF1AQ13111 956 aaPredicted RBP21.8■■□□□ 1.08
CHMP1A-205ENST00000548650 PUM3Q15397 648 aaKnown RBP21.8■■□□□ 1.08
CHMP1A-205ENST00000548650 SUPT20HL1Q3ZLR7 823 aa21.8■■□□□ 1.08
CHMP1A-205ENST00000548650 CAVIN4Q5BKX8 364 aa21.8■■□□□ 1.08
CHMP1A-205ENST00000548650 CTU1Q7Z7A3 348 aaKnown RBP21.8■■□□□ 1.08
CHMP1A-205ENST00000548650 DZIP1LQ8IYY4 767 aaKnown RBP21.8■■□□□ 1.08
CHMP1A-205ENST00000548650 EYA2O00167 538 aa21.79■■□□□ 1.08
CHMP1A-205ENST00000548650 RGS19P49795 217 aa21.79■■□□□ 1.08
CHMP1A-205ENST00000548650 TNFAIP1Q13829 316 aa21.79■■□□□ 1.08
CHMP1A-205ENST00000548650 CDAN1Q8IWY9 1227 aa21.79■■□□□ 1.08
CHMP1A-205ENST00000548650 TBC1D22AQ8WUA7 517 aa21.79■■□□□ 1.08
CHMP1A-205ENST00000548650 CFHR5Q9BXR6 569 aa21.79■■□□□ 1.08
CHMP1A-205ENST00000548650 TDRD3Q9H7E2 651 aaKnown RBP21.79■■□□□ 1.08
CHMP1A-205ENST00000548650 UNCXA6NJT0 531 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms