RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 CLMNQ96JQ2 1002 aa21.01■□□□□ 0.95
SSH1-208ENST00000548522 DEFB129Q9H1M3 183 aa21.01■□□□□ 0.95
SSH1-208ENST00000548522 CLRN2A0PK11 232 aa21■□□□□ 0.95
SSH1-208ENST00000548522 ZNF316A6NFI3 1004 aaPredicted RBP21■□□□□ 0.95
SSH1-208ENST00000548522 EPHA10Q5JZY3 1008 aa21■□□□□ 0.95
SSH1-208ENST00000548522 CHMP3Q9Y3E7 222 aa21■□□□□ 0.95
SSH1-208ENST00000548522 SALL2Q9Y467 1007 aaPredicted RBP21■□□□□ 0.95
SSH1-208ENST00000548522 COL1A1P02452 1464 aaPredicted RBP21■□□□□ 0.95
SSH1-208ENST00000548522 VAMP4O75379 141 aa20.99■□□□□ 0.95
SSH1-208ENST00000548522 DLGAP5Q15398 846 aa20.99■□□□□ 0.95
SSH1-208ENST00000548522 PKN2Q16513 984 aaKnown RBP20.99■□□□□ 0.95
SSH1-208ENST00000548522 ZNF594Q96JF6 807 aaPredicted RBP20.99■□□□□ 0.95
SSH1-208ENST00000548522 MMP14P50281 582 aa20.98■□□□□ 0.95
SSH1-208ENST00000548522 EXOSC9Q06265 439 aaKnown RBP20.98■□□□□ 0.95
SSH1-208ENST00000548522 IFIT5Q13325 482 aaKnown RBP20.98■□□□□ 0.95
SSH1-208ENST00000548522 NOM1Q5C9Z4 860 aaKnown RBP20.98■□□□□ 0.95
SSH1-208ENST00000548522 CFHR5Q9BXR6 569 aa20.98■□□□□ 0.95
SSH1-208ENST00000548522 SPDYE2BA6NHP3 402 aa20.97■□□□□ 0.95
SSH1-208ENST00000548522 SPDYE6P0CI01 402 aa20.97■□□□□ 0.95
SSH1-208ENST00000548522 CFAP100Q494V2 611 aa20.97■□□□□ 0.95
SSH1-208ENST00000548522 BEND3Q5T5X7 828 aa20.97■□□□□ 0.95
SSH1-208ENST00000548522 C15orf52Q6ZUT6 534 aaKnown RBP20.97■□□□□ 0.95
SSH1-208ENST00000548522 MTMR14Q8NCE2 650 aa20.97■□□□□ 0.95
SSH1-208ENST00000548522 FKTNO75072 461 aa20.96■□□□□ 0.95
SSH1-208ENST00000548522 IL1R1P14778 569 aa20.96■□□□□ 0.95
SSH1-208ENST00000548522 FBXO46Q6PJ61 603 aaPredicted RBP20.96■□□□□ 0.95
SSH1-208ENST00000548522 LMBR1LQ6UX01 489 aa20.96■□□□□ 0.95
SSH1-208ENST00000548522 PRMT6Q96LA8 375 aaPredicted RBP20.96■□□□□ 0.95
SSH1-208ENST00000548522 VEZTQ9HBM0 779 aa20.96■□□□□ 0.95
SSH1-208ENST00000548522 SPINK5Q9NQ38 1064 aaPredicted RBP20.96■□□□□ 0.95
SSH1-208ENST00000548522 IGF2BP3O00425 579 aaKnown RBP eCLIP20.95■□□□□ 0.94
SSH1-208ENST00000548522 MAP3K11Q16584 847 aa20.95■□□□□ 0.94
SSH1-208ENST00000548522 NBPF12Q5TAG4 269 aaPredicted RBP20.95■□□□□ 0.94
SSH1-208ENST00000548522 ZNF804AQ7Z570 1209 aa20.95■□□□□ 0.94
SSH1-208ENST00000548522 WNK4Q96J92 1243 aa20.95■□□□□ 0.94
SSH1-208ENST00000548522 PLIN1O60240 522 aa20.94■□□□□ 0.94
SSH1-208ENST00000548522 GJA5P36382 358 aa20.94■□□□□ 0.94
SSH1-208ENST00000548522 PRPF38BQ5VTL8 546 aaKnown RBP20.94■□□□□ 0.94
SSH1-208ENST00000548522 IFNL1Q8IU54 200 aa20.94■□□□□ 0.94
SSH1-208ENST00000548522 SLC10A4Q96EP9 437 aa20.94■□□□□ 0.94
SSH1-208ENST00000548522 CDAN1Q8IWY9 1227 aa20.93■□□□□ 0.94
SSH1-208ENST00000548522 MRS2Q9HD23 443 aa20.93■□□□□ 0.94
SSH1-208ENST00000548522 MANSC4A6NHS7 340 aaPredicted RBP20.92■□□□□ 0.94
SSH1-208ENST00000548522 PPP2R3BQ9Y5P8 575 aa20.92■□□□□ 0.94
SSH1-208ENST00000548522 GRM8O00222 908 aa20.91■□□□□ 0.94
SSH1-208ENST00000548522 PPP1R12BO60237 982 aaPredicted RBP20.91■□□□□ 0.94
SSH1-208ENST00000548522 ZBTB48P10074 688 aaPredicted RBP20.91■□□□□ 0.94
SSH1-208ENST00000548522 RASA3Q14644 834 aa20.91■□□□□ 0.94
SSH1-208ENST00000548522 ECM29Q5VYK3 1845 aa20.91■□□□□ 0.94
SSH1-208ENST00000548522 LDHAL6AQ6ZMR3 332 aa20.91■□□□□ 0.94
SSH1-208ENST00000548522 CNNM1Q9NRU3 951 aa20.91■□□□□ 0.94
SSH1-208ENST00000548522 TRIM17Q9Y577 477 aa20.91■□□□□ 0.94
SSH1-208ENST00000548522 MYO1BO43795 1136 aa20.9■□□□□ 0.94
SSH1-208ENST00000548522 ALDH1A1P00352 501 aa20.9■□□□□ 0.94
SSH1-208ENST00000548522 RBM5P52756 815 aaKnown RBP eCLIP20.9■□□□□ 0.94
SSH1-208ENST00000548522 FKBP1AP62942 108 aaKnown RBP20.9■□□□□ 0.94
SSH1-208ENST00000548522 CCDC57Q2TAC2 916 aa20.9■□□□□ 0.94
SSH1-208ENST00000548522 NCBP3Q53F19 620 aaKnown RBP20.9■□□□□ 0.94
SSH1-208ENST00000548522 TAF7LQ5H9L4 462 aa20.9■□□□□ 0.94
SSH1-208ENST00000548522 OTOP1Q7RTM1 612 aa20.9■□□□□ 0.94
SSH1-208ENST00000548522 WDR63Q8IWG1 891 aa20.9■□□□□ 0.94
SSH1-208ENST00000548522 USP2O75604 605 aaPredicted RBP20.89■□□□□ 0.93
SSH1-208ENST00000548522 GYG1P46976 350 aa20.89■□□□□ 0.93
SSH1-208ENST00000548522 CAP1Q01518 475 aa20.89■□□□□ 0.93
SSH1-208ENST00000548522 PUS3Q9BZE2 481 aaKnown RBP20.89■□□□□ 0.93
SSH1-208ENST00000548522 OTOFQ9HC10 1997 aa20.88■□□□□ 0.93
SSH1-208ENST00000548522 LAMB1P07942 1786 aa20.88■□□□□ 0.93
SSH1-208ENST00000548522 FAM205AQ6ZU69 1335 aa20.88■□□□□ 0.93
SSH1-208ENST00000548522 CRHR2Q13324 411 aa20.88■□□□□ 0.93
SSH1-208ENST00000548522 SUPT20HL1Q3ZLR7 823 aa20.88■□□□□ 0.93
SSH1-208ENST00000548522 MFSD14BQ5SR56 506 aa20.88■□□□□ 0.93
SSH1-208ENST00000548522 KAZALD1Q96I82 304 aa20.88■□□□□ 0.93
SSH1-208ENST00000548522 PTPN18Q99952 460 aa20.88■□□□□ 0.93
SSH1-208ENST00000548522 INHBEP58166 350 aa20.87■□□□□ 0.93
SSH1-208ENST00000548522 GRIK5Q16478 980 aa20.87■□□□□ 0.93
SSH1-208ENST00000548522 SPDYE2Q495Y8 402 aa20.87■□□□□ 0.93
SSH1-208ENST00000548522 TDRD7Q8NHU6 1098 aaKnown RBP20.87■□□□□ 0.93
SSH1-208ENST00000548522 CD99L2Q8TCZ2 262 aa20.87■□□□□ 0.93
SSH1-208ENST00000548522 CNKSR2Q8WXI2 1034 aa20.87■□□□□ 0.93
SSH1-208ENST00000548522 SUCLG2Q96I99 432 aa20.87■□□□□ 0.93
SSH1-208ENST00000548522 TDRD3Q9H7E2 651 aaKnown RBP20.87■□□□□ 0.93
SSH1-208ENST00000548522 TTF2Q9UNY4 1162 aaKnown RBP20.87■□□□□ 0.93
SSH1-208ENST00000548522 POTEFA5A3E0 1075 aa20.86■□□□□ 0.93
SSH1-208ENST00000548522 IREB2P48200 963 aaKnown RBP20.86■□□□□ 0.93
SSH1-208ENST00000548522 SLC4A10Q6U841 1118 aa20.86■□□□□ 0.93
SSH1-208ENST00000548522 FAM84BQ96KN1 310 aaPredicted RBP20.86■□□□□ 0.93
SSH1-208ENST00000548522 ELP3Q9H9T3 547 aa20.86■□□□□ 0.93
SSH1-208ENST00000548522 C9orf78Q9NZ63 289 aaPredicted RBP20.86■□□□□ 0.93
SSH1-208ENST00000548522 ZNF70Q9UC06 446 aaPredicted RBP20.86■□□□□ 0.93
SSH1-208ENST00000548522 CACNA1FO60840 1977 aa20.85■□□□□ 0.93
SSH1-208ENST00000548522 ANKRD13AQ8IZ07 590 aa20.85■□□□□ 0.93
SSH1-208ENST00000548522 OPTNQ96CV9 577 aa20.85■□□□□ 0.93
SSH1-208ENST00000548522 TEPSINQ96N21 525 aa20.85■□□□□ 0.93
SSH1-208ENST00000548522 IQSEC3Q9UPP2 1182 aaPredicted RBP20.85■□□□□ 0.93
SSH1-208ENST00000548522 ARAP2Q8WZ64 1704 aa20.84■□□□□ 0.93
SSH1-208ENST00000548522 NBPF7P0C2Y1 421 aaPredicted RBP20.84■□□□□ 0.93
SSH1-208ENST00000548522 HIBADHP31937 336 aaKnown RBP20.84■□□□□ 0.93
SSH1-208ENST00000548522 TMEM39BQ9GZU3 492 aa20.84■□□□□ 0.93
SSH1-208ENST00000548522 SERPINA10Q9UK55 444 aa20.84■□□□□ 0.93
SSH1-208ENST00000548522 TCP10L2B9ZVM9 353 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms