RNA–Protein interactions for RNA: ENST00000548220.1

PTPRR-207, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 2

Gene PTPRR, Length 1,374 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-207ENST00000548220 RFX5P48382 616 aaPredicted RBP7.7□□□□□ -1.18
PTPRR-207ENST00000548220 RPS8P62241 208 aaKnown RBP7.7□□□□□ -1.18
PTPRR-207ENST00000548220 PTPN12Q05209 780 aaKnown RBP7.7□□□□□ -1.18
PTPRR-207ENST00000548220 E2F4Q16254 413 aa7.7□□□□□ -1.18
PTPRR-207ENST00000548220 TSR1Q2NL82 804 aaKnown RBP7.7□□□□□ -1.18
PTPRR-207ENST00000548220 BICDL1Q6ZP65 573 aa7.7□□□□□ -1.18
PTPRR-207ENST00000548220 DDX46Q7L014 1031 aaKnown RBP7.7□□□□□ -1.18
PTPRR-207ENST00000548220 KIF1BPQ96EK5 621 aa7.7□□□□□ -1.18
PTPRR-207ENST00000548220 BSDC1Q9NW68 430 aaPredicted RBP7.7□□□□□ -1.18
PTPRR-207ENST00000548220 MROH5Q6ZUA9 1318 aa7.69□□□□□ -1.18
PTPRR-207ENST00000548220 C10orf71Q711Q0 1435 aa7.69□□□□□ -1.18
PTPRR-207ENST00000548220 EYA2O00167 538 aa7.69□□□□□ -1.18
PTPRR-207ENST00000548220 TULP1O00294 542 aaPredicted RBP7.69□□□□□ -1.18
PTPRR-207ENST00000548220 IGSF3O75054 1194 aa7.69□□□□□ -1.18
PTPRR-207ENST00000548220 HCLS1P14317 486 aaPredicted RBP7.69□□□□□ -1.18
PTPRR-207ENST00000548220 ITGA6P23229 1130 aa7.69□□□□□ -1.18
PTPRR-207ENST00000548220 G3BP1Q13283 466 aaKnown RBP eCLIP7.69□□□□□ -1.18
PTPRR-207ENST00000548220 EPHA10Q5JZY3 1008 aa7.69□□□□□ -1.18
PTPRR-207ENST00000548220 MSL1Q68DK7 614 aa7.69□□□□□ -1.18
PTPRR-207ENST00000548220 CNKSR1Q969H4 720 aa7.69□□□□□ -1.18
PTPRR-207ENST00000548220 MASTLQ96GX5 879 aa7.69□□□□□ -1.18
PTPRR-207ENST00000548220 RBM17Q96I25 401 aaKnown RBP7.69□□□□□ -1.18
PTPRR-207ENST00000548220 ANKRD2Q9GZV1 360 aa7.69□□□□□ -1.18
PTPRR-207ENST00000548220 AKAP2Q9Y2D5 859 aa7.69□□□□□ -1.18
PTPRR-207ENST00000548220 RIPOR2Q9Y4F9 1068 aa7.69□□□□□ -1.18
PTPRR-207ENST00000548220 PNMA6EA0A0J9YXQ4 647 aa7.68□□□□□ -1.18
PTPRR-207ENST00000548220 IGHMBP2P38935 993 aaKnown RBP7.68□□□□□ -1.18
PTPRR-207ENST00000548220 PRSS12P56730 875 aa7.68□□□□□ -1.18
PTPRR-207ENST00000548220 IRX6P78412 446 aaPredicted RBP7.68□□□□□ -1.18
PTPRR-207ENST00000548220 NUCB1Q02818 461 aa7.68□□□□□ -1.18
PTPRR-207ENST00000548220 GRAPQ13588 217 aa7.68□□□□□ -1.18
PTPRR-207ENST00000548220 SOGA3Q5TF21 947 aa7.68□□□□□ -1.18
PTPRR-207ENST00000548220 LDHAL6AQ6ZMR3 332 aa7.68□□□□□ -1.18
PTPRR-207ENST00000548220 NUTM1Q86Y26 1132 aa7.68□□□□□ -1.18
PTPRR-207ENST00000548220 ANKRD18AQ8IVF6 992 aa7.68□□□□□ -1.18
PTPRR-207ENST00000548220 SYNE4Q8N205 404 aa7.68□□□□□ -1.18
PTPRR-207ENST00000548220 GRAPLQ8TC17 118 aaPredicted RBP7.68□□□□□ -1.18
PTPRR-207ENST00000548220 RPGRQ92834 1020 aaKnown RBP7.68□□□□□ -1.18
PTPRR-207ENST00000548220 MPHOSPH8Q99549 860 aa7.68□□□□□ -1.18
PTPRR-207ENST00000548220 VPS33BQ9H267 617 aa7.68□□□□□ -1.18
PTPRR-207ENST00000548220 GREM2Q9H772 168 aa7.68□□□□□ -1.18
PTPRR-207ENST00000548220 BRCA1P38398 1863 aaKnown RBP7.67□□□□□ -1.18
PTPRR-207ENST00000548220 ABCC12Q96J65 1359 aa7.67□□□□□ -1.18
PTPRR-207ENST00000548220 SURF6O75683 361 aaKnown RBP7.67□□□□□ -1.18
PTPRR-207ENST00000548220 TAF7LQ5H9L4 462 aa7.67□□□□□ -1.18
PTPRR-207ENST00000548220 SP8Q8IXZ3 490 aa7.67□□□□□ -1.18
PTPRR-207ENST00000548220 LRRCC1Q9C099 1032 aa7.67□□□□□ -1.18
PTPRR-207ENST00000548220 TMX4Q9H1E5 349 aaPredicted RBP7.67□□□□□ -1.18
PTPRR-207ENST00000548220 PODXL2Q9NZ53 605 aa7.67□□□□□ -1.18
PTPRR-207ENST00000548220 LRP5O75197 1615 aa7.67□□□□□ -1.18
PTPRR-207ENST00000548220 LRRC37AA6NMS7 1700 aa7.66□□□□□ -1.18
PTPRR-207ENST00000548220 IGHDP01880 384 aa7.66□□□□□ -1.18
PTPRR-207ENST00000548220 UBE4AQ14139 1066 aa7.66□□□□□ -1.18
PTPRR-207ENST00000548220 FAM161AQ3B820 660 aa7.66□□□□□ -1.18
PTPRR-207ENST00000548220 RTL5Q5HYW3 569 aaPredicted RBP7.66□□□□□ -1.18
PTPRR-207ENST00000548220 TMED8Q6PL24 325 aaPredicted RBP7.66□□□□□ -1.18
PTPRR-207ENST00000548220 C15orf52Q6ZUT6 534 aaKnown RBP7.66□□□□□ -1.18
PTPRR-207ENST00000548220 ATG9AQ7Z3C6 839 aa7.66□□□□□ -1.18
PTPRR-207ENST00000548220 SAMD7Q7Z3H4 446 aa7.66□□□□□ -1.18
PTPRR-207ENST00000548220 CLASRPQ8N2M8 674 aaKnown RBP7.66□□□□□ -1.18
PTPRR-207ENST00000548220 C1orf115Q9H7X2 142 aa7.66□□□□□ -1.18
PTPRR-207ENST00000548220 CEP126Q9P2H0 1117 aa7.66□□□□□ -1.18
PTPRR-207ENST00000548220 ATP6V0A2Q9Y487 856 aa7.66□□□□□ -1.18
PTPRR-207ENST00000548220 TNRC6CQ9HCJ0 1690 aaKnown RBP7.65□□□□□ -1.18
PTPRR-207ENST00000548220 ARFGEF1Q9Y6D6 1849 aa7.65□□□□□ -1.18
PTPRR-207ENST00000548220 FAM177BA6PVY3 158 aa7.65□□□□□ -1.18
PTPRR-207ENST00000548220 PDE8BO95263 885 aa7.65□□□□□ -1.18
PTPRR-207ENST00000548220 TJAP1Q5JTD0 557 aa7.65□□□□□ -1.18
PTPRR-207ENST00000548220 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.65□□□□□ -1.18
PTPRR-207ENST00000548220 CHD1LQ86WJ1 897 aa7.65□□□□□ -1.18
PTPRR-207ENST00000548220 TTLL6Q8N841 843 aa7.65□□□□□ -1.18
PTPRR-207ENST00000548220 ZNF512BQ96KM6 892 aaPredicted RBP7.65□□□□□ -1.18
PTPRR-207ENST00000548220 OSBPL3Q9H4L5 887 aa7.65□□□□□ -1.18
PTPRR-207ENST00000548220 IL21Q9HBE4 155 aa7.65□□□□□ -1.18
PTPRR-207ENST00000548220 CNNM1Q9NRU3 951 aa7.65□□□□□ -1.18
PTPRR-207ENST00000548220 PIM2Q9P1W9 311 aa7.65□□□□□ -1.18
PTPRR-207ENST00000548220 STAP2Q9UGK3 403 aa7.65□□□□□ -1.18
PTPRR-207ENST00000548220 LEMD3Q9Y2U8 911 aa7.65□□□□□ -1.18
PTPRR-207ENST00000548220 CHMP3Q9Y3E7 222 aa7.65□□□□□ -1.18
PTPRR-207ENST00000548220 AOX1Q06278 1338 aa7.65□□□□□ -1.19
PTPRR-207ENST00000548220 TAF1P21675 1872 aa7.64□□□□□ -1.19
PTPRR-207ENST00000548220 KIAA1551Q9HCM1 1747 aa7.64□□□□□ -1.19
PTPRR-207ENST00000548220 SASH1O94885 1247 aa7.64□□□□□ -1.19
PTPRR-207ENST00000548220 KCNA3P22001 575 aa7.64□□□□□ -1.19
PTPRR-207ENST00000548220 OS9Q13438 667 aaPredicted RBP7.64□□□□□ -1.19
PTPRR-207ENST00000548220 C2CD5Q86YS7 1000 aa7.64□□□□□ -1.19
PTPRR-207ENST00000548220 RTKN2Q8IZC4 609 aa7.64□□□□□ -1.19
PTPRR-207ENST00000548220 VGLL2Q8N8G2 317 aa7.64□□□□□ -1.19
PTPRR-207ENST00000548220 RHPN1Q8TCX5 695 aa7.64□□□□□ -1.19
PTPRR-207ENST00000548220 C7orf43Q8WVR3 580 aa7.64□□□□□ -1.19
PTPRR-207ENST00000548220 LPIN2Q92539 896 aa7.64□□□□□ -1.19
PTPRR-207ENST00000548220 JARID2Q92833 1246 aaPredicted RBP7.64□□□□□ -1.19
PTPRR-207ENST00000548220 MINPP1Q9UNW1 487 aa7.64□□□□□ -1.19
PTPRR-207ENST00000548220 A0A1B0GUL6 1792 aa7.64□□□□□ -1.19
PTPRR-207ENST00000548220 XDHP47989 1333 aa7.64□□□□□ -1.19
PTPRR-207ENST00000548220 TTC41PQ6P2S7 1318 aa7.64□□□□□ -1.19
PTPRR-207ENST00000548220 COL11A2P13942 1736 aaPredicted RBP7.64□□□□□ -1.19
PTPRR-207ENST00000548220 SMAPO00193 183 aa7.63□□□□□ -1.19
PTPRR-207ENST00000548220 GFRA3O60609 400 aa7.63□□□□□ -1.19
PTPRR-207ENST00000548220 EIF5BO60841 1220 aaKnown RBP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms