RNA–Protein interactions for RNA: ENST00000548015.1

KRT18-204, Transcript of keratin 18, human

TSL 2

Gene KRT18, Length 928 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KRT18-204	ENST00000548015	SUCLG2	Q96I99	432 aa		13.91	□□□□□ -0.18
KRT18-204	ENST00000548015	DEFB129	Q9H1M3	183 aa		13.91	□□□□□ -0.18
KRT18-204	ENST00000548015	FZD1	Q9UP38	647 aa		13.91	□□□□□ -0.18
KRT18-204	ENST00000548015	JAG2	Q9Y219	1238 aa		13.91	□□□□□ -0.18
KRT18-204	ENST00000548015	PLIN1	O60240	522 aa		13.9	□□□□□ -0.18
KRT18-204	ENST00000548015	TBC1D8	O95759	1140 aa		13.9	□□□□□ -0.18
KRT18-204	ENST00000548015	FKBP1A	P62942	108 aa	Known RBP	13.9	□□□□□ -0.18
KRT18-204	ENST00000548015	MKRN3	Q13064	507 aa	Known RBP	13.9	□□□□□ -0.18
KRT18-204	ENST00000548015	PRKG1	Q13976	671 aa		13.9	□□□□□ -0.18
KRT18-204	ENST00000548015	DLGAP5	Q15398	846 aa		13.9	□□□□□ -0.18
KRT18-204	ENST00000548015	SLC4A10	Q6U841	1118 aa		13.9	□□□□□ -0.18
KRT18-204	ENST00000548015	PRMT6	Q96LA8	375 aa	Predicted RBP	13.9	□□□□□ -0.18
KRT18-204	ENST00000548015	PUS3	Q9BZE2	481 aa	Known RBP	13.9	□□□□□ -0.18
KRT18-204	ENST00000548015	C9orf78	Q9NZ63	289 aa	Predicted RBP	13.9	□□□□□ -0.18
KRT18-204	ENST00000548015	SPDYE2B	A6NHP3	402 aa		13.89	□□□□□ -0.19
KRT18-204	ENST00000548015		F8W031	263 aa	Predicted RBP	13.89	□□□□□ -0.19
KRT18-204	ENST00000548015	NBPF7	P0C2Y1	421 aa	Predicted RBP	13.89	□□□□□ -0.19
KRT18-204	ENST00000548015	SPDYE6	P0CI01	402 aa		13.89	□□□□□ -0.19
KRT18-204	ENST00000548015	NF2	P35240	595 aa		13.89	□□□□□ -0.19
KRT18-204	ENST00000548015	CFAP100	Q494V2	611 aa		13.89	□□□□□ -0.19
KRT18-204	ENST00000548015	ARMC9	Q7Z3E5	817 aa		13.89	□□□□□ -0.19
KRT18-204	ENST00000548015	CTU1	Q7Z7A3	348 aa	Known RBP	13.89	□□□□□ -0.19
KRT18-204	ENST00000548015	SRCIN1	Q9C0H9	1055 aa		13.89	□□□□□ -0.19
KRT18-204	ENST00000548015	R3HDML	Q9H3Y0	253 aa		13.89	□□□□□ -0.19
KRT18-204	ENST00000548015	RIPOR2	Q9Y4F9	1068 aa		13.89	□□□□□ -0.19
KRT18-204	ENST00000548015	TAF7L	Q5H9L4	462 aa		13.88	□□□□□ -0.19
KRT18-204	ENST00000548015	SPRYD7	Q5W111	196 aa		13.88	□□□□□ -0.19
KRT18-204	ENST00000548015	ZNF804A	Q7Z570	1209 aa		13.88	□□□□□ -0.19
KRT18-204	ENST00000548015	MRPL50	Q8N5N7	158 aa	Known RBP	13.88	□□□□□ -0.19
KRT18-204	ENST00000548015	TDRD7	Q8NHU6	1098 aa	Known RBP	13.88	□□□□□ -0.19
KRT18-204	ENST00000548015	ZNF296	Q8WUU4	475 aa	Predicted RBP	13.88	□□□□□ -0.19
KRT18-204	ENST00000548015	FAM84B	Q96KN1	310 aa	Predicted RBP	13.88	□□□□□ -0.19
KRT18-204	ENST00000548015	CNNM1	Q9NRU3	951 aa		13.88	□□□□□ -0.19
KRT18-204	ENST00000548015	ANGEL1	Q9UNK9	670 aa	Known RBP	13.88	□□□□□ -0.19
KRT18-204	ENST00000548015	UTY	O14607	1347 aa		13.88	□□□□□ -0.19
KRT18-204	ENST00000548015	CLRN2	A0PK11	232 aa		13.87	□□□□□ -0.19
KRT18-204	ENST00000548015	GYG1	P46976	350 aa		13.87	□□□□□ -0.19
KRT18-204	ENST00000548015	UBE4A	Q14139	1066 aa		13.87	□□□□□ -0.19
KRT18-204	ENST00000548015	MAP3K11	Q16584	847 aa		13.87	□□□□□ -0.19
KRT18-204	ENST00000548015	FAM205A	Q6ZU69	1335 aa		13.87	□□□□□ -0.19
KRT18-204	ENST00000548015	HIBADH	P31937	336 aa	Known RBP	13.86	□□□□□ -0.19
KRT18-204	ENST00000548015	RABL6	Q3YEC7	729 aa	Predicted RBP	13.86	□□□□□ -0.19
KRT18-204	ENST00000548015	NBPF12	Q5TAG4	269 aa	Predicted RBP	13.86	□□□□□ -0.19
KRT18-204	ENST00000548015	ANKRD44	Q8N8A2	993 aa		13.86	□□□□□ -0.19
KRT18-204	ENST00000548015	CLMN	Q96JQ2	1002 aa		13.86	□□□□□ -0.19
KRT18-204	ENST00000548015	GPR25	O00155	361 aa		13.85	□□□□□ -0.19
KRT18-204	ENST00000548015	RASA3	Q14644	834 aa		13.85	□□□□□ -0.19
KRT18-204	ENST00000548015	GRIK5	Q16478	980 aa		13.85	□□□□□ -0.19
KRT18-204	ENST00000548015	NOM1	Q5C9Z4	860 aa	Known RBP	13.85	□□□□□ -0.19
KRT18-204	ENST00000548015	FBXO33	Q7Z6M2	555 aa		13.85	□□□□□ -0.19
KRT18-204	ENST00000548015	SLC10A4	Q96EP9	437 aa		13.85	□□□□□ -0.19
KRT18-204	ENST00000548015	CFHR5	Q9BXR6	569 aa		13.85	□□□□□ -0.19
KRT18-204	ENST00000548015	BICC1	Q9H694	974 aa	Known RBP	13.85	□□□□□ -0.19
KRT18-204	ENST00000548015	PPP2R3B	Q9Y5P8	575 aa		13.85	□□□□□ -0.19
KRT18-204	ENST00000548015	PAPPA2	Q9BXP8	1791 aa		13.84	□□□□□ -0.19
KRT18-204	ENST00000548015	POLR2A	P24928	1970 aa	Known RBP	13.84	□□□□□ -0.19
KRT18-204	ENST00000548015	USP2	O75604	605 aa	Predicted RBP	13.84	□□□□□ -0.19
KRT18-204	ENST00000548015	SOX10	P56693	466 aa		13.84	□□□□□ -0.19
KRT18-204	ENST00000548015	SREBF2	Q12772	1141 aa		13.84	□□□□□ -0.19
KRT18-204	ENST00000548015	SUPT20HL1	Q3ZLR7	823 aa		13.84	□□□□□ -0.19
KRT18-204	ENST00000548015	LRRC24	Q50LG9	513 aa		13.84	□□□□□ -0.19
KRT18-204	ENST00000548015	MFSD14B	Q5SR56	506 aa		13.84	□□□□□ -0.19
KRT18-204	ENST00000548015	SSH1	Q8WYL5	1049 aa		13.84	□□□□□ -0.19
KRT18-204	ENST00000548015	VEZT	Q9HBM0	779 aa		13.84	□□□□□ -0.19
KRT18-204	ENST00000548015	HPS5	Q9UPZ3	1129 aa		13.84	□□□□□ -0.19
KRT18-204	ENST00000548015	CASP8AP2	Q9UKL3	1982 aa		13.83	□□□□□ -0.19
KRT18-204	ENST00000548015	MYO1B	O43795	1136 aa		13.83	□□□□□ -0.2
KRT18-204	ENST00000548015	PPP1R12B	O60237	982 aa	Predicted RBP	13.83	□□□□□ -0.2
KRT18-204	ENST00000548015	GJA5	P36382	358 aa		13.83	□□□□□ -0.2
KRT18-204	ENST00000548015	SPDYE2	Q495Y8	402 aa		13.83	□□□□□ -0.2
KRT18-204	ENST00000548015	CDAN1	Q8IWY9	1227 aa		13.83	□□□□□ -0.2
KRT18-204	ENST00000548015	VGLL2	Q8N8G2	317 aa		13.83	□□□□□ -0.2
KRT18-204	ENST00000548015	USP44	Q9H0E7	712 aa		13.83	□□□□□ -0.2
KRT18-204	ENST00000548015	ZNF70	Q9UC06	446 aa	Predicted RBP	13.83	□□□□□ -0.2
KRT18-204	ENST00000548015	SERPINA10	Q9UK55	444 aa		13.83	□□□□□ -0.2
KRT18-204	ENST00000548015	TTF2	Q9UNY4	1162 aa	Known RBP	13.83	□□□□□ -0.2
KRT18-204	ENST00000548015	SSC5D	A1L4H1	1573 aa		13.83	□□□□□ -0.2
KRT18-204	ENST00000548015	UNCX	A6NJT0	531 aa		13.82	□□□□□ -0.2
KRT18-204	ENST00000548015	RBM5	P52756	815 aa	Known RBP eCLIP	13.82	□□□□□ -0.2
KRT18-204	ENST00000548015	SLFN5	Q08AF3	891 aa		13.82	□□□□□ -0.2
KRT18-204	ENST00000548015	PKN2	Q16513	984 aa	Known RBP	13.82	□□□□□ -0.2
KRT18-204	ENST00000548015	IFNL1	Q8IU54	200 aa		13.82	□□□□□ -0.2
KRT18-204	ENST00000548015	DZIP1L	Q8IYY4	767 aa	Known RBP	13.82	□□□□□ -0.2
KRT18-204	ENST00000548015	KLHDC4	Q8TBB5	520 aa		13.82	□□□□□ -0.2
KRT18-204	ENST00000548015	WNK4	Q96J92	1243 aa		13.82	□□□□□ -0.2
KRT18-204	ENST00000548015	TEPSIN	Q96N21	525 aa		13.82	□□□□□ -0.2
KRT18-204	ENST00000548015	TDRD3	Q9H7E2	651 aa	Known RBP	13.82	□□□□□ -0.2
KRT18-204	ENST00000548015	MROH5	Q6ZUA9	1318 aa		13.82	□□□□□ -0.2
KRT18-204	ENST00000548015	MANSC4	A6NHS7	340 aa	Predicted RBP	13.81	□□□□□ -0.2
KRT18-204	ENST00000548015		E9PSI1	815 aa		13.81	□□□□□ -0.2
KRT18-204	ENST00000548015	IGF2BP3	O00425	579 aa	Known RBP eCLIP	13.81	□□□□□ -0.2
KRT18-204	ENST00000548015	FKTN	O75072	461 aa		13.81	□□□□□ -0.2
KRT18-204	ENST00000548015	INHBE	P58166	350 aa		13.81	□□□□□ -0.2
KRT18-204	ENST00000548015	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	13.81	□□□□□ -0.2
KRT18-204	ENST00000548015	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	13.81	□□□□□ -0.2
KRT18-204	ENST00000548015	COL1A1	P02452	1464 aa	Predicted RBP	13.8	□□□□□ -0.2
KRT18-204	ENST00000548015	PDE8B	O95263	885 aa		13.8	□□□□□ -0.2
KRT18-204	ENST00000548015	ZBTB48	P10074	688 aa	Predicted RBP	13.8	□□□□□ -0.2
KRT18-204	ENST00000548015	CRK	P46108	304 aa		13.8	□□□□□ -0.2
KRT18-204	ENST00000548015	BCAM	P50895	628 aa		13.8	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 77 ms