RNA–Protein interactions for RNA: ENST00000547926.6

CEP290-204, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,122 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-204ENST00000547926 PKN1Q16512 942 aa5.09□□□□□ -1.59
CEP290-204ENST00000547926 SPACA7Q96KW9 195 aa5.09□□□□□ -1.59
CEP290-204ENST00000547926 CAPN12Q6ZSI9 719 aa5.09□□□□□ -1.59
CEP290-204ENST00000547926 C2CD4AQ8NCU7 369 aaPredicted RBP5.09□□□□□ -1.59
CEP290-204ENST00000547926 GIMAP7Q8NHV1 300 aa5.09□□□□□ -1.59
CEP290-204ENST00000547926 TFIP11Q9UBB9 837 aaKnown RBP5.09□□□□□ -1.59
CEP290-204ENST00000547926 U3KQE9 123 aa5.09□□□□□ -1.59
CEP290-204ENST00000547926 MEGF11A6BM72 1044 aa5.08□□□□□ -1.6
CEP290-204ENST00000547926 RNASE1P07998 156 aaKnown RBP5.08□□□□□ -1.6
CEP290-204ENST00000547926 NUTM2GQ5VZR2 741 aa5.08□□□□□ -1.6
CEP290-204ENST00000547926 MBNL3Q9NUK0 354 aaKnown RBP5.08□□□□□ -1.6
CEP290-204ENST00000547926 JAG2Q9Y219 1238 aa5.08□□□□□ -1.6
CEP290-204ENST00000547926 LOC100289279A0A1B0GTE1 492 aa5.08□□□□□ -1.6
CEP290-204ENST00000547926 A6NJR5 290 aa5.08□□□□□ -1.6
CEP290-204ENST00000547926 DYNC1LI2O43237 492 aaPredicted RBP5.08□□□□□ -1.6
CEP290-204ENST00000547926 PTPRAP18433 802 aa5.08□□□□□ -1.6
CEP290-204ENST00000547926 PIP4K2BP78356 416 aa5.08□□□□□ -1.6
CEP290-204ENST00000547926 ARXQ96QS3 562 aa5.08□□□□□ -1.6
CEP290-204ENST00000547926 METTL22Q9BUU2 404 aaPredicted RBP5.08□□□□□ -1.6
CEP290-204ENST00000547926 FKBP5Q13451 457 aaPredicted RBP5.07□□□□□ -1.6
CEP290-204ENST00000547926 CPSF6Q16630 551 aaKnown RBP eCLIP5.07□□□□□ -1.6
CEP290-204ENST00000547926 PAOXQ6QHF9 649 aa5.07□□□□□ -1.6
CEP290-204ENST00000547926 LMCD1Q9NZU5 365 aa5.07□□□□□ -1.6
CEP290-204ENST00000547926 MAFBQ9Y5Q3 323 aaPredicted RBP5.07□□□□□ -1.6
CEP290-204ENST00000547926 SOX1O00570 391 aaPredicted RBP5.06□□□□□ -1.6
CEP290-204ENST00000547926 NFICP08651 508 aa5.06□□□□□ -1.6
CEP290-204ENST00000547926 CD8BP10966 210 aa5.06□□□□□ -1.6
CEP290-204ENST00000547926 KANK4Q5T7N3 995 aaPredicted RBP5.06□□□□□ -1.6
CEP290-204ENST00000547926 NCAPG2Q86XI2 1143 aa5.06□□□□□ -1.6
CEP290-204ENST00000547926 USP26Q9BXU7 913 aa5.06□□□□□ -1.6
CEP290-204ENST00000547926 SLC5A6Q9Y289 635 aa5.06□□□□□ -1.6
CEP290-204ENST00000547926 SMG8Q8ND04 991 aaKnown RBP5.06□□□□□ -1.6
CEP290-204ENST00000547926 LRRN4CLQ8ND94 238 aa5.06□□□□□ -1.6
CEP290-204ENST00000547926 RC3H2Q9HBD1 1191 aaKnown RBP5.06□□□□□ -1.6
CEP290-204ENST00000547926 TMEM63CQ9P1W3 806 aa5.06□□□□□ -1.6
CEP290-204ENST00000547926 CNTN3Q9P232 1028 aa5.06□□□□□ -1.6
CEP290-204ENST00000547926 ZBTB39O15060 712 aa5.05□□□□□ -1.6
CEP290-204ENST00000547926 USP11P51784 963 aa5.05□□□□□ -1.6
CEP290-204ENST00000547926 ATG4DQ86TL0 474 aaPredicted RBP5.05□□□□□ -1.6
CEP290-204ENST00000547926 ANKMY2Q8IV38 441 aa5.05□□□□□ -1.6
CEP290-204ENST00000547926 EZH1Q92800 747 aaPredicted RBP5.05□□□□□ -1.6
CEP290-204ENST00000547926 SUGCTQ9HAC7 445 aa5.05□□□□□ -1.6
CEP290-204ENST00000547926 FOXO3O43524 673 aa5.05□□□□□ -1.6
CEP290-204ENST00000547926 LGR6Q9HBX8 967 aa5.05□□□□□ -1.6
CEP290-204ENST00000547926 OSGEPQ9NPF4 335 aa5.05□□□□□ -1.6
CEP290-204ENST00000547926 SOX13Q9UN79 622 aa5.05□□□□□ -1.6
CEP290-204ENST00000547926 ZNF503-AS2A6NEH8 195 aa5.04□□□□□ -1.6
CEP290-204ENST00000547926 USP17L15C9J2P7 530 aa5.04□□□□□ -1.6
CEP290-204ENST00000547926 USP17L10C9JJH3 530 aa5.04□□□□□ -1.6
CEP290-204ENST00000547926 USP17L13C9JLJ4 530 aa5.04□□□□□ -1.6
CEP290-204ENST00000547926 USP17L12C9JPN9 530 aa5.04□□□□□ -1.6
CEP290-204ENST00000547926 USP17L11C9JVI0 530 aa5.04□□□□□ -1.6
CEP290-204ENST00000547926 USP17L21D6R901 530 aa5.04□□□□□ -1.6
CEP290-204ENST00000547926 USP17L18D6R9N7 530 aa5.04□□□□□ -1.6
CEP290-204ENST00000547926 USP17L22D6RA61 530 aa5.04□□□□□ -1.6
CEP290-204ENST00000547926 USP17L17D6RBQ6 530 aa5.04□□□□□ -1.6
CEP290-204ENST00000547926 USP17L19D6RCP7 530 aa5.04□□□□□ -1.6
CEP290-204ENST00000547926 USP17L20D6RJB6 530 aa5.04□□□□□ -1.6
CEP290-204ENST00000547926 USP17L24Q0WX57 530 aa5.04□□□□□ -1.6
CEP290-204ENST00000547926 BIN1O00499 593 aa5.03□□□□□ -1.6
CEP290-204ENST00000547926 TNFRSF10BO14763 440 aa5.03□□□□□ -1.6
CEP290-204ENST00000547926 C19orf57Q0VDD7 668 aa5.03□□□□□ -1.6
CEP290-204ENST00000547926 TTC39BQ5VTQ0 682 aaPredicted RBP5.03□□□□□ -1.6
CEP290-204ENST00000547926 VN1R5Q7Z5H4 357 aa5.03□□□□□ -1.6
CEP290-204ENST00000547926 PLD6Q8N2A8 252 aaKnown RBP5.03□□□□□ -1.6
CEP290-204ENST00000547926 FAM181AQ8N9Y4 354 aa5.03□□□□□ -1.6
CEP290-204ENST00000547926 GPR152Q8TDT2 470 aa5.03□□□□□ -1.6
CEP290-204ENST00000547926 TMEM40Q8WWA1 233 aa5.03□□□□□ -1.6
CEP290-204ENST00000547926 VTI1AQ96AJ9 217 aa5.03□□□□□ -1.6
CEP290-204ENST00000547926 SEMA6CQ9H3T2 930 aa5.03□□□□□ -1.6
CEP290-204ENST00000547926 ABI2Q9NYB9 513 aaPredicted RBP5.03□□□□□ -1.6
CEP290-204ENST00000547926 ACTL7BQ9Y614 415 aa5.03□□□□□ -1.6
CEP290-204ENST00000547926 LRRC10BA6NIK2 292 aa5.03□□□□□ -1.6
CEP290-204ENST00000547926 CTSBP07858 339 aa5.03□□□□□ -1.6
CEP290-204ENST00000547926 RAB6AP20340 208 aa5.03□□□□□ -1.6
CEP290-204ENST00000547926 LARP1Q6PKG0 1096 aaKnown RBP5.03□□□□□ -1.6
CEP290-204ENST00000547926 LRRC56Q8IYG6 542 aaPredicted RBP5.03□□□□□ -1.6
CEP290-204ENST00000547926 WNT8BQ93098 351 aa5.03□□□□□ -1.6
CEP290-204ENST00000547926 PRDM7Q9NQW5 492 aa5.03□□□□□ -1.6
CEP290-204ENST00000547926 C1GALT1Q9NS00 363 aa5.03□□□□□ -1.6
CEP290-204ENST00000547926 DZANK1Q9NVP4 752 aa5.03□□□□□ -1.6
CEP290-204ENST00000547926 KRT1P04264 644 aa5.02□□□□□ -1.61
CEP290-204ENST00000547926 ZSCAN22P10073 491 aaPredicted RBP5.02□□□□□ -1.61
CEP290-204ENST00000547926 SOX4Q06945 474 aaPredicted RBP5.02□□□□□ -1.61
CEP290-204ENST00000547926 KRTAP19-4Q3LI73 84 aa5.02□□□□□ -1.61
CEP290-204ENST00000547926 TTLL10Q6ZVT0 673 aa5.02□□□□□ -1.61
CEP290-204ENST00000547926 PRIMPOLQ96LW4 560 aa5.02□□□□□ -1.61
CEP290-204ENST00000547926 SLC38A3Q99624 504 aa5.02□□□□□ -1.61
CEP290-204ENST00000547926 CYP4F12Q9HCS2 524 aa5.02□□□□□ -1.61
CEP290-204ENST00000547926 CRIM1Q9NZV1 1036 aa5.02□□□□□ -1.61
CEP290-204ENST00000547926 FUT4P22083 530 aa5.02□□□□□ -1.61
CEP290-204ENST00000547926 FLIIQ13045 1269 aa5.02□□□□□ -1.61
CEP290-204ENST00000547926 FAM105AQ9NUU6 356 aa5.02□□□□□ -1.61
CEP290-204ENST00000547926 SALL4Q9UJQ4 1053 aa5.02□□□□□ -1.61
CEP290-204ENST00000547926 CABP4P57796 275 aa5.01□□□□□ -1.61
CEP290-204ENST00000547926 MLANAQ16655 118 aa5.01□□□□□ -1.61
CEP290-204ENST00000547926 DUSP27Q5VZP5 1158 aa5.01□□□□□ -1.61
CEP290-204ENST00000547926 LIN37Q96GY3 246 aaPredicted RBP5.01□□□□□ -1.61
CEP290-204ENST00000547926 FAM84AQ96KN4 292 aa5.01□□□□□ -1.61
CEP290-204ENST00000547926 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms