RNA–Protein interactions for RNA: ENST00000547637.1

SMARCD1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-204ENST00000547637 DEFB129Q9H1M3 183 aa29.2■■■□□ 2.26
SMARCD1-204ENST00000547637 ANGEL1Q9UNK9 670 aaKnown RBP29.2■■■□□ 2.26
SMARCD1-204ENST00000547637 COL1A1P02452 1464 aaPredicted RBP29.2■■■□□ 2.26
SMARCD1-204ENST00000547637 PPP1R12BO60237 982 aaPredicted RBP29.19■■■□□ 2.26
SMARCD1-204ENST00000547637 SUPT20HL1Q3ZLR7 823 aa29.19■■■□□ 2.26
SMARCD1-204ENST00000547637 SLC4A10Q6U841 1118 aa29.19■■■□□ 2.26
SMARCD1-204ENST00000547637 SRCIN1Q9C0H9 1055 aa29.19■■■□□ 2.26
SMARCD1-204ENST00000547637 ZNF316A6NFI3 1004 aaPredicted RBP29.18■■■□□ 2.26
SMARCD1-204ENST00000547637 TBC1D8O95759 1140 aa29.18■■■□□ 2.26
SMARCD1-204ENST00000547637 PTPN12Q05209 780 aaKnown RBP29.18■■■□□ 2.26
SMARCD1-204ENST00000547637 SLC10A4Q96EP9 437 aa29.18■■■□□ 2.26
SMARCD1-204ENST00000547637 ZNF646O15015 1829 aaPredicted RBP29.17■■■□□ 2.26
SMARCD1-204ENST00000547637 F8W031 263 aaPredicted RBP29.17■■■□□ 2.26
SMARCD1-204ENST00000547637 SNAP23O00161 211 aa29.17■■■□□ 2.26
SMARCD1-204ENST00000547637 ALDH1A1P00352 501 aa29.17■■■□□ 2.26
SMARCD1-204ENST00000547637 RBM5P52756 815 aaKnown RBP eCLIP29.17■■■□□ 2.26
SMARCD1-204ENST00000547637 INHBEP58166 350 aa29.17■■■□□ 2.26
SMARCD1-204ENST00000547637 MKRN3Q13064 507 aaKnown RBP29.17■■■□□ 2.26
SMARCD1-204ENST00000547637 FAM9BQ8IZU0 186 aa29.17■■■□□ 2.26
SMARCD1-204ENST00000547637 CFAP100Q494V2 611 aa29.16■■■□□ 2.26
SMARCD1-204ENST00000547637 NOM1Q5C9Z4 860 aaKnown RBP29.16■■■□□ 2.26
SMARCD1-204ENST00000547637 UNCXA6NJT0 531 aa29.15■■■□□ 2.26
SMARCD1-204ENST00000547637 LDLRAD1Q5T700 205 aa29.15■■■□□ 2.26
SMARCD1-204ENST00000547637 CERS5Q8N5B7 392 aa29.15■■■□□ 2.26
SMARCD1-204ENST00000547637 ZNF296Q8WUU4 475 aaPredicted RBP29.15■■■□□ 2.26
SMARCD1-204ENST00000547637 IRS2Q9Y4H2 1338 aa29.15■■■□□ 2.26
SMARCD1-204ENST00000547637 UBE4AQ14139 1066 aa29.14■■■□□ 2.26
SMARCD1-204ENST00000547637 ZNF594Q96JF6 807 aaPredicted RBP29.14■■■□□ 2.26
SMARCD1-204ENST00000547637 MANSC4A6NHS7 340 aaPredicted RBP29.13■■■□□ 2.25
SMARCD1-204ENST00000547637 GPR25O00155 361 aa29.13■■■□□ 2.25
SMARCD1-204ENST00000547637 SPRYD7Q5W111 196 aa29.13■■■□□ 2.25
SMARCD1-204ENST00000547637 VEZTQ9HBM0 779 aa29.13■■■□□ 2.25
SMARCD1-204ENST00000547637 SPINK5Q9NQ38 1064 aaPredicted RBP29.13■■■□□ 2.25
SMARCD1-204ENST00000547637 SPDYE2BA6NHP3 402 aa29.12■■■□□ 2.25
SMARCD1-204ENST00000547637 SPDYE6P0CI01 402 aa29.12■■■□□ 2.25
SMARCD1-204ENST00000547637 TNFAIP1Q13829 316 aa29.12■■■□□ 2.25
SMARCD1-204ENST00000547637 MAP3K11Q16584 847 aa29.12■■■□□ 2.25
SMARCD1-204ENST00000547637 EPHA10Q5JZY3 1008 aa29.12■■■□□ 2.25
SMARCD1-204ENST00000547637 IREB2P48200 963 aaKnown RBP29.11■■■□□ 2.25
SMARCD1-204ENST00000547637 FKTNO75072 461 aa29.1■■■□□ 2.25
SMARCD1-204ENST00000547637 ZBTB48P10074 688 aaPredicted RBP29.1■■■□□ 2.25
SMARCD1-204ENST00000547637 HIBADHP31937 336 aaKnown RBP29.1■■■□□ 2.25
SMARCD1-204ENST00000547637 SOX10P56693 466 aa29.1■■■□□ 2.25
SMARCD1-204ENST00000547637 PRMT6Q96LA8 375 aaPredicted RBP29.1■■■□□ 2.25
SMARCD1-204ENST00000547637 CFHR5Q9BXR6 569 aa29.1■■■□□ 2.25
SMARCD1-204ENST00000547637 CLRN2A0PK11 232 aa29.09■■■□□ 2.25
SMARCD1-204ENST00000547637 OTUD7BQ6GQQ9 843 aa29.09■■■□□ 2.25
SMARCD1-204ENST00000547637 VPS37DQ86XT2 251 aa29.09■■■□□ 2.25
SMARCD1-204ENST00000547637 ZBTB4Q9P1Z0 1013 aaPredicted RBP29.09■■■□□ 2.25
SMARCD1-204ENST00000547637 HPS5Q9UPZ3 1129 aa29.09■■■□□ 2.25
SMARCD1-204ENST00000547637 JAG2Q9Y219 1238 aa29.09■■■□□ 2.25
SMARCD1-204ENST00000547637 MFSD14BQ5SR56 506 aa29.08■■■□□ 2.25
SMARCD1-204ENST00000547637 FAM205AQ6ZU69 1335 aa29.08■■■□□ 2.25
SMARCD1-204ENST00000547637 MROH5Q6ZUA9 1318 aa29.08■■■□□ 2.25
SMARCD1-204ENST00000547637 ECM29Q5VYK3 1845 aa29.08■■■□□ 2.25
SMARCD1-204ENST00000547637 TDRD7Q8NHU6 1098 aaKnown RBP29.07■■■□□ 2.24
SMARCD1-204ENST00000547637 SERPINA10Q9UK55 444 aa29.07■■■□□ 2.24
SMARCD1-204ENST00000547637 TTF2Q9UNY4 1162 aaKnown RBP29.06■■■□□ 2.24
SMARCD1-204ENST00000547637 RASA3Q14644 834 aa29.05■■■□□ 2.24
SMARCD1-204ENST00000547637 CAVIN4Q5BKX8 364 aa29.05■■■□□ 2.24
SMARCD1-204ENST00000547637 FBXO46Q6PJ61 603 aaPredicted RBP29.05■■■□□ 2.24
SMARCD1-204ENST00000547637 ANKRD13AQ8IZ07 590 aa29.05■■■□□ 2.24
SMARCD1-204ENST00000547637 SUCLG2Q96I99 432 aa29.05■■■□□ 2.24
SMARCD1-204ENST00000547637 A0A1B0GUL6 1792 aa29.05■■■□□ 2.24
SMARCD1-204ENST00000547637 FRAT2O75474 233 aaPredicted RBP29.04■■■□□ 2.24
SMARCD1-204ENST00000547637 GYG1P46976 350 aa29.04■■■□□ 2.24
SMARCD1-204ENST00000547637 IFNL1Q8IU54 200 aa29.04■■■□□ 2.24
SMARCD1-204ENST00000547637 WNK4Q96J92 1243 aa29.04■■■□□ 2.24
SMARCD1-204ENST00000547637 FZD1Q9UP38 647 aa29.04■■■□□ 2.24
SMARCD1-204ENST00000547637 PCDHAC2Q9Y5I4 1007 aa29.04■■■□□ 2.24
SMARCD1-204ENST00000547637 TNNI2P48788 182 aa29.03■■■□□ 2.24
SMARCD1-204ENST00000547637 NBPF12Q5TAG4 269 aaPredicted RBP29.03■■■□□ 2.24
SMARCD1-204ENST00000547637 FAM84BQ96KN1 310 aaPredicted RBP29.03■■■□□ 2.24
SMARCD1-204ENST00000547637 NBPF7P0C2Y1 421 aaPredicted RBP29.02■■■□□ 2.24
SMARCD1-204ENST00000547637 ZNF70Q9UC06 446 aaPredicted RBP29.02■■■□□ 2.24
SMARCD1-204ENST00000547637 UTYO14607 1347 aa29.01■■■□□ 2.23
SMARCD1-204ENST00000547637 PTPRCP08575 1304 aa29.01■■■□□ 2.23
SMARCD1-204ENST00000547637 TBC1D22AQ8WUA7 517 aa29.01■■■□□ 2.23
SMARCD1-204ENST00000547637 CLMNQ96JQ2 1002 aa29.01■■■□□ 2.23
SMARCD1-204ENST00000547637 PUS3Q9BZE2 481 aaKnown RBP29.01■■■□□ 2.23
SMARCD1-204ENST00000547637 RIPOR2Q9Y4F9 1068 aa29.01■■■□□ 2.23
SMARCD1-204ENST00000547637 USP2O75604 605 aaPredicted RBP29■■■□□ 2.23
SMARCD1-204ENST00000547637 SPDYE2Q495Y8 402 aa29■■■□□ 2.23
SMARCD1-204ENST00000547637 METTL24Q5JXM2 366 aa29■■■□□ 2.23
SMARCD1-204ENST00000547637 PDE4DIPQ5VU43 2346 aa28.99■■■□□ 2.23
SMARCD1-204ENST00000547637 DZIP1LQ8IYY4 767 aaKnown RBP28.99■■■□□ 2.23
SMARCD1-204ENST00000547637 BICC1Q9H694 974 aaKnown RBP28.99■■■□□ 2.23
SMARCD1-204ENST00000547637 TDRD3Q9H7E2 651 aaKnown RBP28.99■■■□□ 2.23
SMARCD1-204ENST00000547637 SLC34A2O95436 690 aa28.98■■■□□ 2.23
SMARCD1-204ENST00000547637 RABL6Q3YEC7 729 aaPredicted RBP28.98■■■□□ 2.23
SMARCD1-204ENST00000547637 KAZALD1Q96I82 304 aa28.98■■■□□ 2.23
SMARCD1-204ENST00000547637 MRPL50Q8N5N7 158 aaKnown RBP28.97■■■□□ 2.23
SMARCD1-204ENST00000547637 E9PSI1 815 aa28.96■■■□□ 2.23
SMARCD1-204ENST00000547637 CRKP46108 304 aa28.96■■■□□ 2.23
SMARCD1-204ENST00000547637 HDLBPQ00341 1268 aaKnown RBP28.96■■■□□ 2.23
SMARCD1-204ENST00000547637 FBXO33Q7Z6M2 555 aa28.96■■■□□ 2.23
SMARCD1-204ENST00000547637 ERO1AQ96HE7 468 aa28.96■■■□□ 2.23
SMARCD1-204ENST00000547637 PDE8BO95263 885 aa28.95■■■□□ 2.22
SMARCD1-204ENST00000547637 CHAF1AQ13111 956 aaPredicted RBP28.95■■■□□ 2.22
SMARCD1-204ENST00000547637 R3HDMLQ9H3Y0 253 aa28.95■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms