RNA–Protein interactions for RNA: ENST00000546512.5

LINC00661-201, long intergenic non-protein coding RNA 661, humanhuman

TSL 4

Gene LINC00661, Length 544 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-201ENST00000546512 IFIT1P09914 478 aaKnown RBP16.21■□□□□ 0.19
LINC00661-201ENST00000546512 VEGFBP49765 207 aa16.21■□□□□ 0.19
LINC00661-201ENST00000546512 FKBP1AP62942 108 aaKnown RBP16.21■□□□□ 0.19
LINC00661-201ENST00000546512 NBPF9Q3BBW0 867 aa16.21■□□□□ 0.19
LINC00661-201ENST00000546512 DZIP1LQ8IYY4 767 aaKnown RBP16.21■□□□□ 0.19
LINC00661-201ENST00000546512 PA2G4Q9UQ80 394 aaKnown RBP16.21■□□□□ 0.19
LINC00661-201ENST00000546512 TLL2Q9Y6L7 1015 aa16.21■□□□□ 0.19
LINC00661-201ENST00000546512 FAM205AQ6ZU69 1335 aa16.2■□□□□ 0.18
LINC00661-201ENST00000546512 F8W031 263 aaPredicted RBP16.2■□□□□ 0.18
LINC00661-201ENST00000546512 WNT10BO00744 389 aa16.2■□□□□ 0.18
LINC00661-201ENST00000546512 SRGAP3O43295 1099 aa16.2■□□□□ 0.18
LINC00661-201ENST00000546512 FGFR2P21802 821 aa16.2■□□□□ 0.18
LINC00661-201ENST00000546512 MTX1Q13505 466 aa16.2■□□□□ 0.18
LINC00661-201ENST00000546512 PAXIP1Q6ZW49 1069 aaPredicted RBP16.2■□□□□ 0.18
LINC00661-201ENST00000546512 FBXO33Q7Z6M2 555 aa16.2■□□□□ 0.18
LINC00661-201ENST00000546512 COPRSQ9NQ92 184 aa16.2■□□□□ 0.18
LINC00661-201ENST00000546512 IQSEC3Q9UPP2 1182 aaPredicted RBP16.2■□□□□ 0.18
LINC00661-201ENST00000546512 PITPNM2Q9BZ72 1349 aa16.19■□□□□ 0.18
LINC00661-201ENST00000546512 FRAT2O75474 233 aaPredicted RBP16.19■□□□□ 0.18
LINC00661-201ENST00000546512 SLC5A1P13866 664 aa16.19■□□□□ 0.18
LINC00661-201ENST00000546512 IL15P40933 162 aaPredicted RBP16.19■□□□□ 0.18
LINC00661-201ENST00000546512 BCAMP50895 628 aa16.19■□□□□ 0.18
LINC00661-201ENST00000546512 SAPCD2Q86UD0 394 aa16.19■□□□□ 0.18
LINC00661-201ENST00000546512 ITPRIPQ8IWB1 547 aa16.19■□□□□ 0.18
LINC00661-201ENST00000546512 LPIN2Q92539 896 aa16.19■□□□□ 0.18
LINC00661-201ENST00000546512 CEP126Q9P2H0 1117 aa16.19■□□□□ 0.18
LINC00661-201ENST00000546512 POLR2AP24928 1970 aaKnown RBP16.18■□□□□ 0.18
LINC00661-201ENST00000546512 RLBP1P12271 317 aa16.18■□□□□ 0.18
LINC00661-201ENST00000546512 MFSD14BQ5SR56 506 aa16.18■□□□□ 0.18
LINC00661-201ENST00000546512 CDCA5Q96FF9 252 aa16.18■□□□□ 0.18
LINC00661-201ENST00000546512 SCAF8Q9UPN6 1271 aaKnown RBP16.18■□□□□ 0.18
LINC00661-201ENST00000546512 PCNTO95613 3336 aa16.17■□□□□ 0.18
LINC00661-201ENST00000546512 CHAF1AQ13111 956 aaPredicted RBP16.17■□□□□ 0.18
LINC00661-201ENST00000546512 GRM1Q13255 1194 aa16.17■□□□□ 0.18
LINC00661-201ENST00000546512 DLGAP5Q15398 846 aa16.17■□□□□ 0.18
LINC00661-201ENST00000546512 ATP2B3Q16720 1220 aa16.17■□□□□ 0.18
LINC00661-201ENST00000546512 CAPNS2Q96L46 248 aa16.17■□□□□ 0.18
LINC00661-201ENST00000546512 WDR33Q9C0J8 1336 aaKnown RBP16.17■□□□□ 0.18
LINC00661-201ENST00000546512 PNMA6EA0A0J9YXQ4 647 aa16.16■□□□□ 0.18
LINC00661-201ENST00000546512 HSPA1AP0DMV8 641 aaKnown RBP16.16■□□□□ 0.18
LINC00661-201ENST00000546512 HSPA1BP0DMV9 641 aaKnown RBP16.16■□□□□ 0.18
LINC00661-201ENST00000546512 ECE1P42892 770 aa16.16■□□□□ 0.18
LINC00661-201ENST00000546512 CFAP100Q494V2 611 aa16.16■□□□□ 0.18
LINC00661-201ENST00000546512 CYP4F22Q6NT55 531 aa16.16■□□□□ 0.18
LINC00661-201ENST00000546512 C2orf69Q8N8R5 385 aa16.16■□□□□ 0.18
LINC00661-201ENST00000546512 ZBED3Q96IU2 234 aaPredicted RBP16.16■□□□□ 0.18
LINC00661-201ENST00000546512 GBA2Q9HCG7 927 aaPredicted RBP16.16■□□□□ 0.18
LINC00661-201ENST00000546512 RBM5P52756 815 aaKnown RBP eCLIP16.15■□□□□ 0.18
LINC00661-201ENST00000546512 HUNKP57058 714 aa16.15■□□□□ 0.18
LINC00661-201ENST00000546512 APOBEC3FQ8IUX4 373 aaKnown RBP16.15■□□□□ 0.18
LINC00661-201ENST00000546512 MTMR14Q8NCE2 650 aa16.15■□□□□ 0.18
LINC00661-201ENST00000546512 TBC1D22AQ8WUA7 517 aa16.15■□□□□ 0.18
LINC00661-201ENST00000546512 HHIPL1Q96JK4 782 aa16.15■□□□□ 0.18
LINC00661-201ENST00000546512 TTF2Q9UNY4 1162 aaKnown RBP16.15■□□□□ 0.18
LINC00661-201ENST00000546512 PCDHAC2Q9Y5I4 1007 aa16.15■□□□□ 0.18
LINC00661-201ENST00000546512 ARAP2Q8WZ64 1704 aa16.14■□□□□ 0.17
LINC00661-201ENST00000546512 ZBTB7BO15156 539 aaPredicted RBP16.14■□□□□ 0.17
LINC00661-201ENST00000546512 PANK1Q8TE04 598 aa16.14■□□□□ 0.17
LINC00661-201ENST00000546512 C1orf115Q9H7X2 142 aa16.14■□□□□ 0.17
LINC00661-201ENST00000546512 RCAN3Q9UKA8 241 aa16.14■□□□□ 0.17
LINC00661-201ENST00000546512 SPDYE2BA6NHP3 402 aa16.13■□□□□ 0.17
LINC00661-201ENST00000546512 MYO1BO43795 1136 aa16.13■□□□□ 0.17
LINC00661-201ENST00000546512 SPDYE6P0CI01 402 aa16.13■□□□□ 0.17
LINC00661-201ENST00000546512 MS4A1P11836 297 aa16.13■□□□□ 0.17
LINC00661-201ENST00000546512 TFCP2Q12800 502 aa16.13■□□□□ 0.17
LINC00661-201ENST00000546512 GRIK5Q16478 980 aa16.13■□□□□ 0.17
LINC00661-201ENST00000546512 PRAMEF18Q5VWM3 479 aa16.13■□□□□ 0.17
LINC00661-201ENST00000546512 G3BP1Q13283 466 aaKnown RBP eCLIP16.12■□□□□ 0.17
LINC00661-201ENST00000546512 PRMT6Q96LA8 375 aaPredicted RBP16.12■□□□□ 0.17
LINC00661-201ENST00000546512 SERPINA10Q9UK55 444 aa16.12■□□□□ 0.17
LINC00661-201ENST00000546512 CLRN2A0PK11 232 aa16.11■□□□□ 0.17
LINC00661-201ENST00000546512 ADORA1P30542 326 aa16.11■□□□□ 0.17
LINC00661-201ENST00000546512 PHKA1P46020 1223 aa16.11■□□□□ 0.17
LINC00661-201ENST00000546512 TIMM10P62072 90 aa16.11■□□□□ 0.17
LINC00661-201ENST00000546512 ATP8B2P98198 1209 aa16.11■□□□□ 0.17
LINC00661-201ENST00000546512 POLA2Q14181 598 aa16.11■□□□□ 0.17
LINC00661-201ENST00000546512 GNL3LQ9NVN8 582 aaKnown RBP16.11■□□□□ 0.17
LINC00661-201ENST00000546512 AKAP2Q9Y2D5 859 aa16.11■□□□□ 0.17
LINC00661-201ENST00000546512 THSD7BQ9C0I4 1608 aa16.11■□□□□ 0.17
LINC00661-201ENST00000546512 COL1A1P02452 1464 aaPredicted RBP16.1■□□□□ 0.17
LINC00661-201ENST00000546512 A0A1B0GUL7 405 aa16.1■□□□□ 0.17
LINC00661-201ENST00000546512 AOC2O75106 756 aa16.1■□□□□ 0.17
LINC00661-201ENST00000546512 NF2P35240 595 aa16.1■□□□□ 0.17
LINC00661-201ENST00000546512 CRKP46108 304 aa16.1■□□□□ 0.17
LINC00661-201ENST00000546512 FKBP1BP68106 108 aa16.1■□□□□ 0.17
LINC00661-201ENST00000546512 MAP2K1Q02750 393 aaPredicted RBP16.1■□□□□ 0.17
LINC00661-201ENST00000546512 CCDC102BQ68D86 513 aa16.1■□□□□ 0.17
LINC00661-201ENST00000546512 RGMBQ6NW40 437 aa16.1■□□□□ 0.17
LINC00661-201ENST00000546512 WDR66Q8TBY9 1149 aa16.1■□□□□ 0.17
LINC00661-201ENST00000546512 SSH3Q8TE77 659 aa16.1■□□□□ 0.17
LINC00661-201ENST00000546512 AIDAQ96BJ3 306 aa16.1■□□□□ 0.17
LINC00661-201ENST00000546512 VEZTQ9HBM0 779 aa16.1■□□□□ 0.17
LINC00661-201ENST00000546512 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.1■□□□□ 0.17
LINC00661-201ENST00000546512 AOX1Q06278 1338 aa16.1■□□□□ 0.17
LINC00661-201ENST00000546512 PAPPA2Q9BXP8 1791 aa16.1■□□□□ 0.17
LINC00661-201ENST00000546512 ECM29Q5VYK3 1845 aa16.1■□□□□ 0.17
LINC00661-201ENST00000546512 MYH13Q9UKX3 1938 aa16.09■□□□□ 0.17
LINC00661-201ENST00000546512 MAP2K2P36507 400 aa16.09■□□□□ 0.17
LINC00661-201ENST00000546512 DEFB129Q9H1M3 183 aa16.09■□□□□ 0.17
LINC00661-201ENST00000546512 TDRD3Q9H7E2 651 aaKnown RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms