RNA–Protein interactions for RNA: ENST00000546433.5

SSH1-203, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 5,621 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-203ENST00000546433 GCOM1H8Y6P7 765 aaPredicted RBP11.92□□□□□ -0.5
SSH1-203ENST00000546433 MYZAPP0CAP1 466 aa11.92□□□□□ -0.5
SSH1-203ENST00000546433 ATP8B2P98198 1209 aa11.92□□□□□ -0.5
SSH1-203ENST00000546433 KCNG4Q8TDN1 519 aa11.92□□□□□ -0.5
SSH1-203ENST00000546433 TAOK3Q9H2K8 898 aa11.92□□□□□ -0.5
SSH1-203ENST00000546433 CFAP65Q6ZU64 1925 aaKnown RBP11.92□□□□□ -0.5
SSH1-203ENST00000546433 TSPY2A6NKD2 308 aa11.92□□□□□ -0.5
SSH1-203ENST00000546433 ZNF165P49910 485 aa11.92□□□□□ -0.5
SSH1-203ENST00000546433 UBA5Q9GZZ9 404 aa11.92□□□□□ -0.5
SSH1-203ENST00000546433 SH2D4AQ9H788 454 aa11.92□□□□□ -0.5
SSH1-203ENST00000546433 ADCY5O95622 1261 aa11.92□□□□□ -0.5
SSH1-203ENST00000546433 IQGAP3Q86VI3 1631 aa11.91□□□□□ -0.5
SSH1-203ENST00000546433 PREX1Q8TCU6 1659 aa11.91□□□□□ -0.5
SSH1-203ENST00000546433 NBPF7P0C2Y1 421 aaPredicted RBP11.91□□□□□ -0.5
SSH1-203ENST00000546433 SDSP20132 328 aa11.91□□□□□ -0.5
SSH1-203ENST00000546433 UBA7P41226 1012 aa11.91□□□□□ -0.5
SSH1-203ENST00000546433 TDRD12Q587J7 1177 aaKnown RBP11.91□□□□□ -0.5
SSH1-203ENST00000546433 TMC6Q7Z403 805 aa11.91□□□□□ -0.5
SSH1-203ENST00000546433 VTI1AQ96AJ9 217 aa11.91□□□□□ -0.5
SSH1-203ENST00000546433 TMX3Q96JJ7 454 aa11.91□□□□□ -0.5
SSH1-203ENST00000546433 POLKQ9UBT6 870 aa11.91□□□□□ -0.5
SSH1-203ENST00000546433 TTC41PQ6P2S7 1318 aa11.91□□□□□ -0.5
SSH1-203ENST00000546433 RBM25P49756 843 aaKnown RBP11.91□□□□□ -0.5
SSH1-203ENST00000546433 PDE1AP54750 535 aa11.91□□□□□ -0.5
SSH1-203ENST00000546433 TXNRD1Q16881 649 aa11.91□□□□□ -0.5
SSH1-203ENST00000546433 LRSAM1Q6UWE0 723 aa11.91□□□□□ -0.5
SSH1-203ENST00000546433 ESYT1Q9BSJ8 1104 aa11.91□□□□□ -0.5
SSH1-203ENST00000546433 SH3TC1Q8TE82 1336 aa11.91□□□□□ -0.5
SSH1-203ENST00000546433 PHKG2P15735 406 aa11.91□□□□□ -0.5
SSH1-203ENST00000546433 TTLL6Q8N841 843 aa11.91□□□□□ -0.5
SSH1-203ENST00000546433 CTAGE1Q96RT6 745 aa11.91□□□□□ -0.5
SSH1-203ENST00000546433 PAXBP1Q9Y5B6 917 aa11.91□□□□□ -0.5
SSH1-203ENST00000546433 CCDC171Q6TFL3 1326 aa11.91□□□□□ -0.5
SSH1-203ENST00000546433 PRKCSHP14314 528 aaPredicted RBP11.91□□□□□ -0.5
SSH1-203ENST00000546433 USP6P35125 1406 aa11.91□□□□□ -0.5
SSH1-203ENST00000546433 IL15P40933 162 aaPredicted RBP11.91□□□□□ -0.5
SSH1-203ENST00000546433 FAM107BQ9H098 131 aa11.91□□□□□ -0.5
SSH1-203ENST00000546433 INSRP06213 1382 aa11.9□□□□□ -0.5
SSH1-203ENST00000546433 GNAQP50148 359 aa11.9□□□□□ -0.5
SSH1-203ENST00000546433 WTAPQ15007 396 aa11.9□□□□□ -0.5
SSH1-203ENST00000546433 MTHFSDQ2M296 383 aaKnown RBP11.9□□□□□ -0.5
SSH1-203ENST00000546433 CCDC40Q4G0X9 1142 aa11.9□□□□□ -0.5
SSH1-203ENST00000546433 ZNF790Q6PG37 636 aa11.9□□□□□ -0.5
SSH1-203ENST00000546433 CCDC82Q8N4S0 544 aa11.9□□□□□ -0.5
SSH1-203ENST00000546433 MYO3AQ8NEV4 1616 aa11.9□□□□□ -0.5
SSH1-203ENST00000546433 IFI16Q16666 785 aaKnown RBP11.9□□□□□ -0.5
SSH1-203ENST00000546433 KSR2Q6VAB6 950 aa11.9□□□□□ -0.5
SSH1-203ENST00000546433 ARMC9Q7Z3E5 817 aa11.9□□□□□ -0.5
SSH1-203ENST00000546433 SLC26A6Q9BXS9 759 aa11.9□□□□□ -0.5
SSH1-203ENST00000546433 CSADQ9Y600 493 aa11.9□□□□□ -0.5
SSH1-203ENST00000546433 PABPC4Q13310 644 aaKnown RBP eCLIP11.9□□□□□ -0.5
SSH1-203ENST00000546433 CERS3Q8IU89 383 aa11.9□□□□□ -0.5
SSH1-203ENST00000546433 DYDC1Q8WWB3 177 aa11.9□□□□□ -0.5
SSH1-203ENST00000546433 PRIMPOLQ96LW4 560 aa11.9□□□□□ -0.5
SSH1-203ENST00000546433 SLC5A4Q9NY91 659 aa11.9□□□□□ -0.5
SSH1-203ENST00000546433 AATKQ6ZMQ8 1374 aa11.9□□□□□ -0.5
SSH1-203ENST00000546433 CCDC172P0C7W6 258 aa11.9□□□□□ -0.5
SSH1-203ENST00000546433 MCMDC2Q4G0Z9 681 aa11.9□□□□□ -0.5
SSH1-203ENST00000546433 MICALCLQ6ZW33 695 aa11.9□□□□□ -0.5
SSH1-203ENST00000546433 COPS6Q7L5N1 327 aa11.9□□□□□ -0.5
SSH1-203ENST00000546433 MICU3Q86XE3 530 aa11.9□□□□□ -0.5
SSH1-203ENST00000546433 TFIP11Q9UBB9 837 aaKnown RBP11.9□□□□□ -0.5
SSH1-203ENST00000546433 CDC42BPBQ9Y5S2 1711 aa11.9□□□□□ -0.5
SSH1-203ENST00000546433 ATP5J2-PTCD1G3V325 749 aa11.9□□□□□ -0.51
SSH1-203ENST00000546433 TUBB4AP04350 444 aa11.9□□□□□ -0.51
SSH1-203ENST00000546433 SPAG1Q07617 926 aa11.9□□□□□ -0.51
SSH1-203ENST00000546433 SNW1Q13573 536 aaKnown RBP11.9□□□□□ -0.51
SSH1-203ENST00000546433 GTPBP4Q9BZE4 634 aaKnown RBP11.9□□□□□ -0.51
SSH1-203ENST00000546433 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.9□□□□□ -0.51
SSH1-203ENST00000546433 PALLDQ8WX93 1383 aa11.89□□□□□ -0.51
SSH1-203ENST00000546433 BCORL1Q5H9F3 1711 aa11.89□□□□□ -0.51
SSH1-203ENST00000546433 GRM8O00222 908 aa11.89□□□□□ -0.51
SSH1-203ENST00000546433 ZSCAN23Q3MJ62 389 aa11.89□□□□□ -0.51
SSH1-203ENST00000546433 ERMNQ8TAM6 284 aa11.89□□□□□ -0.51
SSH1-203ENST00000546433 ESR2Q92731 530 aa11.89□□□□□ -0.51
SSH1-203ENST00000546433 RBM27Q9P2N5 1060 aaKnown RBP11.89□□□□□ -0.51
SSH1-203ENST00000546433 IFFO1Q0D2I5 559 aa11.89□□□□□ -0.51
SSH1-203ENST00000546433 CHPF2Q9P2E5 772 aa11.89□□□□□ -0.51
SSH1-203ENST00000546433 CEP152O94986 1710 aa11.89□□□□□ -0.51
SSH1-203ENST00000546433 ZBTB43O43298 467 aa11.89□□□□□ -0.51
SSH1-203ENST00000546433 MAP2K1Q02750 393 aaPredicted RBP11.89□□□□□ -0.51
SSH1-203ENST00000546433 SCLT1Q96NL6 688 aa11.89□□□□□ -0.51
SSH1-203ENST00000546433 MEIS3Q99687 375 aa11.89□□□□□ -0.51
SSH1-203ENST00000546433 KLF18A0A0U1RQI7 1052 aa11.89□□□□□ -0.51
SSH1-203ENST00000546433 SYKP43405 635 aa11.89□□□□□ -0.51
SSH1-203ENST00000546433 FAM182BQ5T319 152 aa11.88□□□□□ -0.51
SSH1-203ENST00000546433 TULP4Q9NRJ4 1543 aa11.88□□□□□ -0.51
SSH1-203ENST00000546433 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.88□□□□□ -0.51
SSH1-203ENST00000546433 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.88□□□□□ -0.51
SSH1-203ENST00000546433 SMC1AQ14683 1233 aaKnown RBP11.88□□□□□ -0.51
SSH1-203ENST00000546433 ATP2B3Q16720 1220 aa11.88□□□□□ -0.51
SSH1-203ENST00000546433 EXOC1Q9NV70 894 aa11.88□□□□□ -0.51
SSH1-203ENST00000546433 RBM8AQ9Y5S9 174 aaKnown RBP11.88□□□□□ -0.51
SSH1-203ENST00000546433 SPATA31A1Q5TZJ5 1347 aa11.88□□□□□ -0.51
SSH1-203ENST00000546433 RAD50Q92878 1312 aa11.88□□□□□ -0.51
SSH1-203ENST00000546433 SERPINB2P05120 415 aa11.88□□□□□ -0.51
SSH1-203ENST00000546433 GNAT2P19087 354 aa11.88□□□□□ -0.51
SSH1-203ENST00000546433 DCAF15Q66K64 600 aa11.88□□□□□ -0.51
SSH1-203ENST00000546433 BRF1Q92994 677 aa11.88□□□□□ -0.51
SSH1-203ENST00000546433 SNRKQ9NRH2 765 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms