RNA–Protein interactions for RNA: ENST00000546279.5

LMO3-233, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-233ENST00000546279 USP50Q70EL3 339 aaPredicted RBP13.21□□□□□ -0.29
LMO3-233ENST00000546279 ANKRD2Q9GZV1 360 aa13.21□□□□□ -0.29
LMO3-233ENST00000546279 RTN4Q9NQC3 1192 aaKnown RBP13.21□□□□□ -0.29
LMO3-233ENST00000546279 EXOC6BQ9Y2D4 811 aa13.21□□□□□ -0.29
LMO3-233ENST00000546279 LEMD3Q9Y2U8 911 aa13.21□□□□□ -0.29
LMO3-233ENST00000546279 ZNF804BA4D1E1 1349 aa13.2□□□□□ -0.3
LMO3-233ENST00000546279 ATP2B4P23634 1241 aa13.2□□□□□ -0.3
LMO3-233ENST00000546279 TAF7LQ5H9L4 462 aa13.2□□□□□ -0.3
LMO3-233ENST00000546279 HHIPL1Q96JK4 782 aa13.2□□□□□ -0.3
LMO3-233ENST00000546279 TSKSQ9UJT2 592 aa13.2□□□□□ -0.3
LMO3-233ENST00000546279 GGA1Q9UJY5 639 aa13.2□□□□□ -0.3
LMO3-233ENST00000546279 COL1A1P02452 1464 aaPredicted RBP13.19□□□□□ -0.3
LMO3-233ENST00000546279 SURF6O75683 361 aaKnown RBP13.19□□□□□ -0.3
LMO3-233ENST00000546279 UFL1O94874 794 aa13.19□□□□□ -0.3
LMO3-233ENST00000546279 UBE4AQ14139 1066 aa13.19□□□□□ -0.3
LMO3-233ENST00000546279 METTL24Q5JXM2 366 aa13.19□□□□□ -0.3
LMO3-233ENST00000546279 CST9Q5W186 159 aa13.19□□□□□ -0.3
LMO3-233ENST00000546279 SMC5Q8IY18 1101 aa13.19□□□□□ -0.3
LMO3-233ENST00000546279 VPS33BQ9H267 617 aa13.19□□□□□ -0.3
LMO3-233ENST00000546279 GPR108Q9NPR9 543 aa13.19□□□□□ -0.3
LMO3-233ENST00000546279 GJA3Q9Y6H8 435 aa13.19□□□□□ -0.3
LMO3-233ENST00000546279 DOCK2Q92608 1830 aa13.18□□□□□ -0.3
LMO3-233ENST00000546279 YDJCA8MPS7 323 aa13.18□□□□□ -0.3
LMO3-233ENST00000546279 AOC2O75106 756 aa13.18□□□□□ -0.3
LMO3-233ENST00000546279 HMMRO75330 724 aa13.18□□□□□ -0.3
LMO3-233ENST00000546279 AOC3Q16853 763 aa13.18□□□□□ -0.3
LMO3-233ENST00000546279 FAM84BQ96KN1 310 aaPredicted RBP13.18□□□□□ -0.3
LMO3-233ENST00000546279 ANKIB1Q9P2G1 1089 aa13.18□□□□□ -0.3
LMO3-233ENST00000546279 ADORA1P30542 326 aa13.17□□□□□ -0.3
LMO3-233ENST00000546279 G3BP1Q13283 466 aaKnown RBP eCLIP13.17□□□□□ -0.3
LMO3-233ENST00000546279 PRPF38BQ5VTL8 546 aaKnown RBP13.17□□□□□ -0.3
LMO3-233ENST00000546279 FBXO33Q7Z6M2 555 aa13.17□□□□□ -0.3
LMO3-233ENST00000546279 SAPCD2Q86UD0 394 aa13.17□□□□□ -0.3
LMO3-233ENST00000546279 RHPN1Q8TCX5 695 aa13.17□□□□□ -0.3
LMO3-233ENST00000546279 EAF2Q96CJ1 260 aaPredicted RBP13.17□□□□□ -0.3
LMO3-233ENST00000546279 CEP126Q9P2H0 1117 aa13.17□□□□□ -0.3
LMO3-233ENST00000546279 SALL3Q9BXA9 1300 aa13.16□□□□□ -0.3
LMO3-233ENST00000546279 C6orf229H3BNL8 230 aa13.16□□□□□ -0.3
LMO3-233ENST00000546279 EPS15P42566 896 aa13.16□□□□□ -0.3
LMO3-233ENST00000546279 PUM3Q15397 648 aaKnown RBP13.16□□□□□ -0.3
LMO3-233ENST00000546279 ATP2B3Q16720 1220 aa13.16□□□□□ -0.3
LMO3-233ENST00000546279 WASHC4Q2M389 1173 aa13.16□□□□□ -0.3
LMO3-233ENST00000546279 TNNI3KQ59H18 835 aa13.16□□□□□ -0.3
LMO3-233ENST00000546279 SUPT20HQ8NEM7 779 aa13.16□□□□□ -0.3
LMO3-233ENST00000546279 LPIN2Q92539 896 aa13.16□□□□□ -0.3
LMO3-233ENST00000546279 KCNQ5Q9NR82 932 aa13.16□□□□□ -0.3
LMO3-233ENST00000546279 TLR7Q9NYK1 1049 aaKnown RBP13.16□□□□□ -0.3
LMO3-233ENST00000546279 FPGT-TNNI3KV9GXZ4 949 aa13.16□□□□□ -0.3
LMO3-233ENST00000546279 A0A1B0GUL7 405 aa13.15□□□□□ -0.3
LMO3-233ENST00000546279 TRAF5O00463 557 aa13.15□□□□□ -0.3
LMO3-233ENST00000546279 RIMBP2O15034 1052 aa13.15□□□□□ -0.3
LMO3-233ENST00000546279 PPIP5K2O43314 1243 aa13.15□□□□□ -0.3
LMO3-233ENST00000546279 RAB11FIP3O75154 756 aa13.15□□□□□ -0.3
LMO3-233ENST00000546279 CELF2O95319 508 aaKnown RBP13.15□□□□□ -0.3
LMO3-233ENST00000546279 IL1R1P14778 569 aa13.15□□□□□ -0.3
LMO3-233ENST00000546279 SCNN1DP51172 638 aa13.15□□□□□ -0.3
LMO3-233ENST00000546279 TIMM10P62072 90 aa13.15□□□□□ -0.3
LMO3-233ENST00000546279 NOGQ13253 232 aa13.15□□□□□ -0.3
LMO3-233ENST00000546279 ADARB2Q9NS39 739 aaKnown RBP13.15□□□□□ -0.3
LMO3-233ENST00000546279 DBNLQ9UJU6 430 aaKnown RBP13.15□□□□□ -0.3
LMO3-233ENST00000546279 TRPM7Q96QT4 1865 aa13.14□□□□□ -0.31
LMO3-233ENST00000546279 MYH7P12883 1935 aa13.14□□□□□ -0.31
LMO3-233ENST00000546279 GYG1P46976 350 aa13.14□□□□□ -0.31
LMO3-233ENST00000546279 FMR1Q06787 632 aaKnown RBP eCLIP13.14□□□□□ -0.31
LMO3-233ENST00000546279 LARGE2Q8N3Y3 721 aa13.14□□□□□ -0.31
LMO3-233ENST00000546279 TDRD7Q8NHU6 1098 aaKnown RBP13.14□□□□□ -0.31
LMO3-233ENST00000546279 KIF1BPQ96EK5 621 aa13.14□□□□□ -0.31
LMO3-233ENST00000546279 XAGE2Q96GT9 111 aa13.14□□□□□ -0.31
LMO3-233ENST00000546279 EYA3Q99504 573 aa13.14□□□□□ -0.31
LMO3-233ENST00000546279 DBNDD2Q9BQY9 259 aa13.14□□□□□ -0.31
LMO3-233ENST00000546279 DBNDD1Q9H9R9 158 aa13.14□□□□□ -0.31
LMO3-233ENST00000546279 CASP8AP2Q9UKL3 1982 aa13.13□□□□□ -0.31
LMO3-233ENST00000546279 SMARCA5O60264 1052 aaPredicted RBP13.13□□□□□ -0.31
LMO3-233ENST00000546279 ECE2O60344 883 aa13.13□□□□□ -0.31
LMO3-233ENST00000546279 PHKA1P46020 1223 aa13.13□□□□□ -0.31
LMO3-233ENST00000546279 BCAMP50895 628 aa13.13□□□□□ -0.31
LMO3-233ENST00000546279 DOK7Q18PE1 504 aa13.13□□□□□ -0.31
LMO3-233ENST00000546279 HSP90AB4PQ58FF6 505 aa13.13□□□□□ -0.31
LMO3-233ENST00000546279 CIAPIN1Q6FI81 312 aa13.13□□□□□ -0.31
LMO3-233ENST00000546279 IFNLR1Q8IU57 520 aaPredicted RBP13.13□□□□□ -0.31
LMO3-233ENST00000546279 ERC1Q8IUD2 1116 aa13.13□□□□□ -0.31
LMO3-233ENST00000546279 REM2Q8IYK8 340 aaPredicted RBP13.13□□□□□ -0.31
LMO3-233ENST00000546279 ZC3H12CQ9C0D7 883 aaKnown RBP13.13□□□□□ -0.31
LMO3-233ENST00000546279 CD209Q9NNX6 404 aa13.13□□□□□ -0.31
LMO3-233ENST00000546279 IL1RAPL2Q9NP60 686 aa13.13□□□□□ -0.31
LMO3-233ENST00000546279 ECM29Q5VYK3 1845 aa13.12□□□□□ -0.31
LMO3-233ENST00000546279 CXCL9Q07325 125 aa13.12□□□□□ -0.31
LMO3-233ENST00000546279 ERICH6BQ5W0A0 696 aa13.12□□□□□ -0.31
LMO3-233ENST00000546279 NIM1KQ8IY84 436 aa13.12□□□□□ -0.31
LMO3-233ENST00000546279 ZC3H15Q8WU90 426 aaKnown RBP13.12□□□□□ -0.31
LMO3-233ENST00000546279 GCC1Q96CN9 775 aa13.12□□□□□ -0.31
LMO3-233ENST00000546279 LRRCC1Q9C099 1032 aa13.12□□□□□ -0.31
LMO3-233ENST00000546279 COA1Q9GZY4 146 aa13.12□□□□□ -0.31
LMO3-233ENST00000546279 TMX4Q9H1E5 349 aaPredicted RBP13.12□□□□□ -0.31
LMO3-233ENST00000546279 ZNRF3Q9ULT6 936 aa13.12□□□□□ -0.31
LMO3-233ENST00000546279 AKAP2Q9Y2D5 859 aa13.12□□□□□ -0.31
LMO3-233ENST00000546279 TNRC18O15417 2968 aaPredicted RBP13.12□□□□□ -0.31
LMO3-233ENST00000546279 FAM205AQ6ZU69 1335 aa13.12□□□□□ -0.31
LMO3-233ENST00000546279 SLC5A1P13866 664 aa13.11□□□□□ -0.31
LMO3-233ENST00000546279 ARID4AP29374 1257 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms