RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 KSR2Q6VAB6 950 aa7.65□□□□□ -1.18
SNHG1-225ENST00000545920 LINS1Q8NG48 757 aa7.65□□□□□ -1.18
SNHG1-225ENST00000545920 KIAA1524Q8TCG1 905 aa7.65□□□□□ -1.18
SNHG1-225ENST00000545920 ZNF516Q92618 1163 aa7.65□□□□□ -1.18
SNHG1-225ENST00000545920 MAP4K1Q92918 833 aa7.65□□□□□ -1.18
SNHG1-225ENST00000545920 LLPHQ9BRT6 129 aaKnown RBP7.65□□□□□ -1.18
SNHG1-225ENST00000545920 ZSCAN16Q9H4T2 348 aaPredicted RBP7.65□□□□□ -1.18
SNHG1-225ENST00000545920 HEG1Q9ULI3 1381 aa7.65□□□□□ -1.18
SNHG1-225ENST00000545920 USTQ9Y2C2 406 aa7.65□□□□□ -1.18
SNHG1-225ENST00000545920 CHD2O14647 1828 aaKnown RBP7.64□□□□□ -1.19
SNHG1-225ENST00000545920 ABCC6O95255 1503 aa7.64□□□□□ -1.19
SNHG1-225ENST00000545920 MRC1P22897 1456 aa7.64□□□□□ -1.19
SNHG1-225ENST00000545920 GADD45BO75293 160 aaPredicted RBP7.64□□□□□ -1.19
SNHG1-225ENST00000545920 TUBB4AP04350 444 aa7.64□□□□□ -1.19
SNHG1-225ENST00000545920 HMGB1P09429 215 aaKnown RBP7.64□□□□□ -1.19
SNHG1-225ENST00000545920 CASTP20810 708 aaKnown RBP7.64□□□□□ -1.19
SNHG1-225ENST00000545920 GJB2P29033 226 aa7.64□□□□□ -1.19
SNHG1-225ENST00000545920 LTKP29376 864 aa7.64□□□□□ -1.19
SNHG1-225ENST00000545920 TEFQ10587 303 aa7.64□□□□□ -1.19
SNHG1-225ENST00000545920 OS9Q13438 667 aaPredicted RBP7.64□□□□□ -1.19
SNHG1-225ENST00000545920 GRIPAP1Q4V328 841 aa7.64□□□□□ -1.19
SNHG1-225ENST00000545920 DNTTIP2Q5QJE6 756 aaKnown RBP7.64□□□□□ -1.19
SNHG1-225ENST00000545920 UNC5CLQ8IV45 518 aa7.64□□□□□ -1.19
SNHG1-225ENST00000545920 RNF214Q8ND24 703 aa7.64□□□□□ -1.19
SNHG1-225ENST00000545920 LRRN4Q8WUT4 740 aa7.64□□□□□ -1.19
SNHG1-225ENST00000545920 PKNOX2Q96KN3 472 aa7.64□□□□□ -1.19
SNHG1-225ENST00000545920 PPP1R12CQ9BZL4 782 aa7.64□□□□□ -1.19
SNHG1-225ENST00000545920 NUP62CLQ9H1M0 184 aa7.64□□□□□ -1.19
SNHG1-225ENST00000545920 FAM13BQ9NYF5 915 aa7.64□□□□□ -1.19
SNHG1-225ENST00000545920 MIS18AQ9NYP9 233 aa7.64□□□□□ -1.19
SNHG1-225ENST00000545920 CNPY2Q9Y2B0 182 aa7.64□□□□□ -1.19
SNHG1-225ENST00000545920 GOLGA6L4A6NEF3 574 aa7.63□□□□□ -1.19
SNHG1-225ENST00000545920 PATL2C9JE40 543 aaKnown RBP7.63□□□□□ -1.19
SNHG1-225ENST00000545920 KIF2AO00139 706 aaPredicted RBP7.63□□□□□ -1.19
SNHG1-225ENST00000545920 SOX11P35716 441 aa7.63□□□□□ -1.19
SNHG1-225ENST00000545920 GGCXP38435 758 aa7.63□□□□□ -1.19
SNHG1-225ENST00000545920 FAM193AP78312 1265 aa7.63□□□□□ -1.19
SNHG1-225ENST00000545920 G3BP1Q13283 466 aaKnown RBP eCLIP7.63□□□□□ -1.19
SNHG1-225ENST00000545920 USPL1Q5W0Q7 1092 aa7.63□□□□□ -1.19
SNHG1-225ENST00000545920 CREB3L3Q68CJ9 461 aa7.63□□□□□ -1.19
SNHG1-225ENST00000545920 CYB5RLQ6IPT4 315 aa7.63□□□□□ -1.19
SNHG1-225ENST00000545920 BLOC1S2Q6QNY1 142 aa7.63□□□□□ -1.19
SNHG1-225ENST00000545920 TDRD7Q8NHU6 1098 aaKnown RBP7.63□□□□□ -1.19
SNHG1-225ENST00000545920 JAKMIP1Q96N16 626 aaKnown RBP7.63□□□□□ -1.19
SNHG1-225ENST00000545920 FEZ1Q99689 392 aa7.63□□□□□ -1.19
SNHG1-225ENST00000545920 GTPBP4Q9BZE4 634 aaKnown RBP7.63□□□□□ -1.19
SNHG1-225ENST00000545920 IL1RAPL2Q9NP60 686 aa7.63□□□□□ -1.19
SNHG1-225ENST00000545920 C9orf78Q9NZ63 289 aaPredicted RBP7.63□□□□□ -1.19
SNHG1-225ENST00000545920 CFAP45Q9UL16 551 aa7.63□□□□□ -1.19
SNHG1-225ENST00000545920 PAXBP1Q9Y5B6 917 aa7.63□□□□□ -1.19
SNHG1-225ENST00000545920 KDM3BQ7LBC6 1761 aa7.63□□□□□ -1.19
SNHG1-225ENST00000545920 MST1RQ04912 1400 aa7.62□□□□□ -1.19
SNHG1-225ENST00000545920 TSPOAP1O95153 1857 aa7.62□□□□□ -1.19
SNHG1-225ENST00000545920 ADCY9O60503 1353 aa7.62□□□□□ -1.19
SNHG1-225ENST00000545920 MED23Q9ULK4 1368 aa7.62□□□□□ -1.19
SNHG1-225ENST00000545920 PI4KAP2A4QPH2 592 aa7.62□□□□□ -1.19
SNHG1-225ENST00000545920 CTIFO43310 598 aaKnown RBP7.62□□□□□ -1.19
SNHG1-225ENST00000545920 HCLS1P14317 486 aaPredicted RBP7.62□□□□□ -1.19
SNHG1-225ENST00000545920 RPS6KB1P23443 525 aa7.62□□□□□ -1.19
SNHG1-225ENST00000545920 APLP1P51693 650 aa7.62□□□□□ -1.19
SNHG1-225ENST00000545920 MLECQ14165 292 aa7.62□□□□□ -1.19
SNHG1-225ENST00000545920 TSHZ3Q63HK5 1081 aa7.62□□□□□ -1.19
SNHG1-225ENST00000545920 LARP1BQ659C4 914 aaKnown RBP7.62□□□□□ -1.19
SNHG1-225ENST00000545920 LARP1Q6PKG0 1096 aaKnown RBP7.62□□□□□ -1.19
SNHG1-225ENST00000545920 SARM1Q6SZW1 724 aa7.62□□□□□ -1.19
SNHG1-225ENST00000545920 CWC27Q6UX04 472 aaKnown RBP7.62□□□□□ -1.19
SNHG1-225ENST00000545920 CREBRFQ8IUR6 639 aa7.62□□□□□ -1.19
SNHG1-225ENST00000545920 PI4KAP1Q8N8J0 262 aa7.62□□□□□ -1.19
SNHG1-225ENST00000545920 CLSTN2Q9H4D0 955 aa7.62□□□□□ -1.19
SNHG1-225ENST00000545920 DDX21Q9NR30 783 aaKnown RBP eCLIP7.62□□□□□ -1.19
SNHG1-225ENST00000545920 KCND1Q9NSA2 647 aa7.62□□□□□ -1.19
SNHG1-225ENST00000545920 RBM8AQ9Y5S9 174 aaKnown RBP7.62□□□□□ -1.19
SNHG1-225ENST00000545920 LMO7Q8WWI1 1683 aa7.62□□□□□ -1.19
SNHG1-225ENST00000545920 NFAT5O94916 1531 aa7.62□□□□□ -1.19
SNHG1-225ENST00000545920 BTBD11A6QL63 1104 aa7.61□□□□□ -1.19
SNHG1-225ENST00000545920 GRM8O00222 908 aa7.61□□□□□ -1.19
SNHG1-225ENST00000545920 SLC27A2O14975 620 aa7.61□□□□□ -1.19
SNHG1-225ENST00000545920 FIBPO43427 364 aa7.61□□□□□ -1.19
SNHG1-225ENST00000545920 NBPF7P0C2Y1 421 aaPredicted RBP7.61□□□□□ -1.19
SNHG1-225ENST00000545920 ATP6V1AP38606 617 aa7.61□□□□□ -1.19
SNHG1-225ENST00000545920 KCNJ4P48050 445 aa7.61□□□□□ -1.19
SNHG1-225ENST00000545920 TYRO3Q06418 890 aa7.61□□□□□ -1.19
SNHG1-225ENST00000545920 VAC14Q08AM6 782 aa7.61□□□□□ -1.19
SNHG1-225ENST00000545920 NEXNQ0ZGT2 675 aa7.61□□□□□ -1.19
SNHG1-225ENST00000545920 FUT2Q10981 343 aa7.61□□□□□ -1.19
SNHG1-225ENST00000545920 C1orf141Q5JVX7 400 aa7.61□□□□□ -1.19
SNHG1-225ENST00000545920 FOXD4L5Q5VV16 416 aaPredicted RBP7.61□□□□□ -1.19
SNHG1-225ENST00000545920 NAA16Q6N069 864 aaPredicted RBP7.61□□□□□ -1.19
SNHG1-225ENST00000545920 PRPF40BQ6NWY9 871 aaKnown RBP7.61□□□□□ -1.19
SNHG1-225ENST00000545920 CCDC83Q8IWF9 413 aa7.61□□□□□ -1.19
SNHG1-225ENST00000545920 SLF2Q8IX21 1173 aa7.61□□□□□ -1.19
SNHG1-225ENST00000545920 ABTB2Q8N961 1025 aa7.61□□□□□ -1.19
SNHG1-225ENST00000545920 NKX2-3Q8TAU0 364 aa7.61□□□□□ -1.19
SNHG1-225ENST00000545920 FOXD4L4Q8WXT5 416 aaPredicted RBP7.61□□□□□ -1.19
SNHG1-225ENST00000545920 TNMDQ9H2S6 317 aa7.61□□□□□ -1.19
SNHG1-225ENST00000545920 CHPF2Q9P2E5 772 aa7.61□□□□□ -1.19
SNHG1-225ENST00000545920 TMEM94Q12767 1356 aa7.6□□□□□ -1.19
SNHG1-225ENST00000545920 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.6□□□□□ -1.19
SNHG1-225ENST00000545920 PALM3A6NDB9 673 aaPredicted RBP7.6□□□□□ -1.19
SNHG1-225ENST00000545920 SMTNL1A8MU46 457 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms