RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 UBE4AQ14139 1066 aa26.59■■□□□ 1.85
SCARB1-210ENST00000545493 COL1A1P02452 1464 aaPredicted RBP26.58■■□□□ 1.85
SCARB1-210ENST00000545493 CT47B1P0C2W7 299 aaPredicted RBP26.58■■□□□ 1.85
SCARB1-210ENST00000545493 ZNF157P51786 506 aaPredicted RBP26.58■■□□□ 1.85
SCARB1-210ENST00000545493 LRRC24Q50LG9 513 aa26.58■■□□□ 1.85
SCARB1-210ENST00000545493 PRAMEF18Q5VWM3 479 aa26.58■■□□□ 1.85
SCARB1-210ENST00000545493 MROH5Q6ZUA9 1318 aa26.58■■□□□ 1.85
SCARB1-210ENST00000545493 FKBP1AP62942 108 aaKnown RBP26.57■■□□□ 1.84
SCARB1-210ENST00000545493 FKBP1BP68106 108 aa26.57■■□□□ 1.84
SCARB1-210ENST00000545493 MOB2Q70IA6 237 aa26.57■■□□□ 1.84
SCARB1-210ENST00000545493 RASAL3Q86YV0 1011 aa26.57■■□□□ 1.84
SCARB1-210ENST00000545493 KLHDC4Q8TBB5 520 aa26.57■■□□□ 1.84
SCARB1-210ENST00000545493 PCDHAC2Q9Y5I4 1007 aa26.57■■□□□ 1.84
SCARB1-210ENST00000545493 GYG1P46976 350 aa26.56■■□□□ 1.84
SCARB1-210ENST00000545493 VGLL2Q8N8G2 317 aa26.56■■□□□ 1.84
SCARB1-210ENST00000545493 F8W031 263 aaPredicted RBP26.55■■□□□ 1.84
SCARB1-210ENST00000545493 CA12O43570 354 aa26.55■■□□□ 1.84
SCARB1-210ENST00000545493 APOBEC3FQ8IUX4 373 aaKnown RBP26.55■■□□□ 1.84
SCARB1-210ENST00000545493 MTMR14Q8NCE2 650 aa26.55■■□□□ 1.84
SCARB1-210ENST00000545493 CCDC102AQ96A19 550 aa26.55■■□□□ 1.84
SCARB1-210ENST00000545493 FAM205AQ6ZU69 1335 aa26.55■■□□□ 1.84
SCARB1-210ENST00000545493 SSC5DA1L4H1 1573 aa26.54■■□□□ 1.84
SCARB1-210ENST00000545493 TDRD7Q8NHU6 1098 aaKnown RBP26.54■■□□□ 1.84
SCARB1-210ENST00000545493 FAM84BQ96KN1 310 aaPredicted RBP26.54■■□□□ 1.84
SCARB1-210ENST00000545493 NOB1Q9ULX3 412 aaKnown RBP26.54■■□□□ 1.84
SCARB1-210ENST00000545493 AOX1Q06278 1338 aa26.54■■□□□ 1.84
SCARB1-210ENST00000545493 KIF23Q02241 960 aaPredicted RBP26.53■■□□□ 1.84
SCARB1-210ENST00000545493 METTL24Q5JXM2 366 aa26.53■■□□□ 1.84
SCARB1-210ENST00000545493 HIBADHP31937 336 aaKnown RBP26.52■■□□□ 1.84
SCARB1-210ENST00000545493 RFX5P48382 616 aaPredicted RBP26.52■■□□□ 1.84
SCARB1-210ENST00000545493 DLGAP5Q15398 846 aa26.52■■□□□ 1.84
SCARB1-210ENST00000545493 CFAP100Q494V2 611 aa26.52■■□□□ 1.84
SCARB1-210ENST00000545493 SPDYE2BA6NHP3 402 aa26.51■■□□□ 1.83
SCARB1-210ENST00000545493 SPDYE6P0CI01 402 aa26.51■■□□□ 1.83
SCARB1-210ENST00000545493 AKAP11Q9UKA4 1901 aa26.51■■□□□ 1.83
SCARB1-210ENST00000545493 RARSP54136 660 aaKnown RBP26.5■■□□□ 1.83
SCARB1-210ENST00000545493 MFSD14BQ5SR56 506 aa26.5■■□□□ 1.83
SCARB1-210ENST00000545493 CASP8AP2Q9UKL3 1982 aa26.49■■□□□ 1.83
SCARB1-210ENST00000545493 UBE2Q2LH0YL09 131 aa26.49■■□□□ 1.83
SCARB1-210ENST00000545493 PDE8BO95263 885 aa26.49■■□□□ 1.83
SCARB1-210ENST00000545493 API5Q9BZZ5 524 aaKnown RBP26.49■■□□□ 1.83
SCARB1-210ENST00000545493 MYH13Q9UKX3 1938 aa26.49■■□□□ 1.83
SCARB1-210ENST00000545493 FBXO33Q7Z6M2 555 aa26.48■■□□□ 1.83
SCARB1-210ENST00000545493 CLRN2A0PK11 232 aa26.47■■□□□ 1.83
SCARB1-210ENST00000545493 NF2P35240 595 aa26.47■■□□□ 1.83
SCARB1-210ENST00000545493 PTPN12Q05209 780 aaKnown RBP26.47■■□□□ 1.83
SCARB1-210ENST00000545493 TTLL12Q14166 644 aaPredicted RBP26.47■■□□□ 1.83
SCARB1-210ENST00000545493 PRMT6Q96LA8 375 aaPredicted RBP26.47■■□□□ 1.83
SCARB1-210ENST00000545493 DEFB129Q9H1M3 183 aa26.47■■□□□ 1.83
SCARB1-210ENST00000545493 SAGE1Q9NXZ1 904 aa26.47■■□□□ 1.83
SCARB1-210ENST00000545493 IQSEC3Q9UPP2 1182 aaPredicted RBP26.47■■□□□ 1.83
SCARB1-210ENST00000545493 KIF16BQ96L93 1317 aa26.46■■□□□ 1.83
SCARB1-210ENST00000545493 UBTFL1P0CB47 393 aaPredicted RBP26.46■■□□□ 1.83
SCARB1-210ENST00000545493 FGFR2P21802 821 aa26.46■■□□□ 1.83
SCARB1-210ENST00000545493 CSRNP1Q96S65 589 aa26.46■■□□□ 1.83
SCARB1-210ENST00000545493 EYA2O00167 538 aa26.45■■□□□ 1.82
SCARB1-210ENST00000545493 PUM3Q15397 648 aaKnown RBP26.45■■□□□ 1.82
SCARB1-210ENST00000545493 GRIK5Q16478 980 aa26.45■■□□□ 1.82
SCARB1-210ENST00000545493 TTF2Q9UNY4 1162 aaKnown RBP26.45■■□□□ 1.82
SCARB1-210ENST00000545493 FZD1Q9UP38 647 aa26.45■■□□□ 1.82
SCARB1-210ENST00000545493 OTOFQ9HC10 1997 aa26.45■■□□□ 1.82
SCARB1-210ENST00000545493 LAMB1P07942 1786 aa26.44■■□□□ 1.82
SCARB1-210ENST00000545493 PRKG1Q13976 671 aa26.44■■□□□ 1.82
SCARB1-210ENST00000545493 ATG9AQ7Z3C6 839 aa26.44■■□□□ 1.82
SCARB1-210ENST00000545493 VPS37DQ86XT2 251 aa26.44■■□□□ 1.82
SCARB1-210ENST00000545493 MEIS3Q99687 375 aa26.44■■□□□ 1.82
SCARB1-210ENST00000545493 VEZTQ9HBM0 779 aa26.44■■□□□ 1.82
SCARB1-210ENST00000545493 RNF186Q9NXI6 227 aa26.44■■□□□ 1.82
SCARB1-210ENST00000545493 PPP2R3BQ9Y5P8 575 aa26.44■■□□□ 1.82
SCARB1-210ENST00000545493 MYO1BO43795 1136 aa26.43■■□□□ 1.82
SCARB1-210ENST00000545493 CHAF1AQ13111 956 aaPredicted RBP26.43■■□□□ 1.82
SCARB1-210ENST00000545493 ABHD8Q96I13 439 aa26.43■■□□□ 1.82
SCARB1-210ENST00000545493 SERPINA10Q9UK55 444 aa26.43■■□□□ 1.82
SCARB1-210ENST00000545493 LRRFIP2Q9Y608 721 aaKnown RBP26.43■■□□□ 1.82
SCARB1-210ENST00000545493 BCAMP50895 628 aa26.42■■□□□ 1.82
SCARB1-210ENST00000545493 RBM5P52756 815 aaKnown RBP eCLIP26.42■■□□□ 1.82
SCARB1-210ENST00000545493 SPDYE2Q495Y8 402 aa26.42■■□□□ 1.82
SCARB1-210ENST00000545493 CAVIN4Q5BKX8 364 aa26.42■■□□□ 1.82
SCARB1-210ENST00000545493 ARMC9Q7Z3E5 817 aa26.41■■□□□ 1.82
SCARB1-210ENST00000545493 ANGEL1Q9UNK9 670 aaKnown RBP26.41■■□□□ 1.82
SCARB1-210ENST00000545493 TRPA1O75762 1119 aa26.4■■□□□ 1.82
SCARB1-210ENST00000545493 LDLRAD1Q5T700 205 aa26.4■■□□□ 1.82
SCARB1-210ENST00000545493 ARHGAP45Q92619 1136 aa26.4■■□□□ 1.82
SCARB1-210ENST00000545493 SIL1Q9H173 461 aa26.4■■□□□ 1.82
SCARB1-210ENST00000545493 IFIT1P09914 478 aaKnown RBP26.39■■□□□ 1.82
SCARB1-210ENST00000545493 CRKP46108 304 aa26.39■■□□□ 1.82
SCARB1-210ENST00000545493 MKRN3Q13064 507 aaKnown RBP26.39■■□□□ 1.82
SCARB1-210ENST00000545493 INTS3Q68E01 1043 aaKnown RBP26.39■■□□□ 1.82
SCARB1-210ENST00000545493 REM2Q8IYK8 340 aaPredicted RBP26.39■■□□□ 1.82
SCARB1-210ENST00000545493 MIER1Q8N108 512 aa26.39■■□□□ 1.82
SCARB1-210ENST00000545493 TNNQ9UQP3 1299 aa26.39■■□□□ 1.82
SCARB1-210ENST00000545493 CIAO1O76071 339 aa26.38■■□□□ 1.81
SCARB1-210ENST00000545493 MAP3K11Q16584 847 aa26.38■■□□□ 1.81
SCARB1-210ENST00000545493 DZIP1LQ8IYY4 767 aaKnown RBP26.38■■□□□ 1.81
SCARB1-210ENST00000545493 TBC1D22AQ8WUA7 517 aa26.38■■□□□ 1.81
SCARB1-210ENST00000545493 LPIN2Q92539 896 aa26.38■■□□□ 1.81
SCARB1-210ENST00000545493 ZNF70Q9UC06 446 aaPredicted RBP26.38■■□□□ 1.81
SCARB1-210ENST00000545493 PA2G4Q9UQ80 394 aaKnown RBP26.38■■□□□ 1.81
SCARB1-210ENST00000545493 FRAT2O75474 233 aaPredicted RBP26.37■■□□□ 1.81
SCARB1-210ENST00000545493 SLC5A1P13866 664 aa26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms