RNA–Protein interactions for RNA: ENST00000545367.5

NPIPB4-221, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 2

Gene NPIPB4, Length 846 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-221ENST00000545367 CD99L2Q8TCZ2 262 aa11.22□□□□□ -0.61
NPIPB4-221ENST00000545367 ARAP2Q8WZ64 1704 aa11.22□□□□□ -0.61
NPIPB4-221ENST00000545367 FBXW7Q969H0 707 aa11.22□□□□□ -0.61
NPIPB4-221ENST00000545367 GMLQ99445 158 aa11.22□□□□□ -0.61
NPIPB4-221ENST00000545367 FZD1Q9UP38 647 aa11.22□□□□□ -0.61
NPIPB4-221ENST00000545367 TRIM26Q12899 539 aaPredicted RBP11.21□□□□□ -0.61
NPIPB4-221ENST00000545367 SPRYD7Q5W111 196 aa11.21□□□□□ -0.61
NPIPB4-221ENST00000545367 ARMC9Q7Z3E5 817 aa11.21□□□□□ -0.61
NPIPB4-221ENST00000545367 ARMC5Q96C12 935 aa11.21□□□□□ -0.61
NPIPB4-221ENST00000545367 MXD3Q9BW11 206 aa11.21□□□□□ -0.61
NPIPB4-221ENST00000545367 RYDENQ9NUL5 291 aaKnown RBP11.21□□□□□ -0.61
NPIPB4-221ENST00000545367 CHPF2Q9P2E5 772 aa11.21□□□□□ -0.61
NPIPB4-221ENST00000545367 UNC80Q8N2C7 3258 aa11.2□□□□□ -0.62
NPIPB4-221ENST00000545367 IGF2BP3O00425 579 aaKnown RBP eCLIP11.2□□□□□ -0.62
NPIPB4-221ENST00000545367 IRS4O14654 1257 aaPredicted RBP11.2□□□□□ -0.62
NPIPB4-221ENST00000545367 ALDH1A1P00352 501 aa11.2□□□□□ -0.62
NPIPB4-221ENST00000545367 FBXO22Q8NEZ5 403 aa11.2□□□□□ -0.62
NPIPB4-221ENST00000545367 ERO1AQ96HE7 468 aa11.2□□□□□ -0.62
NPIPB4-221ENST00000545367 MFRPQ9BY79 579 aa11.2□□□□□ -0.62
NPIPB4-221ENST00000545367 SEC31BQ9NQW1 1179 aa11.2□□□□□ -0.62
NPIPB4-221ENST00000545367 PODXL2Q9NZ53 605 aa11.2□□□□□ -0.62
NPIPB4-221ENST00000545367 ANGEL1Q9UNK9 670 aaKnown RBP11.2□□□□□ -0.62
NPIPB4-221ENST00000545367 PTPN22Q9Y2R2 807 aa11.2□□□□□ -0.62
NPIPB4-221ENST00000545367 MED23Q9ULK4 1368 aa11.19□□□□□ -0.62
NPIPB4-221ENST00000545367 XDHP47989 1333 aa11.19□□□□□ -0.62
NPIPB4-221ENST00000545367 USP17L3A6NCW0 530 aa11.19□□□□□ -0.62
NPIPB4-221ENST00000545367 USP17L4A6NCW7 530 aa11.19□□□□□ -0.62
NPIPB4-221ENST00000545367 H0YGN5 161 aa11.19□□□□□ -0.62
NPIPB4-221ENST00000545367 DLL1O00548 723 aa11.19□□□□□ -0.62
NPIPB4-221ENST00000545367 MYCP01106 439 aaPredicted RBP11.19□□□□□ -0.62
NPIPB4-221ENST00000545367 RPS8P62241 208 aaKnown RBP11.19□□□□□ -0.62
NPIPB4-221ENST00000545367 CRHR2Q13324 411 aa11.19□□□□□ -0.62
NPIPB4-221ENST00000545367 KRT24Q2M2I5 525 aa11.19□□□□□ -0.62
NPIPB4-221ENST00000545367 MAMSTRQ6ZN01 415 aa11.19□□□□□ -0.62
NPIPB4-221ENST00000545367 USP17L1Q7RTZ2 530 aa11.19□□□□□ -0.62
NPIPB4-221ENST00000545367 APOBEC3FQ8IUX4 373 aaKnown RBP11.19□□□□□ -0.62
NPIPB4-221ENST00000545367 WNK4Q96J92 1243 aa11.19□□□□□ -0.62
NPIPB4-221ENST00000545367 CLMNQ96JQ2 1002 aa11.19□□□□□ -0.62
NPIPB4-221ENST00000545367 CCDC85AQ96PX6 553 aaPredicted RBP11.19□□□□□ -0.62
NPIPB4-221ENST00000545367 MANSC4A6NHS7 340 aaPredicted RBP11.18□□□□□ -0.62
NPIPB4-221ENST00000545367 WNT10BO00744 389 aa11.18□□□□□ -0.62
NPIPB4-221ENST00000545367 GTPBP6O43824 516 aaPredicted RBP11.18□□□□□ -0.62
NPIPB4-221ENST00000545367 CAP1Q01518 475 aa11.18□□□□□ -0.62
NPIPB4-221ENST00000545367 PLBD2Q8NHP8 589 aa11.18□□□□□ -0.62
NPIPB4-221ENST00000545367 ZNF333Q96JL9 665 aa11.18□□□□□ -0.62
NPIPB4-221ENST00000545367 PLEKHF1Q96S99 279 aa11.18□□□□□ -0.62
NPIPB4-221ENST00000545367 ISCA1Q9BUE6 129 aa11.18□□□□□ -0.62
NPIPB4-221ENST00000545367 EFCC1Q9HA90 598 aa11.18□□□□□ -0.62
NPIPB4-221ENST00000545367 POTEB2H3BUK9 544 aa11.17□□□□□ -0.62
NPIPB4-221ENST00000545367 SLC9C1Q4G0N8 1177 aa11.17□□□□□ -0.62
NPIPB4-221ENST00000545367 ALPK3Q96L96 1907 aa11.17□□□□□ -0.62
NPIPB4-221ENST00000545367 ZBTB48P10074 688 aaPredicted RBP11.16□□□□□ -0.62
NPIPB4-221ENST00000545367 SLC4A8Q2Y0W8 1093 aa11.16□□□□□ -0.62
NPIPB4-221ENST00000545367 DACT2Q5SW24 774 aa11.16□□□□□ -0.62
NPIPB4-221ENST00000545367 LDLRAD1Q5T700 205 aa11.16□□□□□ -0.62
NPIPB4-221ENST00000545367 OGFOD1Q8N543 542 aa11.16□□□□□ -0.62
NPIPB4-221ENST00000545367 OTUD5Q96G74 571 aa11.16□□□□□ -0.62
NPIPB4-221ENST00000545367 MS4A4AQ96JQ5 239 aa11.16□□□□□ -0.62
NPIPB4-221ENST00000545367 PTCH2Q9Y6C5 1203 aa11.16□□□□□ -0.62
NPIPB4-221ENST00000545367 MYO3BQ8WXR4 1341 aa11.15□□□□□ -0.62
NPIPB4-221ENST00000545367 WTIPA6NIX2 430 aaPredicted RBP11.15□□□□□ -0.62
NPIPB4-221ENST00000545367 CCDC152Q4G0S7 254 aa11.15□□□□□ -0.62
NPIPB4-221ENST00000545367 HDGFL1Q5TGJ6 251 aa11.15□□□□□ -0.62
NPIPB4-221ENST00000545367 KIAA0825Q8IV33 1275 aa11.15□□□□□ -0.62
NPIPB4-221ENST00000545367 SLC17A8Q8NDX2 589 aa11.15□□□□□ -0.62
NPIPB4-221ENST00000545367 MGAMO43451 1857 aa11.15□□□□□ -0.63
NPIPB4-221ENST00000545367 ATP2B4P23634 1241 aa11.14□□□□□ -0.63
NPIPB4-221ENST00000545367 GJA5P36382 358 aa11.14□□□□□ -0.63
NPIPB4-221ENST00000545367 ANKRD13DQ6ZTN6 518 aa11.14□□□□□ -0.63
NPIPB4-221ENST00000545367 PODNQ7Z5L7 613 aa11.14□□□□□ -0.63
NPIPB4-221ENST00000545367 ANKRD18AQ8IVF6 992 aa11.14□□□□□ -0.63
NPIPB4-221ENST00000545367 RBM27Q9P2N5 1060 aaKnown RBP11.14□□□□□ -0.63
NPIPB4-221ENST00000545367 SP3Q02447 781 aa11.13□□□□□ -0.63
NPIPB4-221ENST00000545367 ZBTB38Q8NAP3 1195 aaPredicted RBP11.13□□□□□ -0.63
NPIPB4-221ENST00000545367 SH3TC2Q8TF17 1288 aa11.13□□□□□ -0.63
NPIPB4-221ENST00000545367 JARID2Q92833 1246 aaPredicted RBP11.13□□□□□ -0.63
NPIPB4-221ENST00000545367 SLC10A4Q96EP9 437 aa11.13□□□□□ -0.63
NPIPB4-221ENST00000545367 KLRK1P26718 216 aa11.12□□□□□ -0.63
NPIPB4-221ENST00000545367 RIPK4P57078 832 aa11.12□□□□□ -0.63
NPIPB4-221ENST00000545367 INHBEP58166 350 aa11.12□□□□□ -0.63
NPIPB4-221ENST00000545367 CCER1Q8TC90 406 aaPredicted RBP11.12□□□□□ -0.63
NPIPB4-221ENST00000545367 DEFB129Q9H1M3 183 aa11.12□□□□□ -0.63
NPIPB4-221ENST00000545367 CLRN2A0PK11 232 aa11.11□□□□□ -0.63
NPIPB4-221ENST00000545367 LMOD3Q0VAK6 560 aa11.11□□□□□ -0.63
NPIPB4-221ENST00000545367 STRIP1Q5VSL9 837 aa11.11□□□□□ -0.63
NPIPB4-221ENST00000545367 OTUD7BQ6GQQ9 843 aa11.11□□□□□ -0.63
NPIPB4-221ENST00000545367 HOMEZQ8IX15 550 aa11.11□□□□□ -0.63
NPIPB4-221ENST00000545367 SHISA4Q96DD7 197 aa11.11□□□□□ -0.63
NPIPB4-221ENST00000545367 MYD88Q99836 296 aa11.11□□□□□ -0.63
NPIPB4-221ENST00000545367 TMEM121BQ9BXQ6 578 aaPredicted RBP11.11□□□□□ -0.63
NPIPB4-221ENST00000545367 SCUBE2Q9NQ36 999 aa11.11□□□□□ -0.63
NPIPB4-221ENST00000545367 BABAM1Q9NWV8 329 aa11.11□□□□□ -0.63
NPIPB4-221ENST00000545367 DBF4Q9UBU7 674 aaPredicted RBP11.11□□□□□ -0.63
NPIPB4-221ENST00000545367 LAS1LQ9Y4W2 734 aaKnown RBP11.11□□□□□ -0.63
NPIPB4-221ENST00000545367 PCDHAC2Q9Y5I4 1007 aa11.11□□□□□ -0.63
NPIPB4-221ENST00000545367 ZNF804BA4D1E1 1349 aa11.1□□□□□ -0.63
NPIPB4-221ENST00000545367 PPP1R12BO60237 982 aaPredicted RBP11.1□□□□□ -0.63
NPIPB4-221ENST00000545367 PDE8AO60658 829 aa11.1□□□□□ -0.63
NPIPB4-221ENST00000545367 HSP90B1P14625 803 aaKnown RBP11.1□□□□□ -0.63
NPIPB4-221ENST00000545367 CTSWP56202 376 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms