RNA–Protein interactions for RNA: ENST00000545358.5

NPIPB3-214, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5

Gene NPIPB3, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-214ENST00000545358 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.61□□□□□ -1.35
NPIPB3-214ENST00000545358 CASZ1Q86V15 1759 aa6.61□□□□□ -1.35
NPIPB3-214ENST00000545358 UBR3Q6ZT12 1888 aa6.6□□□□□ -1.35
NPIPB3-214ENST00000545358 MED23Q9ULK4 1368 aa6.6□□□□□ -1.35
NPIPB3-214ENST00000545358 A0A1B0GUL6 1792 aa6.6□□□□□ -1.35
NPIPB3-214ENST00000545358 RGPD3A6NKT7 1758 aaPredicted RBP6.6□□□□□ -1.35
NPIPB3-214ENST00000545358 RGPD4Q7Z3J3 1758 aa6.6□□□□□ -1.35
NPIPB3-214ENST00000545358 MAP4K4O95819 1239 aaPredicted RBP6.6□□□□□ -1.35
NPIPB3-214ENST00000545358 ITGA6P23229 1130 aa6.6□□□□□ -1.35
NPIPB3-214ENST00000545358 CCDC152Q4G0S7 254 aa6.6□□□□□ -1.35
NPIPB3-214ENST00000545358 LRRC24Q50LG9 513 aa6.6□□□□□ -1.35
NPIPB3-214ENST00000545358 SUSD4Q5VX71 490 aa6.6□□□□□ -1.35
NPIPB3-214ENST00000545358 ZNF772Q68DY9 489 aaPredicted RBP6.6□□□□□ -1.35
NPIPB3-214ENST00000545358 FAM196AQ6ZSG2 479 aa6.6□□□□□ -1.35
NPIPB3-214ENST00000545358 HAUS7Q99871 368 aa6.6□□□□□ -1.35
NPIPB3-214ENST00000545358 DBNDD2Q9BQY9 259 aa6.6□□□□□ -1.35
NPIPB3-214ENST00000545358 GREM2Q9H772 168 aa6.6□□□□□ -1.35
NPIPB3-214ENST00000545358 QTRT2Q9H974 415 aaKnown RBP6.6□□□□□ -1.35
NPIPB3-214ENST00000545358 CDHR5Q9HBB8 845 aa6.6□□□□□ -1.35
NPIPB3-214ENST00000545358 ANO2Q9NQ90 1003 aa6.6□□□□□ -1.35
NPIPB3-214ENST00000545358 NARFQ9UHQ1 456 aa6.6□□□□□ -1.35
NPIPB3-214ENST00000545358 TSKSQ9UJT2 592 aa6.6□□□□□ -1.35
NPIPB3-214ENST00000545358 NIP7Q9Y221 180 aaKnown RBP eCLIP6.6□□□□□ -1.35
NPIPB3-214ENST00000545358 MROH5Q6ZUA9 1318 aa6.59□□□□□ -1.35
NPIPB3-214ENST00000545358 A0A1B0GUL7 405 aa6.59□□□□□ -1.35
NPIPB3-214ENST00000545358 K7ELQ4 463 aaPredicted RBP6.59□□□□□ -1.35
NPIPB3-214ENST00000545358 GNPATO15228 680 aa6.59□□□□□ -1.35
NPIPB3-214ENST00000545358 SLC4A3P48751 1232 aa6.59□□□□□ -1.35
NPIPB3-214ENST00000545358 METTL24Q5JXM2 366 aa6.59□□□□□ -1.35
NPIPB3-214ENST00000545358 SLC27A3Q5K4L6 730 aa6.59□□□□□ -1.35
NPIPB3-214ENST00000545358 THSD4Q6ZMP0 1018 aa6.59□□□□□ -1.35
NPIPB3-214ENST00000545358 KIAA1211Q6ZU35 1233 aa6.59□□□□□ -1.35
NPIPB3-214ENST00000545358 NYAP1Q6ZVC0 841 aa6.59□□□□□ -1.35
NPIPB3-214ENST00000545358 KRT27Q7Z3Y8 459 aa6.59□□□□□ -1.35
NPIPB3-214ENST00000545358 ZNF594Q96JF6 807 aaPredicted RBP6.59□□□□□ -1.35
NPIPB3-214ENST00000545358 ZFRQ96KR1 1074 aaKnown RBP6.59□□□□□ -1.35
NPIPB3-214ENST00000545358 FSD1Q9BTV5 496 aa6.59□□□□□ -1.35
NPIPB3-214ENST00000545358 NYXQ9GZU5 481 aa6.59□□□□□ -1.35
NPIPB3-214ENST00000545358 LSG1Q9H089 658 aaKnown RBP6.59□□□□□ -1.35
NPIPB3-214ENST00000545358 BOLA2Q9H3K6 86 aa6.59□□□□□ -1.35
NPIPB3-214ENST00000545358 RTCBQ9Y3I0 505 aaKnown RBP6.59□□□□□ -1.35
NPIPB3-214ENST00000545358 CCDC171Q6TFL3 1326 aa6.58□□□□□ -1.36
NPIPB3-214ENST00000545358 HSPA4P34932 840 aa6.58□□□□□ -1.36
NPIPB3-214ENST00000545358 MCM2P49736 904 aa6.58□□□□□ -1.36
NPIPB3-214ENST00000545358 RBM6P78332 1123 aaKnown RBP6.58□□□□□ -1.36
NPIPB3-214ENST00000545358 PTGDRQ13258 359 aa6.58□□□□□ -1.36
NPIPB3-214ENST00000545358 ATP2B3Q16720 1220 aa6.58□□□□□ -1.36
NPIPB3-214ENST00000545358 LRRFIP1Q32MZ4 808 aaKnown RBP6.58□□□□□ -1.36
NPIPB3-214ENST00000545358 CCDC158Q5M9N0 1113 aa6.58□□□□□ -1.36
NPIPB3-214ENST00000545358 LDHAL6AQ6ZMR3 332 aa6.58□□□□□ -1.36
NPIPB3-214ENST00000545358 PTF1AQ7RTS3 328 aa6.58□□□□□ -1.36
NPIPB3-214ENST00000545358 SYNE4Q8N205 404 aa6.58□□□□□ -1.36
NPIPB3-214ENST00000545358 VGLL2Q8N8G2 317 aa6.58□□□□□ -1.36
NPIPB3-214ENST00000545358 KBTBD3Q8NAB2 608 aa6.58□□□□□ -1.36
NPIPB3-214ENST00000545358 TTC13Q8NBP0 860 aa6.58□□□□□ -1.36
NPIPB3-214ENST00000545358 ZNF512BQ96KM6 892 aaPredicted RBP6.58□□□□□ -1.36
NPIPB3-214ENST00000545358 CDC5LQ99459 802 aaKnown RBP6.58□□□□□ -1.36
NPIPB3-214ENST00000545358 PUS3Q9BZE2 481 aaKnown RBP6.58□□□□□ -1.36
NPIPB3-214ENST00000545358 IL25Q9H293 177 aa6.58□□□□□ -1.36
NPIPB3-214ENST00000545358 NPDC1Q9NQX5 325 aaPredicted RBP6.58□□□□□ -1.36
NPIPB3-214ENST00000545358 CNNM1Q9NRU3 951 aa6.58□□□□□ -1.36
NPIPB3-214ENST00000545358 RIPOR2Q9Y4F9 1068 aa6.58□□□□□ -1.36
NPIPB3-214ENST00000545358 MYH7P12883 1935 aa6.58□□□□□ -1.36
NPIPB3-214ENST00000545358 CARMIL3Q8ND23 1372 aa6.57□□□□□ -1.36
NPIPB3-214ENST00000545358 TNS1Q9HBL0 1735 aaKnown RBP6.57□□□□□ -1.36
NPIPB3-214ENST00000545358 ZPR1O75312 459 aa6.57□□□□□ -1.36
NPIPB3-214ENST00000545358 IFIT1P09914 478 aaKnown RBP6.57□□□□□ -1.36
NPIPB3-214ENST00000545358 HCLS1P14317 486 aaPredicted RBP6.57□□□□□ -1.36
NPIPB3-214ENST00000545358 IGHMBP2P38935 993 aaKnown RBP6.57□□□□□ -1.36
NPIPB3-214ENST00000545358 NMIQ13287 307 aaPredicted RBP6.57□□□□□ -1.36
NPIPB3-214ENST00000545358 PUM3Q15397 648 aaKnown RBP6.57□□□□□ -1.36
NPIPB3-214ENST00000545358 TTC39AQ5SRH9 613 aa6.57□□□□□ -1.36
NPIPB3-214ENST00000545358 FAM182BQ5T319 152 aa6.57□□□□□ -1.36
NPIPB3-214ENST00000545358 CWC27Q6UX04 472 aaKnown RBP6.57□□□□□ -1.36
NPIPB3-214ENST00000545358 KCNB2Q92953 911 aa6.57□□□□□ -1.36
NPIPB3-214ENST00000545358 TATDN2Q93075 761 aa6.57□□□□□ -1.36
NPIPB3-214ENST00000545358 NEUROD6Q96NK8 337 aa6.57□□□□□ -1.36
NPIPB3-214ENST00000545358 DNAJC2Q99543 621 aaKnown RBP6.57□□□□□ -1.36
NPIPB3-214ENST00000545358 ANTXR1Q9H6X2 564 aa6.57□□□□□ -1.36
NPIPB3-214ENST00000545358 PAG1Q9NWQ8 432 aa6.57□□□□□ -1.36
NPIPB3-214ENST00000545358 DOCK2Q92608 1830 aa6.57□□□□□ -1.36
NPIPB3-214ENST00000545358 TNRC6CQ9HCJ0 1690 aaKnown RBP6.56□□□□□ -1.36
NPIPB3-214ENST00000545358 A0A0D9SFI3 127 aa6.56□□□□□ -1.36
NPIPB3-214ENST00000545358 SOWAHBA6NEL2 793 aa6.56□□□□□ -1.36
NPIPB3-214ENST00000545358 PDE8BO95263 885 aa6.56□□□□□ -1.36
NPIPB3-214ENST00000545358 CD2BP2O95400 341 aaKnown RBP6.56□□□□□ -1.36
NPIPB3-214ENST00000545358 ZFYP08048 801 aaPredicted RBP6.56□□□□□ -1.36
NPIPB3-214ENST00000545358 SLC5A1P13866 664 aa6.56□□□□□ -1.36
NPIPB3-214ENST00000545358 FGFR2P21802 821 aa6.56□□□□□ -1.36
NPIPB3-214ENST00000545358 SSFA2P28290 1259 aa6.56□□□□□ -1.36
NPIPB3-214ENST00000545358 ARID4AP29374 1257 aaPredicted RBP6.56□□□□□ -1.36
NPIPB3-214ENST00000545358 TIMM10P62072 90 aa6.56□□□□□ -1.36
NPIPB3-214ENST00000545358 HIC1Q14526 733 aa6.56□□□□□ -1.36
NPIPB3-214ENST00000545358 SF3B3Q15393 1217 aaKnown RBP6.56□□□□□ -1.36
NPIPB3-214ENST00000545358 SLC10A5Q5PT55 438 aa6.56□□□□□ -1.36
NPIPB3-214ENST00000545358 GORABQ5T7V8 394 aa6.56□□□□□ -1.36
NPIPB3-214ENST00000545358 USPL1Q5W0Q7 1092 aa6.56□□□□□ -1.36
NPIPB3-214ENST00000545358 TBC1D9BQ66K14 1250 aa6.56□□□□□ -1.36
NPIPB3-214ENST00000545358 LPIN2Q92539 896 aa6.56□□□□□ -1.36
NPIPB3-214ENST00000545358 XAGE2Q96GT9 111 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms