RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 PSME4Q14997 1843 aa19.53■□□□□ 0.72
CCDC78-216ENST00000544996 FGFR2P21802 821 aa19.53■□□□□ 0.72
CCDC78-216ENST00000544996 ANGEL2Q5VTE6 544 aaKnown RBP19.53■□□□□ 0.72
CCDC78-216ENST00000544996 MKRN1Q9UHC7 482 aaKnown RBP19.53■□□□□ 0.72
CCDC78-216ENST00000544996 JAG2Q9Y219 1238 aa19.53■□□□□ 0.72
CCDC78-216ENST00000544996 FAM205AQ6ZU69 1335 aa19.52■□□□□ 0.72
CCDC78-216ENST00000544996 ZBTB7BO15156 539 aaPredicted RBP19.52■□□□□ 0.72
CCDC78-216ENST00000544996 CELF2O95319 508 aaKnown RBP19.52■□□□□ 0.72
CCDC78-216ENST00000544996 CST9Q5W186 159 aa19.52■□□□□ 0.72
CCDC78-216ENST00000544996 CERS5Q8N5B7 392 aa19.52■□□□□ 0.72
CCDC78-216ENST00000544996 ZNF408Q9H9D4 720 aa19.52■□□□□ 0.72
CCDC78-216ENST00000544996 F8W031 263 aaPredicted RBP19.51■□□□□ 0.71
CCDC78-216ENST00000544996 BCAMP50895 628 aa19.51■□□□□ 0.71
CCDC78-216ENST00000544996 ATP2B3Q16720 1220 aa19.51■□□□□ 0.71
CCDC78-216ENST00000544996 MFSD14BQ5SR56 506 aa19.51■□□□□ 0.71
CCDC78-216ENST00000544996 JMYQ8N9B5 988 aa19.51■□□□□ 0.71
CCDC78-216ENST00000544996 PANK1Q8TE04 598 aa19.51■□□□□ 0.71
CCDC78-216ENST00000544996 ASTN2O75129 1339 aaPredicted RBP19.51■□□□□ 0.71
CCDC78-216ENST00000544996 PITPNM2Q9BZ72 1349 aa19.51■□□□□ 0.71
CCDC78-216ENST00000544996 CNTNAP1P78357 1384 aa19.5■□□□□ 0.71
CCDC78-216ENST00000544996 RASSF10A6NK89 507 aa19.5■□□□□ 0.71
CCDC78-216ENST00000544996 WNT10BO00744 389 aa19.5■□□□□ 0.71
CCDC78-216ENST00000544996 DLGAP5Q15398 846 aa19.5■□□□□ 0.71
CCDC78-216ENST00000544996 DEFB115Q30KQ5 88 aa19.5■□□□□ 0.71
CCDC78-216ENST00000544996 NBPF9Q3BBW0 867 aa19.5■□□□□ 0.71
CCDC78-216ENST00000544996 IQSEC3Q9UPP2 1182 aaPredicted RBP19.5■□□□□ 0.71
CCDC78-216ENST00000544996 PNMA6EA0A0J9YXQ4 647 aa19.49■□□□□ 0.71
CCDC78-216ENST00000544996 ADM5C9JUS6 153 aa19.49■□□□□ 0.71
CCDC78-216ENST00000544996 CHAF1AQ13111 956 aaPredicted RBP19.49■□□□□ 0.71
CCDC78-216ENST00000544996 G3BP1Q13283 466 aaKnown RBP eCLIP19.49■□□□□ 0.71
CCDC78-216ENST00000544996 TBC1D22AQ8WUA7 517 aa19.49■□□□□ 0.71
CCDC78-216ENST00000544996 GNL3LQ9NVN8 582 aaKnown RBP19.49■□□□□ 0.71
CCDC78-216ENST00000544996 AKAP2Q9Y2D5 859 aa19.49■□□□□ 0.71
CCDC78-216ENST00000544996 ATP8B2P98198 1209 aa19.48■□□□□ 0.71
CCDC78-216ENST00000544996 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.48■□□□□ 0.71
CCDC78-216ENST00000544996 C1orf115Q9H7X2 142 aa19.48■□□□□ 0.71
CCDC78-216ENST00000544996 TLL2Q9Y6L7 1015 aa19.48■□□□□ 0.71
CCDC78-216ENST00000544996 MYO1BO43795 1136 aa19.47■□□□□ 0.71
CCDC78-216ENST00000544996 RBM5P52756 815 aaKnown RBP eCLIP19.47■□□□□ 0.71
CCDC78-216ENST00000544996 PAXIP1Q6ZW49 1069 aaPredicted RBP19.47■□□□□ 0.71
CCDC78-216ENST00000544996 MTMR14Q8NCE2 650 aa19.47■□□□□ 0.71
CCDC78-216ENST00000544996 TTF2Q9UNY4 1162 aaKnown RBP19.47■□□□□ 0.71
CCDC78-216ENST00000544996 TFCP2Q12800 502 aa19.46■□□□□ 0.71
CCDC78-216ENST00000544996 CFAP100Q494V2 611 aa19.46■□□□□ 0.71
CCDC78-216ENST00000544996 DLK2Q6UY11 383 aa19.46■□□□□ 0.71
CCDC78-216ENST00000544996 SAPCD2Q86UD0 394 aa19.46■□□□□ 0.71
CCDC78-216ENST00000544996 C2orf69Q8N8R5 385 aa19.46■□□□□ 0.71
CCDC78-216ENST00000544996 SSH3Q8TE77 659 aa19.46■□□□□ 0.71
CCDC78-216ENST00000544996 ZBED3Q96IU2 234 aaPredicted RBP19.46■□□□□ 0.71
CCDC78-216ENST00000544996 CHMP4BQ9H444 224 aaKnown RBP19.46■□□□□ 0.71
CCDC78-216ENST00000544996 ECE1P42892 770 aa19.45■□□□□ 0.7
CCDC78-216ENST00000544996 VEGFBP49765 207 aa19.45■□□□□ 0.7
CCDC78-216ENST00000544996 POLA2Q14181 598 aa19.45■□□□□ 0.7
CCDC78-216ENST00000544996 MVPQ14764 893 aaKnown RBP19.45■□□□□ 0.7
CCDC78-216ENST00000544996 APOBEC3FQ8IUX4 373 aaKnown RBP19.45■□□□□ 0.7
CCDC78-216ENST00000544996 WDR66Q8TBY9 1149 aa19.45■□□□□ 0.7
CCDC78-216ENST00000544996 CDCA5Q96FF9 252 aa19.45■□□□□ 0.7
CCDC78-216ENST00000544996 SERPINA10Q9UK55 444 aa19.45■□□□□ 0.7
CCDC78-216ENST00000544996 DDX19BQ9UMR2 479 aa19.45■□□□□ 0.7
CCDC78-216ENST00000544996 ZNF646O15015 1829 aaPredicted RBP19.45■□□□□ 0.7
CCDC78-216ENST00000544996 A0A1B0GUL7 405 aa19.44■□□□□ 0.7
CCDC78-216ENST00000544996 SPDYE2BA6NHP3 402 aa19.44■□□□□ 0.7
CCDC78-216ENST00000544996 SPDYE6P0CI01 402 aa19.44■□□□□ 0.7
CCDC78-216ENST00000544996 TIMM10P62072 90 aa19.44■□□□□ 0.7
CCDC78-216ENST00000544996 OS9Q13438 667 aaPredicted RBP19.44■□□□□ 0.7
CCDC78-216ENST00000544996 HHIPL1Q96JK4 782 aa19.44■□□□□ 0.7
CCDC78-216ENST00000544996 YTHDC1Q96MU7 727 aaKnown RBP19.44■□□□□ 0.7
CCDC78-216ENST00000544996 GBA2Q9HCG7 927 aaPredicted RBP19.44■□□□□ 0.7
CCDC78-216ENST00000544996 COG6Q9Y2V7 657 aa19.44■□□□□ 0.7
CCDC78-216ENST00000544996 SUGT1Q9Y2Z0 365 aa19.44■□□□□ 0.7
CCDC78-216ENST00000544996 SEMA3EO15041 775 aa19.43■□□□□ 0.7
CCDC78-216ENST00000544996 SURF6O75683 361 aaKnown RBP19.43■□□□□ 0.7
CCDC78-216ENST00000544996 NEUROD6Q96NK8 337 aa19.43■□□□□ 0.7
CCDC78-216ENST00000544996 WDR33Q9C0J8 1336 aaKnown RBP19.43■□□□□ 0.7
CCDC78-216ENST00000544996 ADORA1P30542 326 aa19.42■□□□□ 0.7
CCDC78-216ENST00000544996 HUNKP57058 714 aa19.42■□□□□ 0.7
CCDC78-216ENST00000544996 HDLBPQ00341 1268 aaKnown RBP19.42■□□□□ 0.7
CCDC78-216ENST00000544996 PDE3AQ14432 1141 aa19.42■□□□□ 0.7
CCDC78-216ENST00000544996 GORABQ5T7V8 394 aa19.42■□□□□ 0.7
CCDC78-216ENST00000544996 CCDC102BQ68D86 513 aa19.42■□□□□ 0.7
CCDC78-216ENST00000544996 PRMT6Q96LA8 375 aaPredicted RBP19.42■□□□□ 0.7
CCDC78-216ENST00000544996 DENND2AQ9ULE3 1009 aa19.42■□□□□ 0.7
CCDC78-216ENST00000544996 SCAF8Q9UPN6 1271 aaKnown RBP19.42■□□□□ 0.7
CCDC78-216ENST00000544996 MAST3O60307 1309 aa19.42■□□□□ 0.7
CCDC78-216ENST00000544996 NF2P35240 595 aa19.41■□□□□ 0.7
CCDC78-216ENST00000544996 PHKA1P46020 1223 aa19.41■□□□□ 0.7
CCDC78-216ENST00000544996 GRM1Q13255 1194 aa19.41■□□□□ 0.7
CCDC78-216ENST00000544996 CEP85Q6P2H3 762 aa19.41■□□□□ 0.7
CCDC78-216ENST00000544996 XAGE2Q96GT9 111 aa19.41■□□□□ 0.7
CCDC78-216ENST00000544996 CAPNS2Q96L46 248 aa19.41■□□□□ 0.7
CCDC78-216ENST00000544996 TRPM7Q96QT4 1865 aa19.41■□□□□ 0.7
CCDC78-216ENST00000544996 CRKP46108 304 aa19.4■□□□□ 0.7
CCDC78-216ENST00000544996 FKBP1BP68106 108 aa19.4■□□□□ 0.7
CCDC78-216ENST00000544996 CYP4F22Q6NT55 531 aa19.4■□□□□ 0.7
CCDC78-216ENST00000544996 TEKT1Q969V4 418 aa19.4■□□□□ 0.7
CCDC78-216ENST00000544996 PCDHAC2Q9Y5I4 1007 aa19.4■□□□□ 0.7
CCDC78-216ENST00000544996 CLRN2A0PK11 232 aa19.39■□□□□ 0.69
CCDC78-216ENST00000544996 ZBTB22O15209 634 aa19.39■□□□□ 0.69
CCDC78-216ENST00000544996 GRIK5Q16478 980 aa19.39■□□□□ 0.69
CCDC78-216ENST00000544996 ZGPATQ8N5A5 531 aaKnown RBP19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms