RNA–Protein interactions for RNA: ENST00000544983.1

SNHG1-221, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-221ENST00000544983 PPP4R2Q9NY27 417 aa14.39□□□□□ -0.11
SNHG1-221ENST00000544983 DBNLQ9UJU6 430 aaKnown RBP14.39□□□□□ -0.11
SNHG1-221ENST00000544983 RAD17O75943 681 aa14.38□□□□□ -0.11
SNHG1-221ENST00000544983 TTC39AQ5SRH9 613 aa14.38□□□□□ -0.11
SNHG1-221ENST00000544983 ZGPATQ8N5A5 531 aaKnown RBP14.38□□□□□ -0.11
SNHG1-221ENST00000544983 AGBL3Q8NEM8 1001 aa14.38□□□□□ -0.11
SNHG1-221ENST00000544983 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.38□□□□□ -0.11
SNHG1-221ENST00000544983 DPF2Q92785 391 aa14.38□□□□□ -0.11
SNHG1-221ENST00000544983 L3MBTL3Q96JM7 780 aaPredicted RBP14.38□□□□□ -0.11
SNHG1-221ENST00000544983 DBNDD2Q9BQY9 259 aa14.38□□□□□ -0.11
SNHG1-221ENST00000544983 CCDC8Q9H0W5 538 aaPredicted RBP14.38□□□□□ -0.11
SNHG1-221ENST00000544983 SUGT1Q9Y2Z0 365 aa14.38□□□□□ -0.11
SNHG1-221ENST00000544983 PSME4Q14997 1843 aa14.37□□□□□ -0.11
SNHG1-221ENST00000544983 PSMD14O00487 310 aa14.37□□□□□ -0.11
SNHG1-221ENST00000544983 GTF2IP78347 998 aa14.37□□□□□ -0.11
SNHG1-221ENST00000544983 DACT2Q5SW24 774 aa14.37□□□□□ -0.11
SNHG1-221ENST00000544983 RSBN1LQ6PCB5 846 aaPredicted RBP14.37□□□□□ -0.11
SNHG1-221ENST00000544983 CHD1LQ86WJ1 897 aa14.37□□□□□ -0.11
SNHG1-221ENST00000544983 TTC41PQ6P2S7 1318 aa14.37□□□□□ -0.11
SNHG1-221ENST00000544983 IQCA1LA6NCM1 817 aa14.36□□□□□ -0.11
SNHG1-221ENST00000544983 SMARCA5O60264 1052 aaPredicted RBP14.36□□□□□ -0.11
SNHG1-221ENST00000544983 RASGRF1Q13972 1273 aa14.36□□□□□ -0.11
SNHG1-221ENST00000544983 ECHDC1Q9NTX5 307 aa14.36□□□□□ -0.11
SNHG1-221ENST00000544983 ZNF541Q9H0D2 1346 aa14.36□□□□□ -0.11
SNHG1-221ENST00000544983 SALL1Q9NSC2 1324 aa14.36□□□□□ -0.11
SNHG1-221ENST00000544983 SCN9AQ15858 1988 aa14.35□□□□□ -0.11
SNHG1-221ENST00000544983 ERC2O15083 957 aa14.35□□□□□ -0.11
SNHG1-221ENST00000544983 ATP5JP18859 108 aa14.35□□□□□ -0.11
SNHG1-221ENST00000544983 SPTY2D1Q68D10 685 aaPredicted RBP14.35□□□□□ -0.11
SNHG1-221ENST00000544983 TMED8Q6PL24 325 aaPredicted RBP14.35□□□□□ -0.11
SNHG1-221ENST00000544983 SPATA5Q8NB90 893 aa14.35□□□□□ -0.11
SNHG1-221ENST00000544983 KCNQ5Q9NR82 932 aa14.35□□□□□ -0.11
SNHG1-221ENST00000544983 GJA3Q9Y6H8 435 aa14.35□□□□□ -0.11
SNHG1-221ENST00000544983 DDNO94850 711 aaPredicted RBP14.34□□□□□ -0.11
SNHG1-221ENST00000544983 HSPA6P17066 643 aa14.34□□□□□ -0.11
SNHG1-221ENST00000544983 MX1P20591 662 aa14.34□□□□□ -0.11
SNHG1-221ENST00000544983 LMOD1P29536 600 aaPredicted RBP14.34□□□□□ -0.11
SNHG1-221ENST00000544983 MFSD14BQ5SR56 506 aa14.34□□□□□ -0.11
SNHG1-221ENST00000544983 B4GALNT3Q6L9W6 998 aa14.34□□□□□ -0.11
SNHG1-221ENST00000544983 OGFOD1Q8N543 542 aa14.34□□□□□ -0.11
SNHG1-221ENST00000544983 FBXW7Q969H0 707 aa14.34□□□□□ -0.11
SNHG1-221ENST00000544983 GMLQ99445 158 aa14.34□□□□□ -0.11
SNHG1-221ENST00000544983 MRIQ9BWK5 157 aa14.34□□□□□ -0.11
SNHG1-221ENST00000544983 TLR7Q9NYK1 1049 aaKnown RBP14.34□□□□□ -0.11
SNHG1-221ENST00000544983 HMG20BQ9P0W2 317 aa14.34□□□□□ -0.11
SNHG1-221ENST00000544983 STAP2Q9UGK3 403 aa14.34□□□□□ -0.11
SNHG1-221ENST00000544983 MAST3O60307 1309 aa14.34□□□□□ -0.11
SNHG1-221ENST00000544983 AOX1Q06278 1338 aa14.34□□□□□ -0.11
SNHG1-221ENST00000544983 GLRX3O76003 335 aaKnown RBP14.33□□□□□ -0.12
SNHG1-221ENST00000544983 SLC34A2O95436 690 aa14.33□□□□□ -0.12
SNHG1-221ENST00000544983 MCAMP43121 646 aa14.33□□□□□ -0.12
SNHG1-221ENST00000544983 CHAF1AQ13111 956 aaPredicted RBP14.33□□□□□ -0.12
SNHG1-221ENST00000544983 TTF1Q15361 905 aaPredicted RBP14.33□□□□□ -0.12
SNHG1-221ENST00000544983 LNPKQ9C0E8 428 aa14.33□□□□□ -0.12
SNHG1-221ENST00000544983 HDAC9Q9UKV0 1011 aa14.33□□□□□ -0.12
SNHG1-221ENST00000544983 IQSEC3Q9UPP2 1182 aaPredicted RBP14.33□□□□□ -0.12
SNHG1-221ENST00000544983 MYH13Q9UKX3 1938 aa14.33□□□□□ -0.12
SNHG1-221ENST00000544983 H7C1D1 291 aa14.32□□□□□ -0.12
SNHG1-221ENST00000544983 USP17L8P0C7I0 530 aa14.32□□□□□ -0.12
SNHG1-221ENST00000544983 VEGFAP15692 232 aaPredicted RBP14.32□□□□□ -0.12
SNHG1-221ENST00000544983 GMPSP49915 693 aaPredicted RBP14.32□□□□□ -0.12
SNHG1-221ENST00000544983 HDLBPQ00341 1268 aaKnown RBP14.32□□□□□ -0.12
SNHG1-221ENST00000544983 OSBPL3Q9H4L5 887 aa14.32□□□□□ -0.12
SNHG1-221ENST00000544983 GPRC5DQ9NZD1 345 aa14.32□□□□□ -0.12
SNHG1-221ENST00000544983 HACL1Q9UJ83 578 aa14.32□□□□□ -0.12
SNHG1-221ENST00000544983 WDR90Q96KV7 1748 aa14.32□□□□□ -0.12
SNHG1-221ENST00000544983 SCN4AP35499 1836 aa14.31□□□□□ -0.12
SNHG1-221ENST00000544983 LDHBP07195 334 aaKnown RBP14.31□□□□□ -0.12
SNHG1-221ENST00000544983 SCNN1DP51172 638 aa14.31□□□□□ -0.12
SNHG1-221ENST00000544983 PDE1AP54750 535 aa14.31□□□□□ -0.12
SNHG1-221ENST00000544983 ZNF280AP59817 542 aaPredicted RBP14.31□□□□□ -0.12
SNHG1-221ENST00000544983 TICAM2Q86XR7 235 aa14.31□□□□□ -0.12
SNHG1-221ENST00000544983 SLF2Q8IX21 1173 aa14.31□□□□□ -0.12
SNHG1-221ENST00000544983 HAUS7Q99871 368 aa14.31□□□□□ -0.12
SNHG1-221ENST00000544983 BCL11AQ9H165 835 aa14.31□□□□□ -0.12
SNHG1-221ENST00000544983 CNOT7Q9UIV1 285 aaKnown RBP14.31□□□□□ -0.12
SNHG1-221ENST00000544983 SALL3Q9BXA9 1300 aa14.31□□□□□ -0.12
SNHG1-221ENST00000544983 SCARF1Q14162 830 aa14.3□□□□□ -0.12
SNHG1-221ENST00000544983 PNMA8AQ86V59 439 aaPredicted RBP14.3□□□□□ -0.12
SNHG1-221ENST00000544983 C16orf71Q8IYS4 520 aaPredicted RBP14.3□□□□□ -0.12
SNHG1-221ENST00000544983 CERS5Q8N5B7 392 aa14.3□□□□□ -0.12
SNHG1-221ENST00000544983 GPBP1L1Q9HC44 474 aaPredicted RBP14.3□□□□□ -0.12
SNHG1-221ENST00000544983 ADARB2Q9NS39 739 aaKnown RBP14.3□□□□□ -0.12
SNHG1-221ENST00000544983 SERPINA10Q9UK55 444 aa14.3□□□□□ -0.12
SNHG1-221ENST00000544983 ZBTB12Q9Y330 459 aaPredicted RBP14.3□□□□□ -0.12
SNHG1-221ENST00000544983 AKAP11Q9UKA4 1901 aa14.3□□□□□ -0.12
SNHG1-221ENST00000544983 CYP2E1P05181 493 aaPredicted RBP14.29□□□□□ -0.12
SNHG1-221ENST00000544983 ZAP70P43403 619 aa14.29□□□□□ -0.12
SNHG1-221ENST00000544983 GSTO1P78417 241 aa14.29□□□□□ -0.12
SNHG1-221ENST00000544983 LRRFIP1Q32MZ4 808 aaKnown RBP14.29□□□□□ -0.12
SNHG1-221ENST00000544983 USP50Q70EL3 339 aaPredicted RBP14.29□□□□□ -0.12
SNHG1-221ENST00000544983 ERICH6Q7L0X2 663 aa14.29□□□□□ -0.12
SNHG1-221ENST00000544983 MICALL2Q8IY33 904 aa14.29□□□□□ -0.12
SNHG1-221ENST00000544983 MTMR14Q8NCE2 650 aa14.29□□□□□ -0.12
SNHG1-221ENST00000544983 BOLA2Q9H3K6 86 aa14.29□□□□□ -0.12
SNHG1-221ENST00000544983 LRP2BPQ9P2M1 347 aa14.29□□□□□ -0.12
SNHG1-221ENST00000544983 ABCF2Q9UG63 623 aa14.29□□□□□ -0.12
SNHG1-221ENST00000544983 TTF2Q9UNY4 1162 aaKnown RBP14.29□□□□□ -0.12
SNHG1-221ENST00000544983 COL1A1P02452 1464 aaPredicted RBP14.29□□□□□ -0.12
SNHG1-221ENST00000544983 ZNF646O15015 1829 aaPredicted RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms