RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 API5Q9BZZ5 524 aaKnown RBP15.69■□□□□ 0.1
ACTN1-206ENST00000544964 CD209Q9NNX6 404 aa15.69■□□□□ 0.1
ACTN1-206ENST00000544964 PDE4DIPQ5VU43 2346 aa15.69■□□□□ 0.1
ACTN1-206ENST00000544964 COL1A1P02452 1464 aaPredicted RBP15.69■□□□□ 0.1
ACTN1-206ENST00000544964 SSC5DA1L4H1 1573 aa15.69■□□□□ 0.1
ACTN1-206ENST00000544964 GRM8O00222 908 aa15.68■□□□□ 0.1
ACTN1-206ENST00000544964 IPO8O15397 1037 aaKnown RBP15.68■□□□□ 0.1
ACTN1-206ENST00000544964 TRPA1O75762 1119 aa15.68■□□□□ 0.1
ACTN1-206ENST00000544964 KCNJ4P48050 445 aa15.68■□□□□ 0.1
ACTN1-206ENST00000544964 IFIT5Q13325 482 aaKnown RBP15.68■□□□□ 0.1
ACTN1-206ENST00000544964 ZKSCAN2Q63HK3 967 aa15.68■□□□□ 0.1
ACTN1-206ENST00000544964 HELBQ8NG08 1087 aaPredicted RBP15.68■□□□□ 0.1
ACTN1-206ENST00000544964 TNRC18O15417 2968 aaPredicted RBP15.68■□□□□ 0.1
ACTN1-206ENST00000544964 UBE2Q2LH0YL09 131 aa15.67■□□□□ 0.1
ACTN1-206ENST00000544964 PLIN1O60240 522 aa15.67■□□□□ 0.1
ACTN1-206ENST00000544964 TRIM27P14373 513 aa15.67■□□□□ 0.1
ACTN1-206ENST00000544964 RGS19P49795 217 aa15.67■□□□□ 0.1
ACTN1-206ENST00000544964 MMP14P50281 582 aa15.67■□□□□ 0.1
ACTN1-206ENST00000544964 LMBR1LQ6UX01 489 aa15.67■□□□□ 0.1
ACTN1-206ENST00000544964 ATF7IPQ6VMQ6 1270 aa15.67■□□□□ 0.1
ACTN1-206ENST00000544964 ARHGAP45Q92619 1136 aa15.67■□□□□ 0.1
ACTN1-206ENST00000544964 CLUAP1Q96AJ1 413 aa15.67■□□□□ 0.1
ACTN1-206ENST00000544964 ZNF594Q96JF6 807 aaPredicted RBP15.67■□□□□ 0.1
ACTN1-206ENST00000544964 CHMP3Q9Y3E7 222 aa15.67■□□□□ 0.1
ACTN1-206ENST00000544964 OTOFQ9HC10 1997 aa15.67■□□□□ 0.1
ACTN1-206ENST00000544964 IL1R1P14778 569 aa15.66■□□□□ 0.1
ACTN1-206ENST00000544964 APOBEC3FQ8IUX4 373 aaKnown RBP15.66■□□□□ 0.1
ACTN1-206ENST00000544964 KAZALD1Q96I82 304 aa15.66■□□□□ 0.1
ACTN1-206ENST00000544964 PCDHAC2Q9Y5I4 1007 aa15.66■□□□□ 0.1
ACTN1-206ENST00000544964 AOX1Q06278 1338 aa15.66■□□□□ 0.1
ACTN1-206ENST00000544964 HTTP42858 3142 aa15.65■□□□□ 0.1
ACTN1-206ENST00000544964 HDAC9Q9UKV0 1011 aa15.65■□□□□ 0.1
ACTN1-206ENST00000544964 ALDH1L1O75891 902 aa15.64■□□□□ 0.09
ACTN1-206ENST00000544964 ZNF804AQ7Z570 1209 aa15.64■□□□□ 0.09
ACTN1-206ENST00000544964 REM2Q8IYK8 340 aaPredicted RBP15.64■□□□□ 0.09
ACTN1-206ENST00000544964 MTMR14Q8NCE2 650 aa15.64■□□□□ 0.09
ACTN1-206ENST00000544964 SUCLG2Q96I99 432 aa15.64■□□□□ 0.09
ACTN1-206ENST00000544964 SRCIN1Q9C0H9 1055 aa15.64■□□□□ 0.09
ACTN1-206ENST00000544964 FKBP1AP62942 108 aaKnown RBP15.63■□□□□ 0.09
ACTN1-206ENST00000544964 TTLL12Q14166 644 aaPredicted RBP15.63■□□□□ 0.09
ACTN1-206ENST00000544964 CCDC57Q2TAC2 916 aa15.63■□□□□ 0.09
ACTN1-206ENST00000544964 JAG2Q9Y219 1238 aa15.63■□□□□ 0.09
ACTN1-206ENST00000544964 UTYO14607 1347 aa15.63■□□□□ 0.09
ACTN1-206ENST00000544964 SPDYE2BA6NHP3 402 aa15.62■□□□□ 0.09
ACTN1-206ENST00000544964 NBPF7P0C2Y1 421 aaPredicted RBP15.62■□□□□ 0.09
ACTN1-206ENST00000544964 SPDYE6P0CI01 402 aa15.62■□□□□ 0.09
ACTN1-206ENST00000544964 RLBP1P12271 317 aa15.62■□□□□ 0.09
ACTN1-206ENST00000544964 NF2P35240 595 aa15.62■□□□□ 0.09
ACTN1-206ENST00000544964 PTPN12Q05209 780 aaKnown RBP15.62■□□□□ 0.09
ACTN1-206ENST00000544964 DLGAP5Q15398 846 aa15.62■□□□□ 0.09
ACTN1-206ENST00000544964 LDHAL6AQ6ZMR3 332 aa15.62■□□□□ 0.09
ACTN1-206ENST00000544964 DZIP1LQ8IYY4 767 aaKnown RBP15.62■□□□□ 0.09
ACTN1-206ENST00000544964 PANK1Q8TE04 598 aa15.62■□□□□ 0.09
ACTN1-206ENST00000544964 DEFB129Q9H1M3 183 aa15.62■□□□□ 0.09
ACTN1-206ENST00000544964 C9orf78Q9NZ63 289 aaPredicted RBP15.62■□□□□ 0.09
ACTN1-206ENST00000544964 FZD1Q9UP38 647 aa15.62■□□□□ 0.09
ACTN1-206ENST00000544964 F8W031 263 aaPredicted RBP15.61■□□□□ 0.09
ACTN1-206ENST00000544964 RRP1P56182 461 aaKnown RBP15.61■□□□□ 0.09
ACTN1-206ENST00000544964 MLLT1Q03111 559 aaPredicted RBP15.61■□□□□ 0.09
ACTN1-206ENST00000544964 MKRN3Q13064 507 aaKnown RBP15.61■□□□□ 0.09
ACTN1-206ENST00000544964 PRKG1Q13976 671 aa15.61■□□□□ 0.09
ACTN1-206ENST00000544964 TAF7LQ5H9L4 462 aa15.61■□□□□ 0.09
ACTN1-206ENST00000544964 LDLRAD1Q5T700 205 aa15.61■□□□□ 0.09
ACTN1-206ENST00000544964 FTSJ3Q8IY81 847 aaKnown RBP15.61■□□□□ 0.09
ACTN1-206ENST00000544964 TMEM57Q8N5G2 664 aa15.61■□□□□ 0.09
ACTN1-206ENST00000544964 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.61■□□□□ 0.09
ACTN1-206ENST00000544964 PUS3Q9BZE2 481 aaKnown RBP15.61■□□□□ 0.09
ACTN1-206ENST00000544964 CNNM1Q9NRU3 951 aa15.61■□□□□ 0.09
ACTN1-206ENST00000544964 FAM205AQ6ZU69 1335 aa15.61■□□□□ 0.09
ACTN1-206ENST00000544964 TM4SF4P48230 202 aa15.6■□□□□ 0.09
ACTN1-206ENST00000544964 RABL6Q3YEC7 729 aaPredicted RBP15.6■□□□□ 0.09
ACTN1-206ENST00000544964 CFAP100Q494V2 611 aa15.6■□□□□ 0.09
ACTN1-206ENST00000544964 C20orf194Q5TEA3 1177 aa15.6■□□□□ 0.09
ACTN1-206ENST00000544964 INTS3Q68E01 1043 aaKnown RBP15.6■□□□□ 0.09
ACTN1-206ENST00000544964 ARMC9Q7Z3E5 817 aa15.6■□□□□ 0.09
ACTN1-206ENST00000544964 CTU1Q7Z7A3 348 aaKnown RBP15.6■□□□□ 0.09
ACTN1-206ENST00000544964 SUPT16HQ9Y5B9 1047 aaKnown RBP15.6■□□□□ 0.09
ACTN1-206ENST00000544964 MYH13Q9UKX3 1938 aa15.59■□□□□ 0.09
ACTN1-206ENST00000544964 CLRN2A0PK11 232 aa15.59■□□□□ 0.09
ACTN1-206ENST00000544964 TBC1D8O95759 1140 aa15.59■□□□□ 0.09
ACTN1-206ENST00000544964 MAP3K11Q16584 847 aa15.59■□□□□ 0.09
ACTN1-206ENST00000544964 ANKRD44Q8N8A2 993 aa15.59■□□□□ 0.09
ACTN1-206ENST00000544964 TDRD7Q8NHU6 1098 aaKnown RBP15.59■□□□□ 0.09
ACTN1-206ENST00000544964 ZNF296Q8WUU4 475 aaPredicted RBP15.59■□□□□ 0.09
ACTN1-206ENST00000544964 PRMT6Q96LA8 375 aaPredicted RBP15.59■□□□□ 0.09
ACTN1-206ENST00000544964 BICC1Q9H694 974 aaKnown RBP15.59■□□□□ 0.09
ACTN1-206ENST00000544964 ANGEL1Q9UNK9 670 aaKnown RBP15.59■□□□□ 0.09
ACTN1-206ENST00000544964 PPP2R3BQ9Y5P8 575 aa15.59■□□□□ 0.09
ACTN1-206ENST00000544964 MS4A1P11836 297 aa15.58■□□□□ 0.08
ACTN1-206ENST00000544964 GYG1P46976 350 aa15.58■□□□□ 0.08
ACTN1-206ENST00000544964 UBE4AQ14139 1066 aa15.58■□□□□ 0.08
ACTN1-206ENST00000544964 SPRYD7Q5W111 196 aa15.58■□□□□ 0.08
ACTN1-206ENST00000544964 CLMNQ96JQ2 1002 aa15.58■□□□□ 0.08
ACTN1-206ENST00000544964 FAM84BQ96KN1 310 aaPredicted RBP15.58■□□□□ 0.08
ACTN1-206ENST00000544964 RIPOR2Q9Y4F9 1068 aa15.58■□□□□ 0.08
ACTN1-206ENST00000544964 NOM1Q5C9Z4 860 aaKnown RBP15.57■□□□□ 0.08
ACTN1-206ENST00000544964 MFSD14BQ5SR56 506 aa15.57■□□□□ 0.08
ACTN1-206ENST00000544964 ITPRIPQ8IWB1 547 aa15.57■□□□□ 0.08
ACTN1-206ENST00000544964 VGLL2Q8N8G2 317 aa15.57■□□□□ 0.08
ACTN1-206ENST00000544964 CFHR5Q9BXR6 569 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms