RNA–Protein interactions for RNA: ENST00000544800.1

CIT-215, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-215ENST00000544800 TAF1P21675 1872 aa9.41□□□□□ -0.9
CIT-215ENST00000544800 MYPNQ86TC9 1320 aa9.41□□□□□ -0.9
CIT-215ENST00000544800 ZNF790Q6PG37 636 aa9.41□□□□□ -0.9
CIT-215ENST00000544800 PLCD3Q8N3E9 789 aa9.41□□□□□ -0.9
CIT-215ENST00000544800 BRI3BPQ8WY22 251 aa9.41□□□□□ -0.9
CIT-215ENST00000544800 GMLQ99445 158 aa9.41□□□□□ -0.9
CIT-215ENST00000544800 C11orf49Q9H6J7 331 aa9.41□□□□□ -0.9
CIT-215ENST00000544800 FZD1Q9UP38 647 aa9.41□□□□□ -0.9
CIT-215ENST00000544800 ADGRA2Q96PE1 1338 aa9.4□□□□□ -0.9
CIT-215ENST00000544800 FAM86C2PA6NEL3 165 aa9.4□□□□□ -0.9
CIT-215ENST00000544800 ATMINO43313 823 aaPredicted RBP9.4□□□□□ -0.9
CIT-215ENST00000544800 CTGFP29279 349 aa9.4□□□□□ -0.9
CIT-215ENST00000544800 PIP4K2AP48426 406 aaPredicted RBP9.4□□□□□ -0.9
CIT-215ENST00000544800 GRIN2CQ14957 1233 aa9.4□□□□□ -0.9
CIT-215ENST00000544800 AKNAD1Q5T1N1 836 aa9.4□□□□□ -0.9
CIT-215ENST00000544800 TMC4Q7Z404 712 aa9.4□□□□□ -0.9
CIT-215ENST00000544800 FAM43AQ8N2R8 423 aa9.4□□□□□ -0.9
CIT-215ENST00000544800 FMNL2Q96PY5 1086 aa9.4□□□□□ -0.9
CIT-215ENST00000544800 EYA3Q99504 573 aa9.4□□□□□ -0.9
CIT-215ENST00000544800 CCL15-CCL14A0A0B4J2E2 113 aa9.39□□□□□ -0.91
CIT-215ENST00000544800 PRR33A8MZF0 331 aa9.39□□□□□ -0.91
CIT-215ENST00000544800 C6orf229H3BNL8 230 aa9.39□□□□□ -0.91
CIT-215ENST00000544800 WNT10BO00744 389 aa9.39□□□□□ -0.91
CIT-215ENST00000544800 GTF2A2P52657 109 aa9.39□□□□□ -0.91
CIT-215ENST00000544800 CCL15Q16663 113 aa9.39□□□□□ -0.91
CIT-215ENST00000544800 ASTLQ6HA08 431 aaPredicted RBP9.39□□□□□ -0.91
CIT-215ENST00000544800 ERMP1Q7Z2K6 904 aa9.39□□□□□ -0.91
CIT-215ENST00000544800 APOBEC3FQ8IUX4 373 aaKnown RBP9.39□□□□□ -0.91
CIT-215ENST00000544800 AEBP1Q8IUX7 1158 aa9.39□□□□□ -0.91
CIT-215ENST00000544800 KIF12Q96FN5 646 aa9.39□□□□□ -0.91
CIT-215ENST00000544800 FBXL18Q96ME1 805 aa9.39□□□□□ -0.91
CIT-215ENST00000544800 ZCCHC17Q9NP64 241 aaKnown RBP9.39□□□□□ -0.91
CIT-215ENST00000544800 METRNQ9UJH8 293 aa9.39□□□□□ -0.91
CIT-215ENST00000544800 USP16Q9Y5T5 823 aa9.39□□□□□ -0.91
CIT-215ENST00000544800 LAMB1P07942 1786 aa9.39□□□□□ -0.91
CIT-215ENST00000544800 IBTKQ9P2D0 1353 aaPredicted RBP9.38□□□□□ -0.91
CIT-215ENST00000544800 ADCY3O60266 1144 aa9.38□□□□□ -0.91
CIT-215ENST00000544800 INHAP05111 366 aa9.38□□□□□ -0.91
CIT-215ENST00000544800 IREB2P48200 963 aaKnown RBP9.38□□□□□ -0.91
CIT-215ENST00000544800 AAK1Q2M2I8 961 aa9.38□□□□□ -0.91
CIT-215ENST00000544800 POTEEQ6S8J3 1075 aa9.38□□□□□ -0.91
CIT-215ENST00000544800 C17orf99Q6UX52 265 aa9.38□□□□□ -0.91
CIT-215ENST00000544800 ANKRD13AQ8IZ07 590 aa9.38□□□□□ -0.91
CIT-215ENST00000544800 OPTNQ96CV9 577 aa9.38□□□□□ -0.91
CIT-215ENST00000544800 CXXC1Q9P0U4 656 aaPredicted RBP9.38□□□□□ -0.91
CIT-215ENST00000544800 NSFL1CQ9UNZ2 370 aaKnown RBP9.38□□□□□ -0.91
CIT-215ENST00000544800 TRPC6Q9Y210 931 aa9.38□□□□□ -0.91
CIT-215ENST00000544800 UBR2Q8IWV8 1755 aa9.37□□□□□ -0.91
CIT-215ENST00000544800 G3V3G9 751 aa9.37□□□□□ -0.91
CIT-215ENST00000544800 ITGB8P26012 769 aa9.37□□□□□ -0.91
CIT-215ENST00000544800 PRKCZQ05513 592 aa9.37□□□□□ -0.91
CIT-215ENST00000544800 PDE3AQ14432 1141 aa9.37□□□□□ -0.91
CIT-215ENST00000544800 SHHQ15465 462 aa9.37□□□□□ -0.91
CIT-215ENST00000544800 SLC10A5Q5PT55 438 aa9.37□□□□□ -0.91
CIT-215ENST00000544800 DCAF8Q5TAQ9 597 aa9.37□□□□□ -0.91
CIT-215ENST00000544800 SUSD4Q5VX71 490 aa9.37□□□□□ -0.91
CIT-215ENST00000544800 PXYLP1Q8TE99 480 aa9.37□□□□□ -0.91
CIT-215ENST00000544800 GAS2L1Q99501 681 aaPredicted RBP9.37□□□□□ -0.91
CIT-215ENST00000544800 POLLQ9UGP5 575 aa9.37□□□□□ -0.91
CIT-215ENST00000544800 ERVV-1B6SEH8 477 aa9.36□□□□□ -0.91
CIT-215ENST00000544800 PI4K2BG5E9Z4 385 aa9.36□□□□□ -0.91
CIT-215ENST00000544800 MAP3K13O43283 966 aa9.36□□□□□ -0.91
CIT-215ENST00000544800 SLC24A1O60721 1099 aa9.36□□□□□ -0.91
CIT-215ENST00000544800 ATN1P54259 1190 aaPredicted RBP9.36□□□□□ -0.91
CIT-215ENST00000544800 GRAPQ13588 217 aa9.36□□□□□ -0.91
CIT-215ENST00000544800 SUPT20HL1Q3ZLR7 823 aa9.36□□□□□ -0.91
CIT-215ENST00000544800 SULT6B1Q6IMI4 303 aa9.36□□□□□ -0.91
CIT-215ENST00000544800 DDX46Q7L014 1031 aaKnown RBP9.36□□□□□ -0.91
CIT-215ENST00000544800 OGFOD1Q8N543 542 aa9.36□□□□□ -0.91
CIT-215ENST00000544800 GRAPLQ8TC17 118 aaPredicted RBP9.36□□□□□ -0.91
CIT-215ENST00000544800 L3MBTL2Q969R5 705 aa9.36□□□□□ -0.91
CIT-215ENST00000544800 ZC3H12CQ9C0D7 883 aaKnown RBP9.36□□□□□ -0.91
CIT-215ENST00000544800 IGSF5Q9NSI5 407 aa9.36□□□□□ -0.91
CIT-215ENST00000544800 USP34Q70CQ2 3546 aa9.36□□□□□ -0.91
CIT-215ENST00000544800 ZSWIM8A7E2V4 1837 aa9.35□□□□□ -0.91
CIT-215ENST00000544800 NTSR2O95665 410 aa9.35□□□□□ -0.91
CIT-215ENST00000544800 MMP14P50281 582 aa9.35□□□□□ -0.91
CIT-215ENST00000544800 PPP1R42Q7Z4L9 355 aa9.35□□□□□ -0.91
CIT-215ENST00000544800 DEFB129Q9H1M3 183 aa9.35□□□□□ -0.91
CIT-215ENST00000544800 DUOX1Q9NRD9 1551 aa9.35□□□□□ -0.91
CIT-215ENST00000544800 KMT2BQ9UMN6 2715 aaPredicted RBP9.35□□□□□ -0.91
CIT-215ENST00000544800 UNC79Q9P2D8 2635 aa9.35□□□□□ -0.91
CIT-215ENST00000544800 USP2O75604 605 aaPredicted RBP9.34□□□□□ -0.91
CIT-215ENST00000544800 ELNP15502 786 aa9.34□□□□□ -0.91
CIT-215ENST00000544800 KCTD2Q14681 263 aa9.34□□□□□ -0.91
CIT-215ENST00000544800 UIMC1Q96RL1 719 aa9.34□□□□□ -0.91
CIT-215ENST00000544800 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.34□□□□□ -0.91
CIT-215ENST00000544800 ELP3Q9H9T3 547 aa9.34□□□□□ -0.91
CIT-215ENST00000544800 CPA4Q9UI42 421 aa9.34□□□□□ -0.91
CIT-215ENST00000544800 COL3A1P02461 1466 aaPredicted RBP9.34□□□□□ -0.91
CIT-215ENST00000544800 PFASO15067 1338 aa9.33□□□□□ -0.92
CIT-215ENST00000544800 UBN2Q6ZU65 1347 aa9.33□□□□□ -0.92
CIT-215ENST00000544800 PTPRZ1P23471 2315 aaPredicted RBP9.33□□□□□ -0.92
CIT-215ENST00000544800 CETPP11597 493 aa9.33□□□□□ -0.92
CIT-215ENST00000544800 GPTP24298 496 aa9.33□□□□□ -0.92
CIT-215ENST00000544800 FCGRTP55899 365 aa9.33□□□□□ -0.92
CIT-215ENST00000544800 TEFQ10587 303 aa9.33□□□□□ -0.92
CIT-215ENST00000544800 CCDC85BQ15834 202 aaPredicted RBP9.33□□□□□ -0.92
CIT-215ENST00000544800 C9orf50Q5SZB4 431 aa9.33□□□□□ -0.92
CIT-215ENST00000544800 NBPF10Q6P3W6 841 aaKnown RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms