RNA–Protein interactions for RNA: ENST00000544622.4

YBX3-216, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-216ENST00000544622 BCAMP50895 628 aa14.23□□□□□ -0.13
YBX3-216ENST00000544622 NBPF9Q3BBW0 867 aa14.23□□□□□ -0.13
YBX3-216ENST00000544622 CAVIN4Q5BKX8 364 aa14.23□□□□□ -0.13
YBX3-216ENST00000544622 DLK2Q6UY11 383 aa14.23□□□□□ -0.13
YBX3-216ENST00000544622 FTSJ3Q8IY81 847 aaKnown RBP14.23□□□□□ -0.13
YBX3-216ENST00000544622 MTMR14Q8NCE2 650 aa14.23□□□□□ -0.13
YBX3-216ENST00000544622 IFIT1P09914 478 aaKnown RBP14.22□□□□□ -0.13
YBX3-216ENST00000544622 ATP8B2P98198 1209 aa14.22□□□□□ -0.13
YBX3-216ENST00000544622 POLA2Q14181 598 aa14.22□□□□□ -0.13
YBX3-216ENST00000544622 ANGEL2Q5VTE6 544 aaKnown RBP14.22□□□□□ -0.13
YBX3-216ENST00000544622 KRT26Q7Z3Y9 468 aa14.22□□□□□ -0.13
YBX3-216ENST00000544622 SSH3Q8TE77 659 aa14.22□□□□□ -0.13
YBX3-216ENST00000544622 FBXW7Q969H0 707 aa14.22□□□□□ -0.13
YBX3-216ENST00000544622 DCPSQ96C86 337 aaKnown RBP14.22□□□□□ -0.13
YBX3-216ENST00000544622 GGA3Q9NZ52 723 aa14.22□□□□□ -0.13
YBX3-216ENST00000544622 CEP126Q9P2H0 1117 aa14.22□□□□□ -0.13
YBX3-216ENST00000544622 RCAN3Q9UKA8 241 aa14.22□□□□□ -0.13
YBX3-216ENST00000544622 TLL2Q9Y6L7 1015 aa14.22□□□□□ -0.13
YBX3-216ENST00000544622 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.22□□□□□ -0.13
YBX3-216ENST00000544622 SAPCD2Q86UD0 394 aa14.21□□□□□ -0.13
YBX3-216ENST00000544622 ITPRIPQ8IWB1 547 aa14.21□□□□□ -0.13
YBX3-216ENST00000544622 PANK1Q8TE04 598 aa14.21□□□□□ -0.13
YBX3-216ENST00000544622 MKRN1Q9UHC7 482 aaKnown RBP14.21□□□□□ -0.13
YBX3-216ENST00000544622 HDAC9Q9UKV0 1011 aa14.21□□□□□ -0.13
YBX3-216ENST00000544622 JAG2Q9Y219 1238 aa14.21□□□□□ -0.13
YBX3-216ENST00000544622 ADM5C9JUS6 153 aa14.2□□□□□ -0.14
YBX3-216ENST00000544622 CELF2O95319 508 aaKnown RBP14.2□□□□□ -0.14
YBX3-216ENST00000544622 SLC5A1P13866 664 aa14.2□□□□□ -0.14
YBX3-216ENST00000544622 DEFB115Q30KQ5 88 aa14.2□□□□□ -0.14
YBX3-216ENST00000544622 MFSD14BQ5SR56 506 aa14.2□□□□□ -0.14
YBX3-216ENST00000544622 HHIPL1Q96JK4 782 aa14.2□□□□□ -0.14
YBX3-216ENST00000544622 POLR2AP24928 1970 aaKnown RBP14.2□□□□□ -0.14
YBX3-216ENST00000544622 TRPM7Q96QT4 1865 aa14.19□□□□□ -0.14
YBX3-216ENST00000544622 MS4A1P11836 297 aa14.19□□□□□ -0.14
YBX3-216ENST00000544622 VEGFBP49765 207 aa14.19□□□□□ -0.14
YBX3-216ENST00000544622 GRIK5Q16478 980 aa14.19□□□□□ -0.14
YBX3-216ENST00000544622 ATP2B3Q16720 1220 aa14.19□□□□□ -0.14
YBX3-216ENST00000544622 VPS37DQ86XT2 251 aa14.19□□□□□ -0.14
YBX3-216ENST00000544622 SULF1Q8IWU6 871 aa14.19□□□□□ -0.14
YBX3-216ENST00000544622 PRMT6Q96LA8 375 aaPredicted RBP14.19□□□□□ -0.14
YBX3-216ENST00000544622 MRIQ9BWK5 157 aa14.19□□□□□ -0.14
YBX3-216ENST00000544622 IQSEC3Q9UPP2 1182 aaPredicted RBP14.19□□□□□ -0.14
YBX3-216ENST00000544622 PCDHAC2Q9Y5I4 1007 aa14.19□□□□□ -0.14
YBX3-216ENST00000544622 SPDYE2BA6NHP3 402 aa14.18□□□□□ -0.14
YBX3-216ENST00000544622 SPDYE6P0CI01 402 aa14.18□□□□□ -0.14
YBX3-216ENST00000544622 TIMM10P62072 90 aa14.18□□□□□ -0.14
YBX3-216ENST00000544622 TFCP2Q12800 502 aa14.18□□□□□ -0.14
YBX3-216ENST00000544622 MVPQ14764 893 aaKnown RBP14.18□□□□□ -0.14
YBX3-216ENST00000544622 TBC1D22AQ8WUA7 517 aa14.18□□□□□ -0.14
YBX3-216ENST00000544622 C1orf115Q9H7X2 142 aa14.18□□□□□ -0.14
YBX3-216ENST00000544622 SERPINA10Q9UK55 444 aa14.18□□□□□ -0.14
YBX3-216ENST00000544622 ABT1Q9ULW3 272 aaKnown RBP14.18□□□□□ -0.14
YBX3-216ENST00000544622 A0A1B0GUL7 405 aa14.17□□□□□ -0.14
YBX3-216ENST00000544622 F8W031 263 aaPredicted RBP14.17□□□□□ -0.14
YBX3-216ENST00000544622 DLGAP5Q15398 846 aa14.17□□□□□ -0.14
YBX3-216ENST00000544622 CFAP100Q494V2 611 aa14.17□□□□□ -0.14
YBX3-216ENST00000544622 CEP85Q6P2H3 762 aa14.17□□□□□ -0.14
YBX3-216ENST00000544622 CDCA5Q96FF9 252 aa14.17□□□□□ -0.14
YBX3-216ENST00000544622 ZBTB40Q9NUA8 1239 aa14.17□□□□□ -0.14
YBX3-216ENST00000544622 TTF2Q9UNY4 1162 aaKnown RBP14.17□□□□□ -0.14
YBX3-216ENST00000544622 SCAF8Q9UPN6 1271 aaKnown RBP14.17□□□□□ -0.14
YBX3-216ENST00000544622 NOP58Q9Y2X3 529 aaKnown RBP14.17□□□□□ -0.14
YBX3-216ENST00000544622 SUGT1Q9Y2Z0 365 aa14.17□□□□□ -0.14
YBX3-216ENST00000544622 AOX1Q06278 1338 aa14.16□□□□□ -0.14
YBX3-216ENST00000544622 WDR33Q9C0J8 1336 aaKnown RBP14.16□□□□□ -0.14
YBX3-216ENST00000544622 ADORA1P30542 326 aa14.16□□□□□ -0.14
YBX3-216ENST00000544622 HDLBPQ00341 1268 aaKnown RBP14.16□□□□□ -0.14
YBX3-216ENST00000544622 PDE3AQ14432 1141 aa14.16□□□□□ -0.14
YBX3-216ENST00000544622 CCDC102BQ68D86 513 aa14.16□□□□□ -0.14
YBX3-216ENST00000544622 ZNF408Q9H9D4 720 aa14.16□□□□□ -0.14
YBX3-216ENST00000544622 AKAP2Q9Y2D5 859 aa14.16□□□□□ -0.14
YBX3-216ENST00000544622 COL1A1P02452 1464 aaPredicted RBP14.16□□□□□ -0.14
YBX3-216ENST00000544622 SEMA3EO15041 775 aa14.15□□□□□ -0.14
YBX3-216ENST00000544622 FRAT2O75474 233 aaPredicted RBP14.15□□□□□ -0.14
YBX3-216ENST00000544622 PHKA1P46020 1223 aa14.15□□□□□ -0.14
YBX3-216ENST00000544622 CHAF1AQ13111 956 aaPredicted RBP14.15□□□□□ -0.14
YBX3-216ENST00000544622 G3BP1Q13283 466 aaKnown RBP eCLIP14.15□□□□□ -0.14
YBX3-216ENST00000544622 XAGE2Q96GT9 111 aa14.15□□□□□ -0.14
YBX3-216ENST00000544622 GBA2Q9HCG7 927 aaPredicted RBP14.15□□□□□ -0.14
YBX3-216ENST00000544622 DDX19BQ9UMR2 479 aa14.15□□□□□ -0.14
YBX3-216ENST00000544622 COG6Q9Y2V7 657 aa14.15□□□□□ -0.14
YBX3-216ENST00000544622 SALL1Q9NSC2 1324 aa14.15□□□□□ -0.15
YBX3-216ENST00000544622 CRKP46108 304 aa14.14□□□□□ -0.15
YBX3-216ENST00000544622 C20orf194Q5TEA3 1177 aa14.14□□□□□ -0.15
YBX3-216ENST00000544622 CYP4F22Q6NT55 531 aa14.14□□□□□ -0.15
YBX3-216ENST00000544622 WDR66Q8TBY9 1149 aa14.14□□□□□ -0.15
YBX3-216ENST00000544622 CAPNS2Q96L46 248 aa14.14□□□□□ -0.15
YBX3-216ENST00000544622 GPR108Q9NPR9 543 aa14.14□□□□□ -0.15
YBX3-216ENST00000544622 ARAP2Q8WZ64 1704 aa14.14□□□□□ -0.15
YBX3-216ENST00000544622 PDS5AQ29RF7 1337 aaKnown RBP14.14□□□□□ -0.15
YBX3-216ENST00000544622 SURF6O75683 361 aaKnown RBP14.13□□□□□ -0.15
YBX3-216ENST00000544622 FKBP1BP68106 108 aa14.13□□□□□ -0.15
YBX3-216ENST00000544622 PRAMEF18Q5VWM3 479 aa14.13□□□□□ -0.15
YBX3-216ENST00000544622 APOBEC3FQ8IUX4 373 aaKnown RBP14.13□□□□□ -0.15
YBX3-216ENST00000544622 SIRT2Q8IXJ6 389 aa14.13□□□□□ -0.15
YBX3-216ENST00000544622 C2orf69Q8N8R5 385 aa14.13□□□□□ -0.15
YBX3-216ENST00000544622 DEFB129Q9H1M3 183 aa14.13□□□□□ -0.15
YBX3-216ENST00000544622 GNL3LQ9NVN8 582 aaKnown RBP14.13□□□□□ -0.15
YBX3-216ENST00000544622 DENND2AQ9ULE3 1009 aa14.13□□□□□ -0.15
YBX3-216ENST00000544622 MYO1BO43795 1136 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms