RNA–Protein interactions for RNA: ENST00000544588.1

CIT-214, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-214ENST00000544588 SIL1Q9H173 461 aa16.44■□□□□ 0.22
CIT-214ENST00000544588 IQSEC3Q9UPP2 1182 aaPredicted RBP16.44■□□□□ 0.22
CIT-214ENST00000544588 EYA2O00167 538 aa16.43■□□□□ 0.22
CIT-214ENST00000544588 CAPN15O75808 1086 aa16.43■□□□□ 0.22
CIT-214ENST00000544588 IFIT1P09914 478 aaKnown RBP16.43■□□□□ 0.22
CIT-214ENST00000544588 MMP14P50281 582 aa16.43■□□□□ 0.22
CIT-214ENST00000544588 CHAF1AQ13111 956 aaPredicted RBP16.43■□□□□ 0.22
CIT-214ENST00000544588 TTLL12Q14166 644 aaPredicted RBP16.43■□□□□ 0.22
CIT-214ENST00000544588 CERS5Q8N5B7 392 aa16.43■□□□□ 0.22
CIT-214ENST00000544588 WBP1LQ9NX94 342 aa16.43■□□□□ 0.22
CIT-214ENST00000544588 RFX5P48382 616 aaPredicted RBP16.42■□□□□ 0.22
CIT-214ENST00000544588 CTCFP49711 727 aaPredicted RBP16.42■□□□□ 0.22
CIT-214ENST00000544588 ZNF157P51786 506 aaPredicted RBP16.42■□□□□ 0.22
CIT-214ENST00000544588 PTPN12Q05209 780 aaKnown RBP16.42■□□□□ 0.22
CIT-214ENST00000544588 CFAP100Q494V2 611 aa16.42■□□□□ 0.22
CIT-214ENST00000544588 MFSD14BQ5SR56 506 aa16.42■□□□□ 0.22
CIT-214ENST00000544588 ATF7IPQ6VMQ6 1270 aa16.42■□□□□ 0.22
CIT-214ENST00000544588 TDRD7Q8NHU6 1098 aaKnown RBP16.42■□□□□ 0.22
CIT-214ENST00000544588 TNNQ9UQP3 1299 aa16.42■□□□□ 0.22
CIT-214ENST00000544588 ZNF609O15014 1411 aa16.42■□□□□ 0.22
CIT-214ENST00000544588 PITPNM2Q9BZ72 1349 aa16.42■□□□□ 0.22
CIT-214ENST00000544588 GNAI3P08754 354 aa16.41■□□□□ 0.22
CIT-214ENST00000544588 TRIM27P14373 513 aa16.41■□□□□ 0.22
CIT-214ENST00000544588 NF2P35240 595 aa16.41■□□□□ 0.22
CIT-214ENST00000544588 MAP2K2P36507 400 aa16.41■□□□□ 0.22
CIT-214ENST00000544588 BCAMP50895 628 aa16.41■□□□□ 0.22
CIT-214ENST00000544588 PUM3Q15397 648 aaKnown RBP16.41■□□□□ 0.22
CIT-214ENST00000544588 INTS3Q68E01 1043 aaKnown RBP16.41■□□□□ 0.22
CIT-214ENST00000544588 RGMBQ6NW40 437 aa16.41■□□□□ 0.22
CIT-214ENST00000544588 FBXO33Q7Z6M2 555 aa16.41■□□□□ 0.22
CIT-214ENST00000544588 TNS4Q8IZW8 715 aa16.41■□□□□ 0.22
CIT-214ENST00000544588 HHIPL1Q96JK4 782 aa16.41■□□□□ 0.22
CIT-214ENST00000544588 MYO1BO43795 1136 aa16.4■□□□□ 0.22
CIT-214ENST00000544588 SLC5A1P13866 664 aa16.4■□□□□ 0.22
CIT-214ENST00000544588 LBX1P52954 281 aa16.4■□□□□ 0.22
CIT-214ENST00000544588 FKBP1AP62942 108 aaKnown RBP16.4■□□□□ 0.22
CIT-214ENST00000544588 ZKSCAN2Q63HK3 967 aa16.4■□□□□ 0.22
CIT-214ENST00000544588 APOBEC3FQ8IUX4 373 aaKnown RBP16.4■□□□□ 0.22
CIT-214ENST00000544588 VEZTQ9HBM0 779 aa16.4■□□□□ 0.22
CIT-214ENST00000544588 CEP126Q9P2H0 1117 aa16.4■□□□□ 0.22
CIT-214ENST00000544588 TTF2Q9UNY4 1162 aaKnown RBP16.4■□□□□ 0.22
CIT-214ENST00000544588 PA2G4Q9UQ80 394 aaKnown RBP16.4■□□□□ 0.22
CIT-214ENST00000544588 PCDHAC2Q9Y5I4 1007 aa16.4■□□□□ 0.22
CIT-214ENST00000544588 CACNA1FO60840 1977 aa16.39■□□□□ 0.21
CIT-214ENST00000544588 CLRN2A0PK11 232 aa16.39■□□□□ 0.21
CIT-214ENST00000544588 PRKG1Q13976 671 aa16.39■□□□□ 0.21
CIT-214ENST00000544588 VGLL2Q8N8G2 317 aa16.39■□□□□ 0.21
CIT-214ENST00000544588 CCDC102AQ96A19 550 aa16.39■□□□□ 0.21
CIT-214ENST00000544588 FAM205AQ6ZU69 1335 aa16.39■□□□□ 0.21
CIT-214ENST00000544588 NOGQ13253 232 aa16.38■□□□□ 0.21
CIT-214ENST00000544588 MOB2Q70IA6 237 aa16.38■□□□□ 0.21
CIT-214ENST00000544588 FTSJ3Q8IY81 847 aaKnown RBP16.38■□□□□ 0.21
CIT-214ENST00000544588 LPIN2Q92539 896 aa16.38■□□□□ 0.21
CIT-214ENST00000544588 PRMT6Q96LA8 375 aaPredicted RBP16.38■□□□□ 0.21
CIT-214ENST00000544588 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.38■□□□□ 0.21
CIT-214ENST00000544588 SCN9AQ15858 1988 aa16.37■□□□□ 0.21
CIT-214ENST00000544588 UBE2Q2LH0YL09 131 aa16.37■□□□□ 0.21
CIT-214ENST00000544588 SRGAP3O43295 1099 aa16.37■□□□□ 0.21
CIT-214ENST00000544588 CIAO1O76071 339 aa16.37■□□□□ 0.21
CIT-214ENST00000544588 GNAI2P04899 355 aa16.37■□□□□ 0.21
CIT-214ENST00000544588 ATG9AQ7Z3C6 839 aa16.37■□□□□ 0.21
CIT-214ENST00000544588 TMEM57Q8N5G2 664 aa16.37■□□□□ 0.21
CIT-214ENST00000544588 ZBED3Q96IU2 234 aaPredicted RBP16.37■□□□□ 0.21
CIT-214ENST00000544588 ZIC5Q96T25 663 aa16.37■□□□□ 0.21
CIT-214ENST00000544588 DEFB129Q9H1M3 183 aa16.37■□□□□ 0.21
CIT-214ENST00000544588 TSKSQ9UJT2 592 aa16.37■□□□□ 0.21
CIT-214ENST00000544588 ZBED9Q6R2W3 1325 aa16.37■□□□□ 0.21
CIT-214ENST00000544588 SPDYE2BA6NHP3 402 aa16.36■□□□□ 0.21
CIT-214ENST00000544588 SPDYE6P0CI01 402 aa16.36■□□□□ 0.21
CIT-214ENST00000544588 FGFR2P21802 821 aa16.36■□□□□ 0.21
CIT-214ENST00000544588 IL15P40933 162 aaPredicted RBP16.36■□□□□ 0.21
CIT-214ENST00000544588 FKBP1BP68106 108 aa16.36■□□□□ 0.21
CIT-214ENST00000544588 ATP2B3Q16720 1220 aa16.36■□□□□ 0.21
CIT-214ENST00000544588 MTMR14Q8NCE2 650 aa16.36■□□□□ 0.21
CIT-214ENST00000544588 TBC1D22AQ8WUA7 517 aa16.36■□□□□ 0.21
CIT-214ENST00000544588 FBXO3Q9UK99 471 aa16.36■□□□□ 0.21
CIT-214ENST00000544588 MYH3P11055 1940 aa16.36■□□□□ 0.21
CIT-214ENST00000544588 HSPA8P11142 646 aaKnown RBP16.35■□□□□ 0.21
CIT-214ENST00000544588 KIF23Q02241 960 aaPredicted RBP16.35■□□□□ 0.21
CIT-214ENST00000544588 ARMC9Q7Z3E5 817 aa16.35■□□□□ 0.21
CIT-214ENST00000544588 PRDM10Q9NQV6 1147 aa16.35■□□□□ 0.21
CIT-214ENST00000544588 GNL3LQ9NVN8 582 aaKnown RBP16.35■□□□□ 0.21
CIT-214ENST00000544588 CRKP46108 304 aa16.34■□□□□ 0.21
CIT-214ENST00000544588 GRIK5Q16478 980 aa16.34■□□□□ 0.21
CIT-214ENST00000544588 ITPRIPQ8IWB1 547 aa16.34■□□□□ 0.21
CIT-214ENST00000544588 TDRD3Q9H7E2 651 aaKnown RBP16.34■□□□□ 0.21
CIT-214ENST00000544588 COPRSQ9NQ92 184 aa16.34■□□□□ 0.21
CIT-214ENST00000544588 SERPINA10Q9UK55 444 aa16.34■□□□□ 0.21
CIT-214ENST00000544588 FAM155AB1AL88 458 aaPredicted RBP16.33■□□□□ 0.2
CIT-214ENST00000544588 DZIP1LQ8IYY4 767 aaKnown RBP16.33■□□□□ 0.2
CIT-214ENST00000544588 ANGEL1Q9UNK9 670 aaKnown RBP16.33■□□□□ 0.2
CIT-214ENST00000544588 SPEF2Q9C093 1822 aa16.33■□□□□ 0.2
CIT-214ENST00000544588 SLC10A3P09131 477 aa16.32■□□□□ 0.2
CIT-214ENST00000544588 AOX1Q06278 1338 aa16.32■□□□□ 0.2
CIT-214ENST00000544588 MKRN3Q13064 507 aaKnown RBP16.32■□□□□ 0.2
CIT-214ENST00000544588 G3BP1Q13283 466 aaKnown RBP eCLIP16.32■□□□□ 0.2
CIT-214ENST00000544588 SUPT20HL1Q3ZLR7 823 aa16.32■□□□□ 0.2
CIT-214ENST00000544588 WDR66Q8TBY9 1149 aa16.32■□□□□ 0.2
CIT-214ENST00000544588 ZNF70Q9UC06 446 aaPredicted RBP16.32■□□□□ 0.2
CIT-214ENST00000544588 FZD1Q9UP38 647 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms