RNA–Protein interactions for RNA: ENST00000544432.5

VAMP1-208, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3

Gene VAMP1, Length 759 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-208ENST00000544432 ZKSCAN2Q63HK3 967 aa17.38■□□□□ 0.37
VAMP1-208ENST00000544432 KIAA0825Q8IV33 1275 aa17.38■□□□□ 0.37
VAMP1-208ENST00000544432 MTMR14Q8NCE2 650 aa17.38■□□□□ 0.37
VAMP1-208ENST00000544432 FRAT1Q92837 279 aaPredicted RBP17.38■□□□□ 0.37
VAMP1-208ENST00000544432 POLR2AP24928 1970 aaKnown RBP17.38■□□□□ 0.37
VAMP1-208ENST00000544432 PUM3Q15397 648 aaKnown RBP17.37■□□□□ 0.37
VAMP1-208ENST00000544432 NBPF9Q3BBW0 867 aa17.37■□□□□ 0.37
VAMP1-208ENST00000544432 CAVIN4Q5BKX8 364 aa17.37■□□□□ 0.37
VAMP1-208ENST00000544432 ATG9AQ7Z3C6 839 aa17.37■□□□□ 0.37
VAMP1-208ENST00000544432 CAPNS2Q96L46 248 aa17.37■□□□□ 0.37
VAMP1-208ENST00000544432 ZNF408Q9H9D4 720 aa17.37■□□□□ 0.37
VAMP1-208ENST00000544432 MTX1Q13505 466 aa17.36■□□□□ 0.37
VAMP1-208ENST00000544432 DLK2Q6UY11 383 aa17.36■□□□□ 0.37
VAMP1-208ENST00000544432 C2orf69Q8N8R5 385 aa17.36■□□□□ 0.37
VAMP1-208ENST00000544432 GBA2Q9HCG7 927 aaPredicted RBP17.36■□□□□ 0.37
VAMP1-208ENST00000544432 COPRSQ9NQ92 184 aa17.36■□□□□ 0.37
VAMP1-208ENST00000544432 IFIT1P09914 478 aaKnown RBP17.35■□□□□ 0.37
VAMP1-208ENST00000544432 MAP2K2P36507 400 aa17.35■□□□□ 0.37
VAMP1-208ENST00000544432 CYP4F22Q6NT55 531 aa17.35■□□□□ 0.37
VAMP1-208ENST00000544432 VPS37DQ86XT2 251 aa17.35■□□□□ 0.37
VAMP1-208ENST00000544432 LPIN2Q92539 896 aa17.35■□□□□ 0.37
VAMP1-208ENST00000544432 CDCA5Q96FF9 252 aa17.35■□□□□ 0.37
VAMP1-208ENST00000544432 WBP1LQ9NX94 342 aa17.35■□□□□ 0.37
VAMP1-208ENST00000544432 IL15P40933 162 aaPredicted RBP17.34■□□□□ 0.37
VAMP1-208ENST00000544432 FKBP1BP68106 108 aa17.34■□□□□ 0.37
VAMP1-208ENST00000544432 MAP2K1Q02750 393 aaPredicted RBP17.34■□□□□ 0.37
VAMP1-208ENST00000544432 DLGAP5Q15398 846 aa17.34■□□□□ 0.37
VAMP1-208ENST00000544432 CEP126Q9P2H0 1117 aa17.34■□□□□ 0.37
VAMP1-208ENST00000544432 TNNQ9UQP3 1299 aa17.34■□□□□ 0.37
VAMP1-208ENST00000544432 GNAI2P04899 355 aa17.33■□□□□ 0.36
VAMP1-208ENST00000544432 SLC5A1P13866 664 aa17.33■□□□□ 0.36
VAMP1-208ENST00000544432 HUNKP57058 714 aa17.33■□□□□ 0.36
VAMP1-208ENST00000544432 MFSD14BQ5SR56 506 aa17.33■□□□□ 0.36
VAMP1-208ENST00000544432 PAXIP1Q6ZW49 1069 aaPredicted RBP17.33■□□□□ 0.36
VAMP1-208ENST00000544432 APOBEC3FQ8IUX4 373 aaKnown RBP17.33■□□□□ 0.36
VAMP1-208ENST00000544432 TBC1D22AQ8WUA7 517 aa17.33■□□□□ 0.36
VAMP1-208ENST00000544432 CLUAP1Q96AJ1 413 aa17.33■□□□□ 0.36
VAMP1-208ENST00000544432 ZBTB22O15209 634 aa17.32■□□□□ 0.36
VAMP1-208ENST00000544432 BCAMP50895 628 aa17.32■□□□□ 0.36
VAMP1-208ENST00000544432 CFAP100Q494V2 611 aa17.32■□□□□ 0.36
VAMP1-208ENST00000544432 TMEM57Q8N5G2 664 aa17.32■□□□□ 0.36
VAMP1-208ENST00000544432 SIL1Q9H173 461 aa17.32■□□□□ 0.36
VAMP1-208ENST00000544432 SPDYE2BA6NHP3 402 aa17.31■□□□□ 0.36
VAMP1-208ENST00000544432 SRGAP3O43295 1099 aa17.31■□□□□ 0.36
VAMP1-208ENST00000544432 SPDYE6P0CI01 402 aa17.31■□□□□ 0.36
VAMP1-208ENST00000544432 AIDAQ96BJ3 306 aa17.31■□□□□ 0.36
VAMP1-208ENST00000544432 MRIQ9BWK5 157 aa17.31■□□□□ 0.36
VAMP1-208ENST00000544432 SERPINA10Q9UK55 444 aa17.31■□□□□ 0.36
VAMP1-208ENST00000544432 PA2G4Q9UQ80 394 aaKnown RBP17.31■□□□□ 0.36
VAMP1-208ENST00000544432 JAG2Q9Y219 1238 aa17.31■□□□□ 0.36
VAMP1-208ENST00000544432 SUGT1Q9Y2Z0 365 aa17.31■□□□□ 0.36
VAMP1-208ENST00000544432 F8W031 263 aaPredicted RBP17.3■□□□□ 0.36
VAMP1-208ENST00000544432 MYO1BO43795 1136 aa17.3■□□□□ 0.36
VAMP1-208ENST00000544432 FRAT2O75474 233 aaPredicted RBP17.3■□□□□ 0.36
VAMP1-208ENST00000544432 HDLBPQ00341 1268 aaKnown RBP17.3■□□□□ 0.36
VAMP1-208ENST00000544432 ATP2B3Q16720 1220 aa17.3■□□□□ 0.36
VAMP1-208ENST00000544432 RGMBQ6NW40 437 aa17.3■□□□□ 0.36
VAMP1-208ENST00000544432 DZIP1LQ8IYY4 767 aaKnown RBP17.3■□□□□ 0.36
VAMP1-208ENST00000544432 CCDC102AQ96A19 550 aa17.3■□□□□ 0.36
VAMP1-208ENST00000544432 THSD7BQ9C0I4 1608 aa17.29■□□□□ 0.36
VAMP1-208ENST00000544432 FOXN1O15353 648 aa17.29■□□□□ 0.36
VAMP1-208ENST00000544432 CTCFP49711 727 aaPredicted RBP17.29■□□□□ 0.36
VAMP1-208ENST00000544432 NOGQ13253 232 aa17.29■□□□□ 0.36
VAMP1-208ENST00000544432 FTSJ3Q8IY81 847 aaKnown RBP17.29■□□□□ 0.36
VAMP1-208ENST00000544432 PRMT6Q96LA8 375 aaPredicted RBP17.29■□□□□ 0.36
VAMP1-208ENST00000544432 TTF2Q9UNY4 1162 aaKnown RBP17.29■□□□□ 0.36
VAMP1-208ENST00000544432 PPP2R3BQ9Y5P8 575 aa17.29■□□□□ 0.36
VAMP1-208ENST00000544432 COL1A1P02452 1464 aaPredicted RBP17.29■□□□□ 0.36
VAMP1-208ENST00000544432 AOC2O75106 756 aa17.28■□□□□ 0.36
VAMP1-208ENST00000544432 NF2P35240 595 aa17.28■□□□□ 0.36
VAMP1-208ENST00000544432 CHAF1AQ13111 956 aaPredicted RBP17.28■□□□□ 0.36
VAMP1-208ENST00000544432 PRDM10Q9NQV6 1147 aa17.28■□□□□ 0.36
VAMP1-208ENST00000544432 IQSEC3Q9UPP2 1182 aaPredicted RBP17.28■□□□□ 0.36
VAMP1-208ENST00000544432 FAM155AB1AL88 458 aaPredicted RBP17.27■□□□□ 0.36
VAMP1-208ENST00000544432 ZBTB7BO15156 539 aaPredicted RBP17.27■□□□□ 0.36
VAMP1-208ENST00000544432 RLBP1P12271 317 aa17.27■□□□□ 0.36
VAMP1-208ENST00000544432 GRM1Q13255 1194 aa17.27■□□□□ 0.36
VAMP1-208ENST00000544432 COL13A1Q5TAT6 717 aaPredicted RBP17.27■□□□□ 0.36
VAMP1-208ENST00000544432 WDR66Q8TBY9 1149 aa17.27■□□□□ 0.36
VAMP1-208ENST00000544432 DEFB129Q9H1M3 183 aa17.27■□□□□ 0.36
VAMP1-208ENST00000544432 GNL3LQ9NVN8 582 aaKnown RBP17.27■□□□□ 0.36
VAMP1-208ENST00000544432 SCAF8Q9UPN6 1271 aaKnown RBP17.27■□□□□ 0.36
VAMP1-208ENST00000544432 AKAP2Q9Y2D5 859 aa17.27■□□□□ 0.36
VAMP1-208ENST00000544432 PCDHAC2Q9Y5I4 1007 aa17.27■□□□□ 0.36
VAMP1-208ENST00000544432 SEMA3EO15041 775 aa17.26■□□□□ 0.35
VAMP1-208ENST00000544432 MS4A1P11836 297 aa17.26■□□□□ 0.35
VAMP1-208ENST00000544432 ZNF157P51786 506 aaPredicted RBP17.26■□□□□ 0.35
VAMP1-208ENST00000544432 RBM5P52756 815 aaKnown RBP eCLIP17.26■□□□□ 0.35
VAMP1-208ENST00000544432 PRAMEF18Q5VWM3 479 aa17.26■□□□□ 0.35
VAMP1-208ENST00000544432 BEGAINQ9BUH8 593 aa17.26■□□□□ 0.35
VAMP1-208ENST00000544432 PAPPA2Q9BXP8 1791 aa17.25■□□□□ 0.35
VAMP1-208ENST00000544432 MAST3O60307 1309 aa17.25■□□□□ 0.35
VAMP1-208ENST00000544432 PNMA6EA0A0J9YXQ4 647 aa17.25■□□□□ 0.35
VAMP1-208ENST00000544432 CA12O43570 354 aa17.25■□□□□ 0.35
VAMP1-208ENST00000544432 CRKP46108 304 aa17.25■□□□□ 0.35
VAMP1-208ENST00000544432 ATP8B2P98198 1209 aa17.25■□□□□ 0.35
VAMP1-208ENST00000544432 POLA2Q14181 598 aa17.25■□□□□ 0.35
VAMP1-208ENST00000544432 GRIK5Q16478 980 aa17.25■□□□□ 0.35
VAMP1-208ENST00000544432 SPDYE2Q495Y8 402 aa17.25■□□□□ 0.35
VAMP1-208ENST00000544432 ITPRIPQ8IWB1 547 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms