RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 FRAT2O75474 233 aaPredicted RBP36.6■■■■□ 3.45
CCM2-219ENST00000544363 POLD1P28340 1107 aa36.6■■■■□ 3.45
CCM2-219ENST00000544363 WASHC4Q2M389 1173 aa36.6■■■■□ 3.45
CCM2-219ENST00000544363 SLC9C2Q5TAH2 1124 aa36.6■■■■□ 3.45
CCM2-219ENST00000544363 APPBP2Q92624 585 aa36.6■■■■□ 3.45
CCM2-219ENST00000544363 GPR101Q96P66 508 aaPredicted RBP36.6■■■■□ 3.45
CCM2-219ENST00000544363 CACNA1SQ13698 1873 aa36.6■■■■□ 3.45
CCM2-219ENST00000544363 HSPA4P34932 840 aa36.59■■■■□ 3.45
CCM2-219ENST00000544363 MAP3K12Q12852 859 aa36.59■■■■□ 3.45
CCM2-219ENST00000544363 MPNDQ8N594 471 aa36.59■■■■□ 3.45
CCM2-219ENST00000544363 C6orf229H3BNL8 230 aa36.59■■■■□ 3.45
CCM2-219ENST00000544363 UBE3CQ15386 1083 aa36.59■■■■□ 3.45
CCM2-219ENST00000544363 CCDC129Q6ZRS4 1044 aa36.59■■■■□ 3.45
CCM2-219ENST00000544363 MAP4K1Q92918 833 aa36.59■■■■□ 3.45
CCM2-219ENST00000544363 OSBP2Q969R2 916 aa36.59■■■■□ 3.45
CCM2-219ENST00000544363 MAST3O60307 1309 aa36.58■■■■□ 3.45
CCM2-219ENST00000544363 OLFM4Q6UX06 510 aa36.58■■■■□ 3.45
CCM2-219ENST00000544363 WWC3Q9ULE0 1092 aa36.58■■■■□ 3.45
CCM2-219ENST00000544363 SLX4Q8IY92 1834 aa36.57■■■■□ 3.45
CCM2-219ENST00000544363 PDE6AP16499 860 aa36.57■■■■□ 3.44
CCM2-219ENST00000544363 ANAPC15P60006 121 aa36.57■■■■□ 3.44
CCM2-219ENST00000544363 TDRD7Q8NHU6 1098 aaKnown RBP36.56■■■■□ 3.44
CCM2-219ENST00000544363 KIF13BQ9NQT8 1826 aa36.56■■■■□ 3.44
CCM2-219ENST00000544363 MYH13Q9UKX3 1938 aa36.56■■■■□ 3.44
CCM2-219ENST00000544363 M0R2C6 588 aa36.56■■■■□ 3.44
CCM2-219ENST00000544363 DPP8Q6V1X1 898 aaPredicted RBP36.56■■■■□ 3.44
CCM2-219ENST00000544363 LRP2BPQ9P2M1 347 aa36.56■■■■□ 3.44
CCM2-219ENST00000544363 PALD1Q9ULE6 856 aa36.55■■■■□ 3.44
CCM2-219ENST00000544363 DLEC1Q9Y238 1755 aa36.54■■■■□ 3.44
CCM2-219ENST00000544363 ZNF532Q9HCE3 1301 aa36.54■■■■□ 3.44
CCM2-219ENST00000544363 TCRBV5S4A2TA0A5A2 114 aa36.54■■■■□ 3.44
CCM2-219ENST00000544363 IL17RAQ96F46 866 aa36.54■■■■□ 3.44
CCM2-219ENST00000544363 RBM8AQ9Y5S9 174 aaKnown RBP36.54■■■■□ 3.44
CCM2-219ENST00000544363 RABEP1Q15276 862 aa36.53■■■■□ 3.44
CCM2-219ENST00000544363 ABCF2Q9UG63 623 aa36.53■■■■□ 3.44
CCM2-219ENST00000544363 DUOX1Q9NRD9 1551 aa36.53■■■■□ 3.44
CCM2-219ENST00000544363 MAGEB6Q8N7X4 407 aa36.52■■■■□ 3.44
CCM2-219ENST00000544363 PUS7LQ9H0K6 701 aaKnown RBP36.52■■■■□ 3.44
CCM2-219ENST00000544363 CD209Q9NNX6 404 aa36.52■■■■□ 3.44
CCM2-219ENST00000544363 PSDA5PKW4 1024 aaPredicted RBP36.52■■■■□ 3.44
CCM2-219ENST00000544363 NECTIN1Q15223 517 aa36.52■■■■□ 3.44
CCM2-219ENST00000544363 C7orf43Q8WVR3 580 aa36.52■■■■□ 3.44
CCM2-219ENST00000544363 CHAF1AQ13111 956 aaPredicted RBP36.51■■■■□ 3.43
CCM2-219ENST00000544363 IL1R1P14778 569 aa36.5■■■■□ 3.43
CCM2-219ENST00000544363 DPEP1P16444 411 aa36.5■■■■□ 3.43
CCM2-219ENST00000544363 A0A0G2JLW4 131 aa36.49■■■■□ 3.43
CCM2-219ENST00000544363 BECN1Q14457 450 aa36.49■■■■□ 3.43
CCM2-219ENST00000544363 CC2D2BQ6DHV5 1058 aa36.49■■■■□ 3.43
CCM2-219ENST00000544363 TTLL6Q8N841 843 aa36.49■■■■□ 3.43
CCM2-219ENST00000544363 KCNB2Q92953 911 aa36.49■■■■□ 3.43
CCM2-219ENST00000544363 DSCC1Q9BVC3 393 aa36.49■■■■□ 3.43
CCM2-219ENST00000544363 KCNA3P22001 575 aa36.48■■■■□ 3.43
CCM2-219ENST00000544363 TGFB2P61812 414 aa36.48■■■■□ 3.43
CCM2-219ENST00000544363 RAI14Q9P0K7 980 aa36.48■■■■□ 3.43
CCM2-219ENST00000544363 WDR66Q8TBY9 1149 aa36.48■■■■□ 3.43
CCM2-219ENST00000544363 SGIP1Q9BQI5 828 aa36.48■■■■□ 3.43
CCM2-219ENST00000544363 ZC3H12CQ9C0D7 883 aaKnown RBP36.48■■■■□ 3.43
CCM2-219ENST00000544363 ZNF219Q9P2Y4 722 aaPredicted RBP36.47■■■■□ 3.43
CCM2-219ENST00000544363 SNX14Q9Y5W7 946 aa36.47■■■■□ 3.43
CCM2-219ENST00000544363 U3KPZ7 1027 aaPredicted RBP36.47■■■■□ 3.43
CCM2-219ENST00000544363 SALL1Q9NSC2 1324 aa36.47■■■■□ 3.43
CCM2-219ENST00000544363 GPAA1O43292 621 aa36.46■■■■□ 3.43
CCM2-219ENST00000544363 HSPD1P10809 573 aaKnown RBP36.46■■■■□ 3.43
CCM2-219ENST00000544363 VPS53Q5VIR6 699 aa36.46■■■■□ 3.43
CCM2-219ENST00000544363 CREB3L3Q68CJ9 461 aa36.46■■■■□ 3.43
CCM2-219ENST00000544363 EYA3Q99504 573 aa36.46■■■■□ 3.43
CCM2-219ENST00000544363 RIMBP2O15034 1052 aa36.45■■■■□ 3.43
CCM2-219ENST00000544363 ERICH6Q7L0X2 663 aa36.45■■■■□ 3.43
CCM2-219ENST00000544363 RASEFQ8IZ41 740 aa36.45■■■■□ 3.43
CCM2-219ENST00000544363 ZGPATQ8N5A5 531 aaKnown RBP36.45■■■■□ 3.43
CCM2-219ENST00000544363 SNX21Q969T3 373 aa36.45■■■■□ 3.43
CCM2-219ENST00000544363 COA1Q9GZY4 146 aa36.45■■■■□ 3.43
CCM2-219ENST00000544363 TBC1D2Q9BYX2 928 aa36.45■■■■□ 3.42
CCM2-219ENST00000544363 RNF20Q5VTR2 975 aa36.44■■■■□ 3.42
CCM2-219ENST00000544363 RTFDC1Q9BY42 306 aaPredicted RBP36.44■■■■□ 3.42
CCM2-219ENST00000544363 DAXXQ9UER7 740 aaPredicted RBP36.44■■■■□ 3.42
CCM2-219ENST00000544363 SLC27A2O14975 620 aa36.43■■■■□ 3.42
CCM2-219ENST00000544363 SPTY2D1Q68D10 685 aaPredicted RBP36.43■■■■□ 3.42
CCM2-219ENST00000544363 JAG2Q9Y219 1238 aa36.43■■■■□ 3.42
CCM2-219ENST00000544363 IGSF3O75054 1194 aa36.42■■■■□ 3.42
CCM2-219ENST00000544363 ZKSCAN1P17029 563 aaPredicted RBP36.42■■■■□ 3.42
CCM2-219ENST00000544363 CYP7A1P22680 504 aa36.42■■■■□ 3.42
CCM2-219ENST00000544363 SNED1Q8TER0 1413 aa36.42■■■■□ 3.42
CCM2-219ENST00000544363 AIDAQ96BJ3 306 aa36.41■■■■□ 3.42
CCM2-219ENST00000544363 KIAA1551Q9HCM1 1747 aa36.41■■■■□ 3.42
CCM2-219ENST00000544363 C21orf2O43822 256 aa36.41■■■■□ 3.42
CCM2-219ENST00000544363 GRIPAP1Q4V328 841 aa36.41■■■■□ 3.42
CCM2-219ENST00000544363 PTGER2P43116 358 aa36.4■■■■□ 3.42
CCM2-219ENST00000544363 TMED8Q6PL24 325 aaPredicted RBP36.4■■■■□ 3.42
CCM2-219ENST00000544363 NSUN4Q96CB9 384 aaKnown RBP36.4■■■■□ 3.42
CCM2-219ENST00000544363 PRDX5P30044 214 aa36.39■■■■□ 3.42
CCM2-219ENST00000544363 SLC4A3P48751 1232 aa36.39■■■■□ 3.42
CCM2-219ENST00000544363 NAA16Q6N069 864 aaPredicted RBP36.39■■■■□ 3.42
CCM2-219ENST00000544363 HSCBQ8IWL3 235 aa36.39■■■■□ 3.42
CCM2-219ENST00000544363 STRBPQ96SI9 672 aaKnown RBP36.39■■■■□ 3.42
CCM2-219ENST00000544363 FOXP2O15409 715 aa36.38■■■■□ 3.41
CCM2-219ENST00000544363 MECOMQ03112 1051 aa36.38■■■■□ 3.41
CCM2-219ENST00000544363 ZNF384Q8TF68 577 aa36.38■■■■□ 3.41
CCM2-219ENST00000544363 PIM2Q9P1W9 311 aa36.38■■■■□ 3.41
CCM2-219ENST00000544363 CD2APQ9Y5K6 639 aa36.37■■■■□ 3.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms