RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 WNT10BO00744 389 aa28.97■■■□□ 2.23
CHFR-222ENST00000544093 MTX1Q13505 466 aa28.97■■■□□ 2.23
CHFR-222ENST00000544093 FBXO33Q7Z6M2 555 aa28.97■■■□□ 2.23
CHFR-222ENST00000544093 FTSJ3Q8IY81 847 aaKnown RBP28.97■■■□□ 2.23
CHFR-222ENST00000544093 COPRSQ9NQ92 184 aa28.97■■■□□ 2.23
CHFR-222ENST00000544093 ADM5C9JUS6 153 aa28.96■■■□□ 2.23
CHFR-222ENST00000544093 GNAI2P04899 355 aa28.96■■■□□ 2.23
CHFR-222ENST00000544093 IL15P40933 162 aaPredicted RBP28.96■■■□□ 2.23
CHFR-222ENST00000544093 CERS5Q8N5B7 392 aa28.96■■■□□ 2.23
CHFR-222ENST00000544093 ASTN2O75129 1339 aaPredicted RBP28.95■■■□□ 2.23
CHFR-222ENST00000544093 WDR33Q9C0J8 1336 aaKnown RBP28.95■■■□□ 2.23
CHFR-222ENST00000544093 ARAP2Q8WZ64 1704 aa28.95■■■□□ 2.23
CHFR-222ENST00000544093 SLC5A1P13866 664 aa28.95■■■□□ 2.22
CHFR-222ENST00000544093 FGFR2P21802 821 aa28.95■■■□□ 2.22
CHFR-222ENST00000544093 NBPF9Q3BBW0 867 aa28.95■■■□□ 2.22
CHFR-222ENST00000544093 ATG9AQ7Z3C6 839 aa28.95■■■□□ 2.22
CHFR-222ENST00000544093 MTMR14Q8NCE2 650 aa28.95■■■□□ 2.22
CHFR-222ENST00000544093 LPIN2Q92539 896 aa28.95■■■□□ 2.22
CHFR-222ENST00000544093 CEP126Q9P2H0 1117 aa28.95■■■□□ 2.22
CHFR-222ENST00000544093 MFSD14BQ5SR56 506 aa28.94■■■□□ 2.22
CHFR-222ENST00000544093 PAXIP1Q6ZW49 1069 aaPredicted RBP28.94■■■□□ 2.22
CHFR-222ENST00000544093 TMEM57Q8N5G2 664 aa28.94■■■□□ 2.22
CHFR-222ENST00000544093 C2orf69Q8N8R5 385 aa28.94■■■□□ 2.22
CHFR-222ENST00000544093 SRGAP3O43295 1099 aa28.93■■■□□ 2.22
CHFR-222ENST00000544093 FRAT2O75474 233 aaPredicted RBP28.93■■■□□ 2.22
CHFR-222ENST00000544093 DLGAP5Q15398 846 aa28.93■■■□□ 2.22
CHFR-222ENST00000544093 DZIP1LQ8IYY4 767 aaKnown RBP28.93■■■□□ 2.22
CHFR-222ENST00000544093 TBC1D22AQ8WUA7 517 aa28.93■■■□□ 2.22
CHFR-222ENST00000544093 CAPNS2Q96L46 248 aa28.93■■■□□ 2.22
CHFR-222ENST00000544093 SIL1Q9H173 461 aa28.93■■■□□ 2.22
CHFR-222ENST00000544093 GBA2Q9HCG7 927 aaPredicted RBP28.93■■■□□ 2.22
CHFR-222ENST00000544093 TNNQ9UQP3 1299 aa28.93■■■□□ 2.22
CHFR-222ENST00000544093 ECM29Q5VYK3 1845 aa28.92■■■□□ 2.22
CHFR-222ENST00000544093 HSPA1AP0DMV8 641 aaKnown RBP28.92■■■□□ 2.22
CHFR-222ENST00000544093 HSPA1BP0DMV9 641 aaKnown RBP28.92■■■□□ 2.22
CHFR-222ENST00000544093 APOBEC3FQ8IUX4 373 aaKnown RBP28.92■■■□□ 2.22
CHFR-222ENST00000544093 CDCA5Q96FF9 252 aa28.92■■■□□ 2.22
CHFR-222ENST00000544093 ZBED3Q96IU2 234 aaPredicted RBP28.92■■■□□ 2.22
CHFR-222ENST00000544093 THSD7BQ9C0I4 1608 aa28.91■■■□□ 2.22
CHFR-222ENST00000544093 MYO1BO43795 1136 aa28.91■■■□□ 2.22
CHFR-222ENST00000544093 FKBP1BP68106 108 aa28.9■■■□□ 2.22
CHFR-222ENST00000544093 JAG2Q9Y219 1238 aa28.9■■■□□ 2.22
CHFR-222ENST00000544093 F8W031 263 aaPredicted RBP28.89■■■□□ 2.22
CHFR-222ENST00000544093 MS4A1P11836 297 aa28.89■■■□□ 2.22
CHFR-222ENST00000544093 HUNKP57058 714 aa28.89■■■□□ 2.22
CHFR-222ENST00000544093 MAP2K1Q02750 393 aaPredicted RBP28.89■■■□□ 2.22
CHFR-222ENST00000544093 ATP2B3Q16720 1220 aa28.89■■■□□ 2.22
CHFR-222ENST00000544093 CYP4F22Q6NT55 531 aa28.89■■■□□ 2.22
CHFR-222ENST00000544093 COL1A1P02452 1464 aaPredicted RBP28.89■■■□□ 2.22
CHFR-222ENST00000544093 MYH13Q9UKX3 1938 aa28.88■■■□□ 2.21
CHFR-222ENST00000544093 MAP2K2P36507 400 aa28.88■■■□□ 2.21
CHFR-222ENST00000544093 BCAMP50895 628 aa28.88■■■□□ 2.21
CHFR-222ENST00000544093 DLK2Q6UY11 383 aa28.88■■■□□ 2.21
CHFR-222ENST00000544093 SERPINA10Q9UK55 444 aa28.88■■■□□ 2.21
CHFR-222ENST00000544093 PA2G4Q9UQ80 394 aaKnown RBP28.88■■■□□ 2.21
CHFR-222ENST00000544093 CFAP100Q494V2 611 aa28.87■■■□□ 2.21
CHFR-222ENST00000544093 AIDAQ96BJ3 306 aa28.87■■■□□ 2.21
CHFR-222ENST00000544093 GNL3LQ9NVN8 582 aaKnown RBP28.87■■■□□ 2.21
CHFR-222ENST00000544093 TTF2Q9UNY4 1162 aaKnown RBP28.87■■■□□ 2.21
CHFR-222ENST00000544093 SUGT1Q9Y2Z0 365 aa28.87■■■□□ 2.21
CHFR-222ENST00000544093 PAPPA2Q9BXP8 1791 aa28.86■■■□□ 2.21
CHFR-222ENST00000544093 SPDYE2BA6NHP3 402 aa28.86■■■□□ 2.21
CHFR-222ENST00000544093 SPDYE6P0CI01 402 aa28.86■■■□□ 2.21
CHFR-222ENST00000544093 NF2P35240 595 aa28.86■■■□□ 2.21
CHFR-222ENST00000544093 ITPRIPQ8IWB1 547 aa28.86■■■□□ 2.21
CHFR-222ENST00000544093 IQSEC3Q9UPP2 1182 aaPredicted RBP28.85■■■□□ 2.21
CHFR-222ENST00000544093 AKAP2Q9Y2D5 859 aa28.85■■■□□ 2.21
CHFR-222ENST00000544093 RBM5P52756 815 aaKnown RBP eCLIP28.84■■■□□ 2.21
CHFR-222ENST00000544093 CHAF1AQ13111 956 aaPredicted RBP28.84■■■□□ 2.21
CHFR-222ENST00000544093 GRM1Q13255 1194 aa28.84■■■□□ 2.21
CHFR-222ENST00000544093 WBP1LQ9NX94 342 aa28.84■■■□□ 2.21
CHFR-222ENST00000544093 PPP2R3BQ9Y5P8 575 aa28.84■■■□□ 2.21
CHFR-222ENST00000544093 ZBTB22O15209 634 aa28.83■■■□□ 2.21
CHFR-222ENST00000544093 HDLBPQ00341 1268 aaKnown RBP28.83■■■□□ 2.21
CHFR-222ENST00000544093 RGMBQ6NW40 437 aa28.83■■■□□ 2.21
CHFR-222ENST00000544093 WDR66Q8TBY9 1149 aa28.83■■■□□ 2.21
CHFR-222ENST00000544093 CCDC102AQ96A19 550 aa28.83■■■□□ 2.21
CHFR-222ENST00000544093 MAST3O60307 1309 aa28.83■■■□□ 2.21
CHFR-222ENST00000544093 SEMA3EO15041 775 aa28.82■■■□□ 2.2
CHFR-222ENST00000544093 NOGQ13253 232 aa28.82■■■□□ 2.2
CHFR-222ENST00000544093 BEGAINQ9BUH8 593 aa28.82■■■□□ 2.2
CHFR-222ENST00000544093 RLBP1P12271 317 aa28.81■■■□□ 2.2
CHFR-222ENST00000544093 PRMT6Q96LA8 375 aaPredicted RBP28.81■■■□□ 2.2
CHFR-222ENST00000544093 MRIQ9BWK5 157 aa28.81■■■□□ 2.2
CHFR-222ENST00000544093 ZBTB7BO15156 539 aaPredicted RBP28.8■■■□□ 2.2
CHFR-222ENST00000544093 PNMA6EA0A0J9YXQ4 647 aa28.79■■■□□ 2.2
CHFR-222ENST00000544093 G3BP1Q13283 466 aaKnown RBP eCLIP28.79■■■□□ 2.2
CHFR-222ENST00000544093 TNFAIP1Q13829 316 aa28.79■■■□□ 2.2
CHFR-222ENST00000544093 DEFB129Q9H1M3 183 aa28.79■■■□□ 2.2
CHFR-222ENST00000544093 RCAN3Q9UKA8 241 aa28.79■■■□□ 2.2
CHFR-222ENST00000544093 SCAF8Q9UPN6 1271 aaKnown RBP28.79■■■□□ 2.2
CHFR-222ENST00000544093 CRKP46108 304 aa28.78■■■□□ 2.2
CHFR-222ENST00000544093 CTCFP49711 727 aaPredicted RBP28.78■■■□□ 2.2
CHFR-222ENST00000544093 ZNF157P51786 506 aaPredicted RBP28.78■■■□□ 2.2
CHFR-222ENST00000544093 TEKT1Q969V4 418 aa28.78■■■□□ 2.2
CHFR-222ENST00000544093 DENND2AQ9ULE3 1009 aa28.78■■■□□ 2.2
CHFR-222ENST00000544093 ATP8B2P98198 1209 aa28.77■■■□□ 2.2
CHFR-222ENST00000544093 POLA2Q14181 598 aa28.77■■■□□ 2.2
CHFR-222ENST00000544093 SSH3Q8TE77 659 aa28.77■■■□□ 2.2
CHFR-222ENST00000544093 A0A1B0GUL7 405 aa28.76■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms