RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 CENPQQ7L2Z9 268 aaPredicted RBP17.72■□□□□ 0.43
TNFRSF1A-216ENST00000543995 CHD1LQ86WJ1 897 aa17.72■□□□□ 0.43
TNFRSF1A-216ENST00000543995 GPC2Q8N158 579 aa17.72■□□□□ 0.43
TNFRSF1A-216ENST00000543995 DENND2AQ9ULE3 1009 aa17.72■□□□□ 0.43
TNFRSF1A-216ENST00000543995 GLTPD2A6NH11 291 aa17.72■□□□□ 0.43
TNFRSF1A-216ENST00000543995 ARID4AP29374 1257 aaPredicted RBP17.72■□□□□ 0.43
TNFRSF1A-216ENST00000543995 C16orf71Q8IYS4 520 aaPredicted RBP17.72■□□□□ 0.43
TNFRSF1A-216ENST00000543995 GPATCH3Q96I76 525 aa17.72■□□□□ 0.43
TNFRSF1A-216ENST00000543995 VIL1P09327 827 aaKnown RBP17.71■□□□□ 0.43
TNFRSF1A-216ENST00000543995 RASGRF1Q13972 1273 aa17.71■□□□□ 0.43
TNFRSF1A-216ENST00000543995 YY1P25490 414 aa17.7■□□□□ 0.42
TNFRSF1A-216ENST00000543995 DACT2Q5SW24 774 aa17.7■□□□□ 0.42
TNFRSF1A-216ENST00000543995 RSBN1LQ6PCB5 846 aaPredicted RBP17.7■□□□□ 0.42
TNFRSF1A-216ENST00000543995 ZNF526Q8TF50 670 aaPredicted RBP17.7■□□□□ 0.42
TNFRSF1A-216ENST00000543995 MXD3Q9BW11 206 aa17.7■□□□□ 0.42
TNFRSF1A-216ENST00000543995 ZBTB12Q9Y330 459 aaPredicted RBP17.7■□□□□ 0.42
TNFRSF1A-216ENST00000543995 FAM205AQ6ZU69 1335 aa17.7■□□□□ 0.42
TNFRSF1A-216ENST00000543995 KDM2BQ8NHM5 1336 aa17.7■□□□□ 0.42
TNFRSF1A-216ENST00000543995 ZNF646O15015 1829 aaPredicted RBP17.7■□□□□ 0.42
TNFRSF1A-216ENST00000543995 MCAMP43121 646 aa17.69■□□□□ 0.42
TNFRSF1A-216ENST00000543995 MFSD14BQ5SR56 506 aa17.69■□□□□ 0.42
TNFRSF1A-216ENST00000543995 SPATA5Q8NB90 893 aa17.69■□□□□ 0.42
TNFRSF1A-216ENST00000543995 WDR66Q8TBY9 1149 aa17.69■□□□□ 0.42
TNFRSF1A-216ENST00000543995 ZNF512BQ96KM6 892 aaPredicted RBP17.69■□□□□ 0.42
TNFRSF1A-216ENST00000543995 COL1A1P02452 1464 aaPredicted RBP17.68■□□□□ 0.42
TNFRSF1A-216ENST00000543995 MYO3BQ8WXR4 1341 aa17.68■□□□□ 0.42
TNFRSF1A-216ENST00000543995 SCARF1Q14162 830 aa17.68■□□□□ 0.42
TNFRSF1A-216ENST00000543995 OTUD7AQ8TE49 926 aaPredicted RBP17.68■□□□□ 0.42
TNFRSF1A-216ENST00000543995 TBC1D22AQ8WUA7 517 aa17.68■□□□□ 0.42
TNFRSF1A-216ENST00000543995 SNRKQ9NRH2 765 aa17.68■□□□□ 0.42
TNFRSF1A-216ENST00000543995 ECHDC1Q9NTX5 307 aa17.68■□□□□ 0.42
TNFRSF1A-216ENST00000543995 HMG20BQ9P0W2 317 aa17.68■□□□□ 0.42
TNFRSF1A-216ENST00000543995 AKAP11Q9UKA4 1901 aa17.68■□□□□ 0.42
TNFRSF1A-216ENST00000543995 MX1P20591 662 aa17.67■□□□□ 0.42
TNFRSF1A-216ENST00000543995 GMPSP49915 693 aaPredicted RBP17.67■□□□□ 0.42
TNFRSF1A-216ENST00000543995 PI16Q6UXB8 463 aa17.67■□□□□ 0.42
TNFRSF1A-216ENST00000543995 AGBL3Q8NEM8 1001 aa17.67■□□□□ 0.42
TNFRSF1A-216ENST00000543995 PDS5AQ29RF7 1337 aaKnown RBP17.67■□□□□ 0.42
TNFRSF1A-216ENST00000543995 ZBTB22O15209 634 aa17.67■□□□□ 0.42
TNFRSF1A-216ENST00000543995 RPS12P25398 132 aaKnown RBP17.67■□□□□ 0.42
TNFRSF1A-216ENST00000543995 LMOD1P29536 600 aaPredicted RBP17.67■□□□□ 0.42
TNFRSF1A-216ENST00000543995 FKBP1AP62942 108 aaKnown RBP17.67■□□□□ 0.42
TNFRSF1A-216ENST00000543995 TSHZ3Q63HK5 1081 aa17.67■□□□□ 0.42
TNFRSF1A-216ENST00000543995 BOLA2Q9H3K6 86 aa17.67■□□□□ 0.42
TNFRSF1A-216ENST00000543995 TTC41PQ6P2S7 1318 aa17.66■□□□□ 0.42
TNFRSF1A-216ENST00000543995 F8W031 263 aaPredicted RBP17.66■□□□□ 0.42
TNFRSF1A-216ENST00000543995 ATP5JP18859 108 aa17.66■□□□□ 0.42
TNFRSF1A-216ENST00000543995 KIAA0825Q8IV33 1275 aa17.66■□□□□ 0.42
TNFRSF1A-216ENST00000543995 ZGPATQ8N5A5 531 aaKnown RBP17.66■□□□□ 0.42
TNFRSF1A-216ENST00000543995 CERS5Q8N5B7 392 aa17.66■□□□□ 0.42
TNFRSF1A-216ENST00000543995 ABCF2Q9UG63 623 aa17.66■□□□□ 0.42
TNFRSF1A-216ENST00000543995 WDR90Q96KV7 1748 aa17.66■□□□□ 0.42
TNFRSF1A-216ENST00000543995 ERC2O15083 957 aa17.65■□□□□ 0.42
TNFRSF1A-216ENST00000543995 ZAP70P43403 619 aa17.65■□□□□ 0.42
TNFRSF1A-216ENST00000543995 SCNN1DP51172 638 aa17.65■□□□□ 0.42
TNFRSF1A-216ENST00000543995 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.65■□□□□ 0.42
TNFRSF1A-216ENST00000543995 L3MBTL3Q96JM7 780 aaPredicted RBP17.65■□□□□ 0.42
TNFRSF1A-216ENST00000543995 DNAJC2Q99543 621 aaKnown RBP17.65■□□□□ 0.42
TNFRSF1A-216ENST00000543995 NDUFB9Q9Y6M9 179 aa17.65■□□□□ 0.42
TNFRSF1A-216ENST00000543995 SALL1Q9NSC2 1324 aa17.64■□□□□ 0.41
TNFRSF1A-216ENST00000543995 OGFOD1Q8N543 542 aa17.64■□□□□ 0.41
TNFRSF1A-216ENST00000543995 DPF2Q92785 391 aa17.64■□□□□ 0.41
TNFRSF1A-216ENST00000543995 GPRC5DQ9NZD1 345 aa17.64■□□□□ 0.41
TNFRSF1A-216ENST00000543995 CNOT7Q9UIV1 285 aaKnown RBP17.64■□□□□ 0.41
TNFRSF1A-216ENST00000543995 SCN4AP35499 1836 aa17.64■□□□□ 0.41
TNFRSF1A-216ENST00000543995 SALL3Q9BXA9 1300 aa17.64■□□□□ 0.41
TNFRSF1A-216ENST00000543995 IQCA1LA6NCM1 817 aa17.63■□□□□ 0.41
TNFRSF1A-216ENST00000543995 H7C1D1 291 aa17.63■□□□□ 0.41
TNFRSF1A-216ENST00000543995 USP17L8P0C7I0 530 aa17.63■□□□□ 0.41
TNFRSF1A-216ENST00000543995 PDE1AP54750 535 aa17.63■□□□□ 0.41
TNFRSF1A-216ENST00000543995 TBC1D9Q6ZT07 1266 aa17.63■□□□□ 0.41
TNFRSF1A-216ENST00000543995 MICALL2Q8IY33 904 aa17.63■□□□□ 0.41
TNFRSF1A-216ENST00000543995 GMLQ99445 158 aa17.63■□□□□ 0.41
TNFRSF1A-216ENST00000543995 RRAGCQ9HB90 399 aa17.63■□□□□ 0.41
TNFRSF1A-216ENST00000543995 GPBP1L1Q9HC44 474 aaPredicted RBP17.63■□□□□ 0.41
TNFRSF1A-216ENST00000543995 HACL1Q9UJ83 578 aa17.63■□□□□ 0.41
TNFRSF1A-216ENST00000543995 HDAC9Q9UKV0 1011 aa17.63■□□□□ 0.41
TNFRSF1A-216ENST00000543995 TTF2Q9UNY4 1162 aaKnown RBP17.63■□□□□ 0.41
TNFRSF1A-216ENST00000543995 GLRX3O76003 335 aaKnown RBP17.62■□□□□ 0.41
TNFRSF1A-216ENST00000543995 CYP2E1P05181 493 aaPredicted RBP17.62■□□□□ 0.41
TNFRSF1A-216ENST00000543995 LDHBP07195 334 aaKnown RBP17.62■□□□□ 0.41
TNFRSF1A-216ENST00000543995 PRDX5P30044 214 aa17.62■□□□□ 0.41
TNFRSF1A-216ENST00000543995 EPS15P42566 896 aa17.62■□□□□ 0.41
TNFRSF1A-216ENST00000543995 SPTY2D1Q68D10 685 aaPredicted RBP17.62■□□□□ 0.41
TNFRSF1A-216ENST00000543995 ERICH6Q7L0X2 663 aa17.62■□□□□ 0.41
TNFRSF1A-216ENST00000543995 LRP2BPQ9P2M1 347 aa17.62■□□□□ 0.41
TNFRSF1A-216ENST00000543995 SUGT1Q9Y2Z0 365 aa17.62■□□□□ 0.41
TNFRSF1A-216ENST00000543995 MYO5AQ9Y4I1 1855 aaKnown RBP17.62■□□□□ 0.41
TNFRSF1A-216ENST00000543995 SHTN1A0MZ66 631 aa17.62■□□□□ 0.41
TNFRSF1A-216ENST00000543995 GOLIM4O00461 696 aa17.62■□□□□ 0.41
TNFRSF1A-216ENST00000543995 PDE4AP27815 886 aa17.62■□□□□ 0.41
TNFRSF1A-216ENST00000543995 GRIK5Q16478 980 aa17.62■□□□□ 0.41
TNFRSF1A-216ENST00000543995 PLEKHM2Q8IWE5 1019 aa17.62■□□□□ 0.41
TNFRSF1A-216ENST00000543995 PI4K2BQ8TCG2 481 aa17.62■□□□□ 0.41
TNFRSF1A-216ENST00000543995 HAUS7Q99871 368 aa17.62■□□□□ 0.41
TNFRSF1A-216ENST00000543995 NMRK2Q9NPI5 230 aa17.62■□□□□ 0.41
TNFRSF1A-216ENST00000543995 RAI14Q9P0K7 980 aa17.62■□□□□ 0.41
TNFRSF1A-216ENST00000543995 STAP2Q9UGK3 403 aa17.62■□□□□ 0.41
TNFRSF1A-216ENST00000543995 VEGFAP15692 232 aaPredicted RBP17.61■□□□□ 0.41
TNFRSF1A-216ENST00000543995 TTF1Q15361 905 aaPredicted RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms