RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 VIL1P09327 827 aaKnown RBP16.71■□□□□ 0.27
SP140-213ENST00000543928 CHAF1AQ13111 956 aaPredicted RBP16.71■□□□□ 0.27
SP140-213ENST00000543928 TTC39AQ5SRH9 613 aa16.71■□□□□ 0.27
SP140-213ENST00000543928 DACT2Q5SW24 774 aa16.71■□□□□ 0.27
SP140-213ENST00000543928 B4GALNT3Q6L9W6 998 aa16.71■□□□□ 0.27
SP140-213ENST00000543928 ZNF526Q8TF50 670 aaPredicted RBP16.71■□□□□ 0.27
SP140-213ENST00000543928 MXD3Q9BW11 206 aa16.71■□□□□ 0.27
SP140-213ENST00000543928 ZBTB47Q9UFB7 747 aaPredicted RBP16.71■□□□□ 0.27
SP140-213ENST00000543928 FAM205AQ6ZU69 1335 aa16.7■□□□□ 0.26
SP140-213ENST00000543928 KDM2BQ8NHM5 1336 aa16.7■□□□□ 0.26
SP140-213ENST00000543928 SEMA3EO15041 775 aa16.7■□□□□ 0.26
SP140-213ENST00000543928 ARID4AP29374 1257 aaPredicted RBP16.7■□□□□ 0.26
SP140-213ENST00000543928 GMPSP49915 693 aaPredicted RBP16.7■□□□□ 0.26
SP140-213ENST00000543928 ERICH6BQ5W0A0 696 aa16.7■□□□□ 0.26
SP140-213ENST00000543928 RSBN1LQ6PCB5 846 aaPredicted RBP16.7■□□□□ 0.26
SP140-213ENST00000543928 DENND2AQ9ULE3 1009 aa16.7■□□□□ 0.26
SP140-213ENST00000543928 ZBTB12Q9Y330 459 aaPredicted RBP16.7■□□□□ 0.26
SP140-213ENST00000543928 COL1A1P02452 1464 aaPredicted RBP16.69■□□□□ 0.26
SP140-213ENST00000543928 MYH13Q9UKX3 1938 aa16.69■□□□□ 0.26
SP140-213ENST00000543928 ZNF646O15015 1829 aaPredicted RBP16.69■□□□□ 0.26
SP140-213ENST00000543928 UQCRFS1P1P0C7P4 283 aa16.69■□□□□ 0.26
SP140-213ENST00000543928 RASGRF1Q13972 1273 aa16.69■□□□□ 0.26
SP140-213ENST00000543928 ZBTB22O15209 634 aa16.68■□□□□ 0.26
SP140-213ENST00000543928 RPS12P25398 132 aaKnown RBP16.68■□□□□ 0.26
SP140-213ENST00000543928 SCARF1Q14162 830 aa16.68■□□□□ 0.26
SP140-213ENST00000543928 MFSD14BQ5SR56 506 aa16.68■□□□□ 0.26
SP140-213ENST00000543928 C16orf71Q8IYS4 520 aaPredicted RBP16.68■□□□□ 0.26
SP140-213ENST00000543928 CERS5Q8N5B7 392 aa16.68■□□□□ 0.26
SP140-213ENST00000543928 AGBL3Q8NEM8 1001 aa16.68■□□□□ 0.26
SP140-213ENST00000543928 L3MBTL3Q96JM7 780 aaPredicted RBP16.68■□□□□ 0.26
SP140-213ENST00000543928 ZNF512BQ96KM6 892 aaPredicted RBP16.68■□□□□ 0.26
SP140-213ENST00000543928 MYO3BQ8WXR4 1341 aa16.68■□□□□ 0.26
SP140-213ENST00000543928 MCAMP43121 646 aa16.67■□□□□ 0.26
SP140-213ENST00000543928 SCNN1DP51172 638 aa16.67■□□□□ 0.26
SP140-213ENST00000543928 FKBP1AP62942 108 aaKnown RBP16.67■□□□□ 0.26
SP140-213ENST00000543928 NUCB1Q02818 461 aa16.67■□□□□ 0.26
SP140-213ENST00000543928 PI16Q6UXB8 463 aa16.67■□□□□ 0.26
SP140-213ENST00000543928 CHD1LQ86WJ1 897 aa16.67■□□□□ 0.26
SP140-213ENST00000543928 SPATA5Q8NB90 893 aa16.67■□□□□ 0.26
SP140-213ENST00000543928 WDR66Q8TBY9 1149 aa16.67■□□□□ 0.26
SP140-213ENST00000543928 CCDC136Q96JN2 1154 aa16.67■□□□□ 0.26
SP140-213ENST00000543928 GMLQ99445 158 aa16.67■□□□□ 0.26
SP140-213ENST00000543928 LNPKQ9C0E8 428 aa16.67■□□□□ 0.26
SP140-213ENST00000543928 HMG20BQ9P0W2 317 aa16.67■□□□□ 0.26
SP140-213ENST00000543928 WDR90Q96KV7 1748 aa16.67■□□□□ 0.26
SP140-213ENST00000543928 LMOD1P29536 600 aaPredicted RBP16.66■□□□□ 0.26
SP140-213ENST00000543928 CACNB1Q02641 598 aaPredicted RBP16.66■□□□□ 0.26
SP140-213ENST00000543928 OTUD7AQ8TE49 926 aaPredicted RBP16.66■□□□□ 0.26
SP140-213ENST00000543928 TBC1D22AQ8WUA7 517 aa16.66■□□□□ 0.26
SP140-213ENST00000543928 DPF2Q92785 391 aa16.66■□□□□ 0.26
SP140-213ENST00000543928 RRAGCQ9HB90 399 aa16.66■□□□□ 0.26
SP140-213ENST00000543928 GPBP1L1Q9HC44 474 aaPredicted RBP16.66■□□□□ 0.26
SP140-213ENST00000543928 NMRK2Q9NPI5 230 aa16.66■□□□□ 0.26
SP140-213ENST00000543928 SNRKQ9NRH2 765 aa16.66■□□□□ 0.26
SP140-213ENST00000543928 GPRC5DQ9NZD1 345 aa16.66■□□□□ 0.26
SP140-213ENST00000543928 PDS5AQ29RF7 1337 aaKnown RBP16.66■□□□□ 0.26
SP140-213ENST00000543928 SHTN1A0MZ66 631 aa16.65■□□□□ 0.26
SP140-213ENST00000543928 POTECB2RU33 542 aa16.65■□□□□ 0.26
SP140-213ENST00000543928 KIAA0825Q8IV33 1275 aa16.65■□□□□ 0.26
SP140-213ENST00000543928 MICALL2Q8IY33 904 aa16.65■□□□□ 0.26
SP140-213ENST00000543928 ZNF784Q8NCA9 323 aaPredicted RBP16.65■□□□□ 0.26
SP140-213ENST00000543928 CNOT7Q9UIV1 285 aaKnown RBP16.65■□□□□ 0.26
SP140-213ENST00000543928 HACL1Q9UJ83 578 aa16.65■□□□□ 0.26
SP140-213ENST00000543928 IQCA1LA6NCM1 817 aa16.64■□□□□ 0.25
SP140-213ENST00000543928 F8W031 263 aaPredicted RBP16.64■□□□□ 0.25
SP140-213ENST00000543928 USP17L8P0C7I0 530 aa16.64■□□□□ 0.25
SP140-213ENST00000543928 EPS15P42566 896 aa16.64■□□□□ 0.25
SP140-213ENST00000543928 GRIK5Q16478 980 aa16.64■□□□□ 0.25
SP140-213ENST00000543928 CENPQQ7L2Z9 268 aaPredicted RBP16.64■□□□□ 0.25
SP140-213ENST00000543928 GPATCH3Q96I76 525 aa16.64■□□□□ 0.25
SP140-213ENST00000543928 ECHDC1Q9NTX5 307 aa16.64■□□□□ 0.25
SP140-213ENST00000543928 PPP4R2Q9NY27 417 aa16.64■□□□□ 0.25
SP140-213ENST00000543928 AKAP11Q9UKA4 1901 aa16.64■□□□□ 0.25
SP140-213ENST00000543928 SALL1Q9NSC2 1324 aa16.64■□□□□ 0.25
SP140-213ENST00000543928 SCN4AP35499 1836 aa16.63■□□□□ 0.25
SP140-213ENST00000543928 H7C1D1 291 aa16.63■□□□□ 0.25
SP140-213ENST00000543928 VEGFAP15692 232 aaPredicted RBP16.63■□□□□ 0.25
SP140-213ENST00000543928 ATP5JP18859 108 aa16.63■□□□□ 0.25
SP140-213ENST00000543928 MX1P20591 662 aa16.63■□□□□ 0.25
SP140-213ENST00000543928 TSHZ3Q63HK5 1081 aa16.63■□□□□ 0.25
SP140-213ENST00000543928 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.63■□□□□ 0.25
SP140-213ENST00000543928 NDUFB9Q9Y6M9 179 aa16.63■□□□□ 0.25
SP140-213ENST00000543928 SALL3Q9BXA9 1300 aa16.63■□□□□ 0.25
SP140-213ENST00000543928 EPHX2P34913 555 aa16.62■□□□□ 0.25
SP140-213ENST00000543928 ZAP70P43403 619 aa16.62■□□□□ 0.25
SP140-213ENST00000543928 TBC1D9Q6ZT07 1266 aa16.62■□□□□ 0.25
SP140-213ENST00000543928 OGFOD1Q8N543 542 aa16.62■□□□□ 0.25
SP140-213ENST00000543928 ZGPATQ8N5A5 531 aaKnown RBP16.62■□□□□ 0.25
SP140-213ENST00000543928 BOLA2Q9H3K6 86 aa16.62■□□□□ 0.25
SP140-213ENST00000543928 TAF1DQ9H5J8 278 aaPredicted RBP16.62■□□□□ 0.25
SP140-213ENST00000543928 ABCF2Q9UG63 623 aa16.62■□□□□ 0.25
SP140-213ENST00000543928 TTF2Q9UNY4 1162 aaKnown RBP16.62■□□□□ 0.25
SP140-213ENST00000543928 SUGT1Q9Y2Z0 365 aa16.62■□□□□ 0.25
SP140-213ENST00000543928 TTC41PQ6P2S7 1318 aa16.62■□□□□ 0.25
SP140-213ENST00000543928 CYP2E1P05181 493 aaPredicted RBP16.61■□□□□ 0.25
SP140-213ENST00000543928 PRDX5P30044 214 aa16.61■□□□□ 0.25
SP140-213ENST00000543928 ZNF280AP59817 542 aaPredicted RBP16.61■□□□□ 0.25
SP140-213ENST00000543928 DNAJC2Q99543 621 aaKnown RBP16.61■□□□□ 0.25
SP140-213ENST00000543928 ADARB2Q9NS39 739 aaKnown RBP16.61■□□□□ 0.25
SP140-213ENST00000543928 HDAC9Q9UKV0 1011 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms