RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 MICALL2Q8IY33 904 aa18.59■□□□□ 0.57
CD9-210ENST00000543916 CERS5Q8N5B7 392 aa18.59■□□□□ 0.57
CD9-210ENST00000543916 AGBL3Q8NEM8 1001 aa18.59■□□□□ 0.57
CD9-210ENST00000543916 DPF2Q92785 391 aa18.59■□□□□ 0.57
CD9-210ENST00000543916 EAF2Q96CJ1 260 aaPredicted RBP18.59■□□□□ 0.57
CD9-210ENST00000543916 DBNDD2Q9BQY9 259 aa18.59■□□□□ 0.57
CD9-210ENST00000543916 DCTPP1Q9H773 170 aa18.59■□□□□ 0.57
CD9-210ENST00000543916 TLR7Q9NYK1 1049 aaKnown RBP18.59■□□□□ 0.57
CD9-210ENST00000543916 CNOT7Q9UIV1 285 aaKnown RBP18.59■□□□□ 0.57
CD9-210ENST00000543916 FRAT2O75474 233 aaPredicted RBP18.58■□□□□ 0.56
CD9-210ENST00000543916 CENPBP07199 599 aaPredicted RBP18.58■□□□□ 0.56
CD9-210ENST00000543916 EPHX2P34913 555 aa18.58■□□□□ 0.56
CD9-210ENST00000543916 CHAF1AQ13111 956 aaPredicted RBP18.58■□□□□ 0.56
CD9-210ENST00000543916 CCDC8Q9H0W5 538 aaPredicted RBP18.58■□□□□ 0.56
CD9-210ENST00000543916 MYO3BQ8WXR4 1341 aa18.57■□□□□ 0.56
CD9-210ENST00000543916 HDAC1Q13547 482 aaPredicted RBP18.57■□□□□ 0.56
CD9-210ENST00000543916 DBNLQ9UJU6 430 aaKnown RBP18.57■□□□□ 0.56
CD9-210ENST00000543916 AKAP11Q9UKA4 1901 aa18.57■□□□□ 0.56
CD9-210ENST00000543916 SMARCA5O60264 1052 aaPredicted RBP18.56■□□□□ 0.56
CD9-210ENST00000543916 POTEIP0CG38 1075 aa18.56■□□□□ 0.56
CD9-210ENST00000543916 POTEJP0CG39 1038 aa18.56■□□□□ 0.56
CD9-210ENST00000543916 FKBP1AP62942 108 aaKnown RBP18.56■□□□□ 0.56
CD9-210ENST00000543916 GORABQ5T7V8 394 aa18.56■□□□□ 0.56
CD9-210ENST00000543916 AACSQ86V21 672 aa18.56■□□□□ 0.56
CD9-210ENST00000543916 ADARB2Q9NS39 739 aaKnown RBP18.56■□□□□ 0.56
CD9-210ENST00000543916 GNL3LQ9NVN8 582 aaKnown RBP18.56■□□□□ 0.56
CD9-210ENST00000543916 ZBTB22O15209 634 aa18.55■□□□□ 0.56
CD9-210ENST00000543916 EGFRP00533 1210 aa18.55■□□□□ 0.56
CD9-210ENST00000543916 ARID4AP29374 1257 aaPredicted RBP18.55■□□□□ 0.56
CD9-210ENST00000543916 RASGRF1Q13972 1273 aa18.55■□□□□ 0.56
CD9-210ENST00000543916 MFSD14BQ5SR56 506 aa18.55■□□□□ 0.56
CD9-210ENST00000543916 KIAA0825Q8IV33 1275 aa18.55■□□□□ 0.56
CD9-210ENST00000543916 C16orf71Q8IYS4 520 aaPredicted RBP18.55■□□□□ 0.56
CD9-210ENST00000543916 CLASRPQ8N2M8 674 aaKnown RBP18.55■□□□□ 0.56
CD9-210ENST00000543916 TRPM4Q8TD43 1214 aa18.55■□□□□ 0.56
CD9-210ENST00000543916 LRRCC1Q9C099 1032 aa18.55■□□□□ 0.56
CD9-210ENST00000543916 BCL11AQ9H165 835 aa18.55■□□□□ 0.56
CD9-210ENST00000543916 H7C1D1 291 aa18.54■□□□□ 0.56
CD9-210ENST00000543916 SEMA3EO15041 775 aa18.54■□□□□ 0.56
CD9-210ENST00000543916 USP17L8P0C7I0 530 aa18.54■□□□□ 0.56
CD9-210ENST00000543916 ZNF280AP59817 542 aaPredicted RBP18.54■□□□□ 0.56
CD9-210ENST00000543916 SCARF1Q14162 830 aa18.54■□□□□ 0.56
CD9-210ENST00000543916 GRIK5Q16478 980 aa18.54■□□□□ 0.56
CD9-210ENST00000543916 EAPPQ56P03 285 aaPredicted RBP18.54■□□□□ 0.56
CD9-210ENST00000543916 SAMD7Q7Z3H4 446 aa18.54■□□□□ 0.56
CD9-210ENST00000543916 DENND2AQ9ULE3 1009 aa18.54■□□□□ 0.56
CD9-210ENST00000543916 IGHDP01880 384 aa18.53■□□□□ 0.56
CD9-210ENST00000543916 HIRAP54198 1017 aaPredicted RBP18.53■□□□□ 0.56
CD9-210ENST00000543916 TBC1D10BQ4KMP7 808 aaPredicted RBP18.53■□□□□ 0.56
CD9-210ENST00000543916 PI16Q6UXB8 463 aa18.53■□□□□ 0.56
CD9-210ENST00000543916 USP50Q70EL3 339 aaPredicted RBP18.53■□□□□ 0.56
CD9-210ENST00000543916 PNMA8AQ86V59 439 aaPredicted RBP18.53■□□□□ 0.56
CD9-210ENST00000543916 ECM29Q5VYK3 1845 aa18.52■□□□□ 0.56
CD9-210ENST00000543916 F8W031 263 aaPredicted RBP18.52■□□□□ 0.56
CD9-210ENST00000543916 TOMM70O94826 608 aa18.52■□□□□ 0.56
CD9-210ENST00000543916 MCAMP43121 646 aa18.52■□□□□ 0.56
CD9-210ENST00000543916 TTC39AQ5SRH9 613 aa18.52■□□□□ 0.56
CD9-210ENST00000543916 TBC1D22AQ8WUA7 517 aa18.52■□□□□ 0.56
CD9-210ENST00000543916 HMG20BQ9P0W2 317 aa18.52■□□□□ 0.56
CD9-210ENST00000543916 PDS5AQ29RF7 1337 aaKnown RBP18.51■□□□□ 0.55
CD9-210ENST00000543916 IFIT2P09913 472 aaKnown RBP18.51■□□□□ 0.55
CD9-210ENST00000543916 UQCRFS1P1P0C7P4 283 aa18.51■□□□□ 0.55
CD9-210ENST00000543916 KIF4BQ2VIQ3 1234 aa18.51■□□□□ 0.55
CD9-210ENST00000543916 CCDC158Q5M9N0 1113 aa18.51■□□□□ 0.55
CD9-210ENST00000543916 RBM26Q5T8P6 1007 aaKnown RBP18.51■□□□□ 0.55
CD9-210ENST00000543916 WDR66Q8TBY9 1149 aa18.51■□□□□ 0.55
CD9-210ENST00000543916 RWDD1Q9H446 243 aaPredicted RBP18.51■□□□□ 0.55
CD9-210ENST00000543916 MYOZ2Q9NPC6 264 aa18.51■□□□□ 0.55
CD9-210ENST00000543916 MYO5AQ9Y4I1 1855 aaKnown RBP18.51■□□□□ 0.55
CD9-210ENST00000543916 SALL1Q9NSC2 1324 aa18.5■□□□□ 0.55
CD9-210ENST00000543916 LDHDQ86WU2 507 aa18.5■□□□□ 0.55
CD9-210ENST00000543916 OGFOD1Q8N543 542 aa18.5■□□□□ 0.55
CD9-210ENST00000543916 SPATA5Q8NB90 893 aa18.5■□□□□ 0.55
CD9-210ENST00000543916 RBM46Q8TBY0 533 aaKnown RBP18.5■□□□□ 0.55
CD9-210ENST00000543916 GCC1Q96CN9 775 aa18.5■□□□□ 0.55
CD9-210ENST00000543916 ZNF512BQ96KM6 892 aaPredicted RBP18.5■□□□□ 0.55
CD9-210ENST00000543916 MAST2Q6P0Q8 1798 aa18.5■□□□□ 0.55
CD9-210ENST00000543916 SNRKQ9NRH2 765 aa18.49■□□□□ 0.55
CD9-210ENST00000543916 HDAC9Q9UKV0 1011 aa18.49■□□□□ 0.55
CD9-210ENST00000543916 TTF2Q9UNY4 1162 aaKnown RBP18.49■□□□□ 0.55
CD9-210ENST00000543916 CLEC11AQ9Y240 323 aa18.49■□□□□ 0.55
CD9-210ENST00000543916 DOCK2Q92608 1830 aa18.49■□□□□ 0.55
CD9-210ENST00000543916 ASTN2O75129 1339 aaPredicted RBP18.49■□□□□ 0.55
CD9-210ENST00000543916 PRDX5P30044 214 aa18.48■□□□□ 0.55
CD9-210ENST00000543916 CHADLQ6NUI6 762 aa18.48■□□□□ 0.55
CD9-210ENST00000543916 SMC5Q8IY18 1101 aa18.48■□□□□ 0.55
CD9-210ENST00000543916 PCDHAC2Q9Y5I4 1007 aa18.48■□□□□ 0.55
CD9-210ENST00000543916 MMP14P50281 582 aa18.47■□□□□ 0.55
CD9-210ENST00000543916 ANKRD45Q5TZF3 282 aa18.47■□□□□ 0.55
CD9-210ENST00000543916 SMC1BQ8NDV3 1235 aa18.47■□□□□ 0.55
CD9-210ENST00000543916 ZBED3Q96IU2 234 aaPredicted RBP18.47■□□□□ 0.55
CD9-210ENST00000543916 SUGT1Q9Y2Z0 365 aa18.47■□□□□ 0.55
CD9-210ENST00000543916 MYH2Q9UKX2 1941 aa18.47■□□□□ 0.55
CD9-210ENST00000543916 LDHBP07195 334 aaKnown RBP18.46■□□□□ 0.55
CD9-210ENST00000543916 ZAP70P43403 619 aa18.46■□□□□ 0.55
CD9-210ENST00000543916 NBPF9Q3BBW0 867 aa18.46■□□□□ 0.55
CD9-210ENST00000543916 CFAP100Q494V2 611 aa18.46■□□□□ 0.55
CD9-210ENST00000543916 MAP1SQ66K74 1059 aaPredicted RBP18.46■□□□□ 0.55
CD9-210ENST00000543916 TBC1D9Q6ZT07 1266 aa18.46■□□□□ 0.55
CD9-210ENST00000543916 ABCF2Q9UG63 623 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms