RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 SIK1P57059 783 aa16.41■□□□□ 0.22
MSH2-206ENST00000543555 RESTQ13127 1097 aa16.41■□□□□ 0.22
MSH2-206ENST00000543555 ITPK1Q13572 414 aa16.41■□□□□ 0.22
MSH2-206ENST00000543555 H3BQV1 296 aa16.4■□□□□ 0.22
MSH2-206ENST00000543555 FGAP02671 866 aa16.4■□□□□ 0.22
MSH2-206ENST00000543555 IFFO2Q5TF58 517 aa16.4■□□□□ 0.22
MSH2-206ENST00000543555 FBXL16Q8N461 479 aa16.4■□□□□ 0.22
MSH2-206ENST00000543555 CTDNEP1O95476 244 aa16.4■□□□□ 0.22
MSH2-206ENST00000543555 HMGN5P82970 282 aaKnown RBP16.4■□□□□ 0.22
MSH2-206ENST00000543555 CHST3Q7LGC8 479 aa16.4■□□□□ 0.22
MSH2-206ENST00000543555 ZNF274Q96GC6 653 aaPredicted RBP16.4■□□□□ 0.22
MSH2-206ENST00000543555 GPAA1O43292 621 aa16.4■□□□□ 0.22
MSH2-206ENST00000543555 ADD2P35612 726 aa16.4■□□□□ 0.22
MSH2-206ENST00000543555 CRKLP46109 303 aaKnown RBP16.4■□□□□ 0.22
MSH2-206ENST00000543555 TTF1Q15361 905 aaPredicted RBP16.4■□□□□ 0.22
MSH2-206ENST00000543555 UVSSAQ2YD98 709 aa16.4■□□□□ 0.22
MSH2-206ENST00000543555 ZSCAN25Q6NSZ9 544 aa16.4■□□□□ 0.22
MSH2-206ENST00000543555 SPATA32Q96LK8 384 aa16.4■□□□□ 0.22
MSH2-206ENST00000543555 FUCA2Q9BTY2 467 aa16.4■□□□□ 0.22
MSH2-206ENST00000543555 ZSCAN16Q9H4T2 348 aaPredicted RBP16.4■□□□□ 0.22
MSH2-206ENST00000543555 TFIP11Q9UBB9 837 aaKnown RBP16.4■□□□□ 0.22
MSH2-206ENST00000543555 AKAP11Q9UKA4 1901 aa16.4■□□□□ 0.22
MSH2-206ENST00000543555 PTPDC1A2A3K4 754 aa16.39■□□□□ 0.21
MSH2-206ENST00000543555 PDIA3P30101 505 aaKnown RBP16.39■□□□□ 0.21
MSH2-206ENST00000543555 HAND2P61296 217 aa16.39■□□□□ 0.21
MSH2-206ENST00000543555 SUSD4Q5VX71 490 aa16.39■□□□□ 0.21
MSH2-206ENST00000543555 GIMAP6Q6P9H5 292 aa16.39■□□□□ 0.21
MSH2-206ENST00000543555 LEO1Q8WVC0 666 aaPredicted RBP16.39■□□□□ 0.21
MSH2-206ENST00000543555 CCT2P78371 535 aaKnown RBP16.39■□□□□ 0.21
MSH2-206ENST00000543555 CCDC102BQ68D86 513 aa16.39■□□□□ 0.21
MSH2-206ENST00000543555 MYH7P12883 1935 aa16.39■□□□□ 0.21
MSH2-206ENST00000543555 MROH5Q6ZUA9 1318 aa16.39■□□□□ 0.21
MSH2-206ENST00000543555 ARID4AP29374 1257 aaPredicted RBP16.38■□□□□ 0.21
MSH2-206ENST00000543555 PUM3Q15397 648 aaKnown RBP16.38■□□□□ 0.21
MSH2-206ENST00000543555 KIF3AQ9Y496 699 aa16.38■□□□□ 0.21
MSH2-206ENST00000543555 UTRNP46939 3433 aa16.38■□□□□ 0.21
MSH2-206ENST00000543555 SALL1Q9NSC2 1324 aa16.38■□□□□ 0.21
MSH2-206ENST00000543555 PHKA1P46020 1223 aa16.38■□□□□ 0.21
MSH2-206ENST00000543555 EVCP57679 992 aa16.38■□□□□ 0.21
MSH2-206ENST00000543555 NAA16Q6N069 864 aaPredicted RBP16.38■□□□□ 0.21
MSH2-206ENST00000543555 LPIN2Q92539 896 aa16.38■□□□□ 0.21
MSH2-206ENST00000543555 NCOA5Q9HCD5 579 aaKnown RBP16.38■□□□□ 0.21
MSH2-206ENST00000543555 UQCRFS1P1P0C7P4 283 aa16.37■□□□□ 0.21
MSH2-206ENST00000543555 HCLS1P14317 486 aaPredicted RBP16.37■□□□□ 0.21
MSH2-206ENST00000543555 FGFR2P21802 821 aa16.37■□□□□ 0.21
MSH2-206ENST00000543555 SLC9C2Q5TAH2 1124 aa16.37■□□□□ 0.21
MSH2-206ENST00000543555 CHMP4CQ96CF2 233 aa16.37■□□□□ 0.21
MSH2-206ENST00000543555 PIH1D3Q9NQM4 214 aaKnown RBP16.37■□□□□ 0.21
MSH2-206ENST00000543555 NAP1L2Q9ULW6 460 aaPredicted RBP16.37■□□□□ 0.21
MSH2-206ENST00000543555 RREB1Q92766 1687 aa16.37■□□□□ 0.21
MSH2-206ENST00000543555 CAMTA2O94983 1202 aa16.37■□□□□ 0.21
MSH2-206ENST00000543555 LIG1P18858 919 aa16.37■□□□□ 0.21
MSH2-206ENST00000543555 UTP14AQ9BVJ6 771 aaKnown RBP16.37■□□□□ 0.21
MSH2-206ENST00000543555 MSNP26038 577 aaKnown RBP16.37■□□□□ 0.21
MSH2-206ENST00000543555 MB21D2Q8IYB1 491 aaPredicted RBP16.37■□□□□ 0.21
MSH2-206ENST00000543555 NOL7Q9UMY1 257 aaKnown RBP16.37■□□□□ 0.21
MSH2-206ENST00000543555 GOLGA6L4A6NEF3 574 aa16.36■□□□□ 0.21
MSH2-206ENST00000543555 ZNF213O14771 459 aa16.36■□□□□ 0.21
MSH2-206ENST00000543555 UBE3CQ15386 1083 aa16.36■□□□□ 0.21
MSH2-206ENST00000543555 HELBQ8NG08 1087 aaPredicted RBP16.36■□□□□ 0.21
MSH2-206ENST00000543555 CICQ96RK0 1608 aaPredicted RBP16.36■□□□□ 0.21
MSH2-206ENST00000543555 ARAP2Q8WZ64 1704 aa16.36■□□□□ 0.21
MSH2-206ENST00000543555 IDH1O75874 414 aaKnown RBP16.36■□□□□ 0.21
MSH2-206ENST00000543555 MCM5P33992 734 aa16.36■□□□□ 0.21
MSH2-206ENST00000543555 PARP10Q53GL7 1025 aa16.36■□□□□ 0.21
MSH2-206ENST00000543555 NCOA7Q8NI08 942 aa16.36■□□□□ 0.21
MSH2-206ENST00000543555 FAM177BA6PVY3 158 aa16.35■□□□□ 0.21
MSH2-206ENST00000543555 PRC1O43663 620 aa16.35■□□□□ 0.21
MSH2-206ENST00000543555 GPHNQ9NQX3 736 aaPredicted RBP16.35■□□□□ 0.21
MSH2-206ENST00000543555 CCDC39Q9UFE4 941 aa16.35■□□□□ 0.21
MSH2-206ENST00000543555 NUP62CLQ9H1M0 184 aa16.35■□□□□ 0.21
MSH2-206ENST00000543555 CFAP45Q9UL16 551 aa16.35■□□□□ 0.21
MSH2-206ENST00000543555 SLC5A1P13866 664 aa16.35■□□□□ 0.21
MSH2-206ENST00000543555 RALYLQ86SE5 291 aaKnown RBP16.35■□□□□ 0.21
MSH2-206ENST00000543555 PDE6AP16499 860 aa16.34■□□□□ 0.21
MSH2-206ENST00000543555 ANTXR2P58335 489 aa16.34■□□□□ 0.21
MSH2-206ENST00000543555 AMIGO3Q86WK7 504 aa16.34■□□□□ 0.21
MSH2-206ENST00000543555 PGBD1Q96JS3 809 aa16.34■□□□□ 0.21
MSH2-206ENST00000543555 MPHOSPH8Q99549 860 aa16.34■□□□□ 0.21
MSH2-206ENST00000543555 ZNF532Q9HCE3 1301 aa16.34■□□□□ 0.21
MSH2-206ENST00000543555 FOSBP53539 338 aa16.34■□□□□ 0.21
MSH2-206ENST00000543555 LINC00116Q8NCU8 138 aa16.34■□□□□ 0.21
MSH2-206ENST00000543555 WDR19Q8NEZ3 1342 aa16.34■□□□□ 0.21
MSH2-206ENST00000543555 SEC31BQ9NQW1 1179 aa16.34■□□□□ 0.21
MSH2-206ENST00000543555 DACT1Q9NYF0 836 aa16.34■□□□□ 0.21
MSH2-206ENST00000543555 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.34■□□□□ 0.21
MSH2-206ENST00000543555 CARMIL3Q8ND23 1372 aa16.33■□□□□ 0.21
MSH2-206ENST00000543555 ADD1P35611 737 aaKnown RBP16.33■□□□□ 0.21
MSH2-206ENST00000543555 MAP3K11Q16584 847 aa16.33■□□□□ 0.21
MSH2-206ENST00000543555 DDX19AQ9NUU7 478 aaKnown RBP16.33■□□□□ 0.21
MSH2-206ENST00000543555 CCNL1Q9UK58 526 aaPredicted RBP16.33■□□□□ 0.21
MSH2-206ENST00000543555 WWC3Q9ULE0 1092 aa16.33■□□□□ 0.21
MSH2-206ENST00000543555 BRWD3Q6RI45 1802 aa16.33■□□□□ 0.2
MSH2-206ENST00000543555 THSD7AQ9UPZ6 1657 aa16.33■□□□□ 0.2
MSH2-206ENST00000543555 TCRBV5S4A2TA0A5A2 114 aa16.33■□□□□ 0.2
MSH2-206ENST00000543555 NTSR2O95665 410 aa16.33■□□□□ 0.2
MSH2-206ENST00000543555 CCDC192P0DO97 292 aa16.33■□□□□ 0.2
MSH2-206ENST00000543555 CCDC152Q4G0S7 254 aa16.33■□□□□ 0.2
MSH2-206ENST00000543555 LRRC4BQ9NT99 713 aa16.33■□□□□ 0.2
MSH2-206ENST00000543555 USP25Q9UHP3 1055 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms