RNA–Protein interactions for RNA: ENST00000543462.1

VEGFB-204, Transcript of vascular endothelial growth factor B, humanhuman

TSL 2

Gene VEGFB, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-204ENST00000543462 KIF1BPQ96EK5 621 aa12.24□□□□□ -0.45
VEGFB-204ENST00000543462 MXD3Q9BW11 206 aa12.24□□□□□ -0.45
VEGFB-204ENST00000543462 TAF1DQ9H5J8 278 aaPredicted RBP12.24□□□□□ -0.45
VEGFB-204ENST00000543462 TLR7Q9NYK1 1049 aaKnown RBP12.24□□□□□ -0.45
VEGFB-204ENST00000543462 ZBTB12Q9Y330 459 aaPredicted RBP12.24□□□□□ -0.45
VEGFB-204ENST00000543462 GJA3Q9Y6H8 435 aa12.24□□□□□ -0.45
VEGFB-204ENST00000543462 SALL1Q9NSC2 1324 aa12.23□□□□□ -0.45
VEGFB-204ENST00000543462 IQCA1LA6NCM1 817 aa12.23□□□□□ -0.45
VEGFB-204ENST00000543462 SEMA3EO15041 775 aa12.23□□□□□ -0.45
VEGFB-204ENST00000543462 EPS15P42566 896 aa12.23□□□□□ -0.45
VEGFB-204ENST00000543462 GTF2IP78347 998 aa12.23□□□□□ -0.45
VEGFB-204ENST00000543462 IRX6P78412 446 aaPredicted RBP12.23□□□□□ -0.45
VEGFB-204ENST00000543462 CAVIN4Q5BKX8 364 aa12.23□□□□□ -0.45
VEGFB-204ENST00000543462 ZNF512BQ96KM6 892 aaPredicted RBP12.23□□□□□ -0.45
VEGFB-204ENST00000543462 DBNDD2Q9BQY9 259 aa12.23□□□□□ -0.45
VEGFB-204ENST00000543462 RRAGCQ9HB90 399 aa12.23□□□□□ -0.45
VEGFB-204ENST00000543462 HACL1Q9UJ83 578 aa12.23□□□□□ -0.45
VEGFB-204ENST00000543462 PAPPA2Q9BXP8 1791 aa12.23□□□□□ -0.45
VEGFB-204ENST00000543462 SALL3Q9BXA9 1300 aa12.22□□□□□ -0.45
VEGFB-204ENST00000543462 EGFRP00533 1210 aa12.22□□□□□ -0.45
VEGFB-204ENST00000543462 RASGRF1Q13972 1273 aa12.22□□□□□ -0.45
VEGFB-204ENST00000543462 GRIK5Q16478 980 aa12.22□□□□□ -0.45
VEGFB-204ENST00000543462 TTLL5Q6EMB2 1281 aa12.22□□□□□ -0.45
VEGFB-204ENST00000543462 SMC5Q8IY18 1101 aa12.22□□□□□ -0.45
VEGFB-204ENST00000543462 MICALL2Q8IY33 904 aa12.22□□□□□ -0.45
VEGFB-204ENST00000543462 ZBED3Q96IU2 234 aaPredicted RBP12.22□□□□□ -0.45
VEGFB-204ENST00000543462 POTEIP0CG38 1075 aa12.21□□□□□ -0.45
VEGFB-204ENST00000543462 POTEJP0CG39 1038 aa12.21□□□□□ -0.45
VEGFB-204ENST00000543462 EPHX2P34913 555 aa12.21□□□□□ -0.45
VEGFB-204ENST00000543462 HIRAP54198 1017 aaPredicted RBP12.21□□□□□ -0.45
VEGFB-204ENST00000543462 OS9Q13438 667 aaPredicted RBP12.21□□□□□ -0.45
VEGFB-204ENST00000543462 SCARF1Q14162 830 aa12.21□□□□□ -0.45
VEGFB-204ENST00000543462 TRPM4Q8TD43 1214 aa12.21□□□□□ -0.45
VEGFB-204ENST00000543462 IL1RAPL2Q9NP60 686 aa12.21□□□□□ -0.45
VEGFB-204ENST00000543462 ADARB2Q9NS39 739 aaKnown RBP12.21□□□□□ -0.45
VEGFB-204ENST00000543462 IQSEC3Q9UPP2 1182 aaPredicted RBP12.21□□□□□ -0.45
VEGFB-204ENST00000543462 DDX60LQ5H9U9 1706 aaKnown RBP12.2□□□□□ -0.46
VEGFB-204ENST00000543462 AK9Q5TCS8 1911 aa12.2□□□□□ -0.46
VEGFB-204ENST00000543462 G3V3G9 751 aa12.2□□□□□ -0.46
VEGFB-204ENST00000543462 MCAMP43121 646 aa12.2□□□□□ -0.46
VEGFB-204ENST00000543462 MMP14P50281 582 aa12.2□□□□□ -0.46
VEGFB-204ENST00000543462 MFSD14BQ5SR56 506 aa12.2□□□□□ -0.46
VEGFB-204ENST00000543462 DCAF8Q5TAQ9 597 aa12.2□□□□□ -0.46
VEGFB-204ENST00000543462 LRRCC1Q9C099 1032 aa12.2□□□□□ -0.46
VEGFB-204ENST00000543462 PGAP2Q9UHJ9 254 aa12.2□□□□□ -0.46
VEGFB-204ENST00000543462 CNOT7Q9UIV1 285 aaKnown RBP12.2□□□□□ -0.46
VEGFB-204ENST00000543462 JAG2Q9Y219 1238 aa12.2□□□□□ -0.46
VEGFB-204ENST00000543462 IGHDP01880 384 aa12.19□□□□□ -0.46
VEGFB-204ENST00000543462 USP17L8P0C7I0 530 aa12.19□□□□□ -0.46
VEGFB-204ENST00000543462 PI16Q6UXB8 463 aa12.19□□□□□ -0.46
VEGFB-204ENST00000543462 USP50Q70EL3 339 aaPredicted RBP12.19□□□□□ -0.46
VEGFB-204ENST00000543462 AACSQ86V21 672 aa12.19□□□□□ -0.46
VEGFB-204ENST00000543462 VPS37DQ86XT2 251 aa12.19□□□□□ -0.46
VEGFB-204ENST00000543462 MTMR14Q8NCE2 650 aa12.19□□□□□ -0.46
VEGFB-204ENST00000543462 RBM46Q8TBY0 533 aaKnown RBP12.19□□□□□ -0.46
VEGFB-204ENST00000543462 TBC1D22AQ8WUA7 517 aa12.19□□□□□ -0.46
VEGFB-204ENST00000543462 CCDC8Q9H0W5 538 aaPredicted RBP12.19□□□□□ -0.46
VEGFB-204ENST00000543462 HMG20BQ9P0W2 317 aa12.19□□□□□ -0.46
VEGFB-204ENST00000543462 DENND2AQ9ULE3 1009 aa12.19□□□□□ -0.46
VEGFB-204ENST00000543462 SUGT1Q9Y2Z0 365 aa12.19□□□□□ -0.46
VEGFB-204ENST00000543462 LAMB1P07942 1786 aa12.18□□□□□ -0.46
VEGFB-204ENST00000543462 AOX1Q06278 1338 aa12.18□□□□□ -0.46
VEGFB-204ENST00000543462 SMARCA5O60264 1052 aaPredicted RBP12.18□□□□□ -0.46
VEGFB-204ENST00000543462 TOMM70O94826 608 aa12.18□□□□□ -0.46
VEGFB-204ENST00000543462 UQCRFS1P1P0C7P4 283 aa12.18□□□□□ -0.46
VEGFB-204ENST00000543462 LMOD1P29536 600 aaPredicted RBP12.18□□□□□ -0.46
VEGFB-204ENST00000543462 SAMD7Q7Z3H4 446 aa12.18□□□□□ -0.46
VEGFB-204ENST00000543462 LDHDQ86WU2 507 aa12.18□□□□□ -0.46
VEGFB-204ENST00000543462 KIAA0825Q8IV33 1275 aa12.18□□□□□ -0.46
VEGFB-204ENST00000543462 CLASRPQ8N2M8 674 aaKnown RBP12.18□□□□□ -0.46
VEGFB-204ENST00000543462 WDR66Q8TBY9 1149 aa12.18□□□□□ -0.46
VEGFB-204ENST00000543462 ZNF384Q8TF68 577 aa12.18□□□□□ -0.46
VEGFB-204ENST00000543462 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.18□□□□□ -0.46
VEGFB-204ENST00000543462 GCC1Q96CN9 775 aa12.18□□□□□ -0.46
VEGFB-204ENST00000543462 NEUROD6Q96NK8 337 aa12.18□□□□□ -0.46
VEGFB-204ENST00000543462 GNL3LQ9NVN8 582 aaKnown RBP12.18□□□□□ -0.46
VEGFB-204ENST00000543462 OTOFQ9HC10 1997 aa12.18□□□□□ -0.46
VEGFB-204ENST00000543462 RFX7Q2KHR2 1363 aa12.18□□□□□ -0.46
VEGFB-204ENST00000543462 APBB1O00213 710 aa12.17□□□□□ -0.46
VEGFB-204ENST00000543462 CHAF1AQ13111 956 aaPredicted RBP12.17□□□□□ -0.46
VEGFB-204ENST00000543462 KIF4BQ2VIQ3 1234 aa12.17□□□□□ -0.46
VEGFB-204ENST00000543462 PNMA8AQ86V59 439 aaPredicted RBP12.17□□□□□ -0.46
VEGFB-204ENST00000543462 SPATA5Q8NB90 893 aa12.17□□□□□ -0.46
VEGFB-204ENST00000543462 MYOZ2Q9NPC6 264 aa12.17□□□□□ -0.46
VEGFB-204ENST00000543462 SIPA1L1O43166 1804 aa12.16□□□□□ -0.46
VEGFB-204ENST00000543462 GAKO14976 1311 aa12.16□□□□□ -0.46
VEGFB-204ENST00000543462 ASTN2O75129 1339 aaPredicted RBP12.16□□□□□ -0.46
VEGFB-204ENST00000543462 H7C1D1 291 aa12.16□□□□□ -0.46
VEGFB-204ENST00000543462 CENPBP07199 599 aaPredicted RBP12.16□□□□□ -0.46
VEGFB-204ENST00000543462 PRDX5P30044 214 aa12.16□□□□□ -0.46
VEGFB-204ENST00000543462 HDLBPQ00341 1268 aaKnown RBP12.16□□□□□ -0.46
VEGFB-204ENST00000543462 TBC1D10BQ4KMP7 808 aaPredicted RBP12.16□□□□□ -0.46
VEGFB-204ENST00000543462 ZC3H15Q8WU90 426 aaKnown RBP12.16□□□□□ -0.46
VEGFB-204ENST00000543462 FBXW7Q969H0 707 aa12.16□□□□□ -0.46
VEGFB-204ENST00000543462 MRIQ9BWK5 157 aa12.16□□□□□ -0.46
VEGFB-204ENST00000543462 PCDHAC2Q9Y5I4 1007 aa12.16□□□□□ -0.46
VEGFB-204ENST00000543462 PASKQ96RG2 1323 aa12.15□□□□□ -0.46
VEGFB-204ENST00000543462 PITPNM2Q9BZ72 1349 aa12.15□□□□□ -0.46
VEGFB-204ENST00000543462 SPDYE2BA6NHP3 402 aa12.15□□□□□ -0.46
VEGFB-204ENST00000543462 WNT10BO00744 389 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms