RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 PDE8BO95263 885 aa16.45■□□□□ 0.22
TNFRSF1A-215ENST00000543359 HIBADHP31937 336 aaKnown RBP16.45■□□□□ 0.22
TNFRSF1A-215ENST00000543359 INTS3Q68E01 1043 aaKnown RBP16.45■□□□□ 0.22
TNFRSF1A-215ENST00000543359 PAXIP1Q6ZW49 1069 aaPredicted RBP16.45■□□□□ 0.22
TNFRSF1A-215ENST00000543359 JAG2Q9Y219 1238 aa16.45■□□□□ 0.22
TNFRSF1A-215ENST00000543359 PCDHAC2Q9Y5I4 1007 aa16.45■□□□□ 0.22
TNFRSF1A-215ENST00000543359 FAM155AB1AL88 458 aaPredicted RBP16.44■□□□□ 0.22
TNFRSF1A-215ENST00000543359 BCAR3O75815 825 aa16.44■□□□□ 0.22
TNFRSF1A-215ENST00000543359 FGFR2P21802 821 aa16.44■□□□□ 0.22
TNFRSF1A-215ENST00000543359 CTCFP49711 727 aaPredicted RBP16.44■□□□□ 0.22
TNFRSF1A-215ENST00000543359 GRM1Q13255 1194 aa16.44■□□□□ 0.22
TNFRSF1A-215ENST00000543359 METTL24Q5JXM2 366 aa16.44■□□□□ 0.22
TNFRSF1A-215ENST00000543359 ATG9AQ7Z3C6 839 aa16.44■□□□□ 0.22
TNFRSF1A-215ENST00000543359 C2orf69Q8N8R5 385 aa16.44■□□□□ 0.22
TNFRSF1A-215ENST00000543359 MEIS3Q99687 375 aa16.44■□□□□ 0.22
TNFRSF1A-215ENST00000543359 PRDM10Q9NQV6 1147 aa16.44■□□□□ 0.22
TNFRSF1A-215ENST00000543359 TNNQ9UQP3 1299 aa16.44■□□□□ 0.22
TNFRSF1A-215ENST00000543359 AOX1Q06278 1338 aa16.44■□□□□ 0.22
TNFRSF1A-215ENST00000543359 EYA2O00167 538 aa16.43■□□□□ 0.22
TNFRSF1A-215ENST00000543359 UBTFL1P0CB47 393 aaPredicted RBP16.43■□□□□ 0.22
TNFRSF1A-215ENST00000543359 HSPA8P11142 646 aaKnown RBP16.43■□□□□ 0.22
TNFRSF1A-215ENST00000543359 HNRNPUQ00839 825 aaKnown RBP eCLIP16.43■□□□□ 0.22
TNFRSF1A-215ENST00000543359 PRAMEF18Q5VWM3 479 aa16.43■□□□□ 0.22
TNFRSF1A-215ENST00000543359 RGMBQ6NW40 437 aa16.43■□□□□ 0.22
TNFRSF1A-215ENST00000543359 AIDAQ96BJ3 306 aa16.43■□□□□ 0.22
TNFRSF1A-215ENST00000543359 HDAC9Q9UKV0 1011 aa16.43■□□□□ 0.22
TNFRSF1A-215ENST00000543359 LRRFIP2Q9Y608 721 aaKnown RBP16.43■□□□□ 0.22
TNFRSF1A-215ENST00000543359 KIF16BQ96L93 1317 aa16.43■□□□□ 0.22
TNFRSF1A-215ENST00000543359 TRIM27P14373 513 aa16.42■□□□□ 0.22
TNFRSF1A-215ENST00000543359 PRMT6Q96LA8 375 aaPredicted RBP16.42■□□□□ 0.22
TNFRSF1A-215ENST00000543359 F8W031 263 aaPredicted RBP16.41■□□□□ 0.22
TNFRSF1A-215ENST00000543359 LBX1P52954 281 aa16.41■□□□□ 0.22
TNFRSF1A-215ENST00000543359 GRIK5Q16478 980 aa16.41■□□□□ 0.22
TNFRSF1A-215ENST00000543359 MOB2Q70IA6 237 aa16.41■□□□□ 0.22
TNFRSF1A-215ENST00000543359 PAPPA2Q9BXP8 1791 aa16.41■□□□□ 0.22
TNFRSF1A-215ENST00000543359 SPDYE2BA6NHP3 402 aa16.4■□□□□ 0.22
TNFRSF1A-215ENST00000543359 SPDYE6P0CI01 402 aa16.4■□□□□ 0.22
TNFRSF1A-215ENST00000543359 BCAMP50895 628 aa16.4■□□□□ 0.22
TNFRSF1A-215ENST00000543359 FKBP1BP68106 108 aa16.4■□□□□ 0.22
TNFRSF1A-215ENST00000543359 NOGQ13253 232 aa16.4■□□□□ 0.22
TNFRSF1A-215ENST00000543359 DLGAP5Q15398 846 aa16.4■□□□□ 0.22
TNFRSF1A-215ENST00000543359 CFAP100Q494V2 611 aa16.4■□□□□ 0.22
TNFRSF1A-215ENST00000543359 MFSD14BQ5SR56 506 aa16.4■□□□□ 0.22
TNFRSF1A-215ENST00000543359 ATF7IPQ6VMQ6 1270 aa16.4■□□□□ 0.22
TNFRSF1A-215ENST00000543359 FBXO3Q9UK99 471 aa16.4■□□□□ 0.22
TNFRSF1A-215ENST00000543359 ECM29Q5VYK3 1845 aa16.4■□□□□ 0.22
TNFRSF1A-215ENST00000543359 CIAO1O76071 339 aa16.39■□□□□ 0.21
TNFRSF1A-215ENST00000543359 PUM3Q15397 648 aaKnown RBP16.39■□□□□ 0.21
TNFRSF1A-215ENST00000543359 APOBEC3FQ8IUX4 373 aaKnown RBP16.39■□□□□ 0.21
TNFRSF1A-215ENST00000543359 TNS4Q8IZW8 715 aa16.39■□□□□ 0.21
TNFRSF1A-215ENST00000543359 CCDC102AQ96A19 550 aa16.39■□□□□ 0.21
TNFRSF1A-215ENST00000543359 COPRSQ9NQ92 184 aa16.39■□□□□ 0.21
TNFRSF1A-215ENST00000543359 IQSEC3Q9UPP2 1182 aaPredicted RBP16.39■□□□□ 0.21
TNFRSF1A-215ENST00000543359 ARAP2Q8WZ64 1704 aa16.39■□□□□ 0.21
TNFRSF1A-215ENST00000543359 IPO8O15397 1037 aaKnown RBP16.38■□□□□ 0.21
TNFRSF1A-215ENST00000543359 SLC10A3P09131 477 aa16.38■□□□□ 0.21
TNFRSF1A-215ENST00000543359 ZNF157P51786 506 aaPredicted RBP16.38■□□□□ 0.21
TNFRSF1A-215ENST00000543359 DEFB129Q9H1M3 183 aa16.38■□□□□ 0.21
TNFRSF1A-215ENST00000543359 SERPINA10Q9UK55 444 aa16.38■□□□□ 0.21
TNFRSF1A-215ENST00000543359 PA2G4Q9UQ80 394 aaKnown RBP16.38■□□□□ 0.21
TNFRSF1A-215ENST00000543359 UBE2Q2LH0YL09 131 aa16.37■□□□□ 0.21
TNFRSF1A-215ENST00000543359 MTX1Q13505 466 aa16.37■□□□□ 0.21
TNFRSF1A-215ENST00000543359 CAVIN4Q5BKX8 364 aa16.37■□□□□ 0.21
TNFRSF1A-215ENST00000543359 LPIN2Q92539 896 aa16.37■□□□□ 0.21
TNFRSF1A-215ENST00000543359 SIL1Q9H173 461 aa16.37■□□□□ 0.21
TNFRSF1A-215ENST00000543359 TTF2Q9UNY4 1162 aaKnown RBP16.37■□□□□ 0.21
TNFRSF1A-215ENST00000543359 HDAC5Q9UQL6 1122 aa16.37■□□□□ 0.21
TNFRSF1A-215ENST00000543359 ZBED9Q6R2W3 1325 aa16.37■□□□□ 0.21
TNFRSF1A-215ENST00000543359 SSC5DA1L4H1 1573 aa16.36■□□□□ 0.21
TNFRSF1A-215ENST00000543359 GNAI3P08754 354 aa16.36■□□□□ 0.21
TNFRSF1A-215ENST00000543359 KIF23Q02241 960 aaPredicted RBP16.36■□□□□ 0.21
TNFRSF1A-215ENST00000543359 VPS37DQ86XT2 251 aa16.36■□□□□ 0.21
TNFRSF1A-215ENST00000543359 RASAL3Q86YV0 1011 aa16.36■□□□□ 0.21
TNFRSF1A-215ENST00000543359 FRAT1Q92837 279 aaPredicted RBP16.36■□□□□ 0.21
TNFRSF1A-215ENST00000543359 COL1A1P02452 1464 aaPredicted RBP16.35■□□□□ 0.21
TNFRSF1A-215ENST00000543359 CLRN2A0PK11 232 aa16.35■□□□□ 0.21
TNFRSF1A-215ENST00000543359 IFIT1P09914 478 aaKnown RBP16.35■□□□□ 0.21
TNFRSF1A-215ENST00000543359 IL15P40933 162 aaPredicted RBP16.35■□□□□ 0.21
TNFRSF1A-215ENST00000543359 CHAF1AQ13111 956 aaPredicted RBP16.35■□□□□ 0.21
TNFRSF1A-215ENST00000543359 SPDYE2Q495Y8 402 aa16.35■□□□□ 0.21
TNFRSF1A-215ENST00000543359 LDLRAD1Q5T700 205 aa16.35■□□□□ 0.21
TNFRSF1A-215ENST00000543359 CLUAP1Q96AJ1 413 aa16.35■□□□□ 0.21
TNFRSF1A-215ENST00000543359 CSRNP1Q96S65 589 aa16.35■□□□□ 0.21
TNFRSF1A-215ENST00000543359 BEGAINQ9BUH8 593 aa16.35■□□□□ 0.21
TNFRSF1A-215ENST00000543359 TSKSQ9UJT2 592 aa16.35■□□□□ 0.21
TNFRSF1A-215ENST00000543359 CA12O43570 354 aa16.34■□□□□ 0.21
TNFRSF1A-215ENST00000543359 SLC5A1P13866 664 aa16.34■□□□□ 0.21
TNFRSF1A-215ENST00000543359 HDLBPQ00341 1268 aaKnown RBP16.34■□□□□ 0.21
TNFRSF1A-215ENST00000543359 ZKSCAN2Q63HK3 967 aa16.34■□□□□ 0.21
TNFRSF1A-215ENST00000543359 DZIP1LQ8IYY4 767 aaKnown RBP16.34■□□□□ 0.21
TNFRSF1A-215ENST00000543359 TMEM57Q8N5G2 664 aa16.34■□□□□ 0.21
TNFRSF1A-215ENST00000543359 TBC1D22AQ8WUA7 517 aa16.34■□□□□ 0.21
TNFRSF1A-215ENST00000543359 MRIQ9BWK5 157 aa16.34■□□□□ 0.21
TNFRSF1A-215ENST00000543359 CEP126Q9P2H0 1117 aa16.34■□□□□ 0.21
TNFRSF1A-215ENST00000543359 FZD1Q9UP38 647 aa16.34■□□□□ 0.21
TNFRSF1A-215ENST00000543359 ZBTB22O15209 634 aa16.33■□□□□ 0.2
TNFRSF1A-215ENST00000543359 SRGAP3O43295 1099 aa16.33■□□□□ 0.2
TNFRSF1A-215ENST00000543359 CRKP46108 304 aa16.33■□□□□ 0.2
TNFRSF1A-215ENST00000543359 RBM5P52756 815 aaKnown RBP eCLIP16.33■□□□□ 0.2
TNFRSF1A-215ENST00000543359 MAP3K11Q16584 847 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms