RNA–Protein interactions for RNA: ENST00000543185.5

HDAC4-215, Transcript of histone deacetylase 4, humanhuman

TSL 5 BASIC

Gene HDAC4, Length 8,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-215ENST00000543185 C8orf74Q6P047 294 aa21.77■■□□□ 1.08
HDAC4-215ENST00000543185 RNF216Q9NWF9 866 aaPredicted RBP21.77■■□□□ 1.08
HDAC4-215ENST00000543185 GUCY1B3Q02153 619 aa21.77■■□□□ 1.08
HDAC4-215ENST00000543185 WTAPQ15007 396 aa21.77■■□□□ 1.08
HDAC4-215ENST00000543185 PPP2R5EQ16537 467 aa21.77■■□□□ 1.08
HDAC4-215ENST00000543185 SLC26A6Q9BXS9 759 aa21.77■■□□□ 1.08
HDAC4-215ENST00000543185 ZBTB43O43298 467 aa21.77■■□□□ 1.08
HDAC4-215ENST00000543185 GKAP1Q5VSY0 366 aaPredicted RBP21.77■■□□□ 1.08
HDAC4-215ENST00000543185 KCNK9Q9NPC2 374 aa21.77■■□□□ 1.08
HDAC4-215ENST00000543185 HLA-DOAP06340 250 aa21.77■■□□□ 1.08
HDAC4-215ENST00000543185 GTF3C6Q969F1 213 aa21.77■■□□□ 1.07
HDAC4-215ENST00000543185 CALM1P0DP23 149 aa21.76■■□□□ 1.07
HDAC4-215ENST00000543185 CALM2P0DP24 149 aa21.76■■□□□ 1.07
HDAC4-215ENST00000543185 CALM3P0DP25 149 aa21.76■■□□□ 1.07
HDAC4-215ENST00000543185 RPL13P26373 211 aaKnown RBP21.76■■□□□ 1.07
HDAC4-215ENST00000543185 SRGAP1Q7Z6B7 1085 aa21.76■■□□□ 1.07
HDAC4-215ENST00000543185 ESR2Q92731 530 aa21.76■■□□□ 1.07
HDAC4-215ENST00000543185 MAK16Q9BXY0 300 aaKnown RBP21.76■■□□□ 1.07
HDAC4-215ENST00000543185 CFAP43Q8NDM7 1665 aa21.76■■□□□ 1.07
HDAC4-215ENST00000543185 TTC41PQ6P2S7 1318 aa21.76■■□□□ 1.07
HDAC4-215ENST00000543185 PRIM1P49642 420 aaKnown RBP21.76■■□□□ 1.07
HDAC4-215ENST00000543185 CCDC122Q5T0U0 273 aa21.76■■□□□ 1.07
HDAC4-215ENST00000543185 GBP5Q96PP8 586 aa21.76■■□□□ 1.07
HDAC4-215ENST00000543185 CAPZA3Q96KX2 299 aa21.76■■□□□ 1.07
HDAC4-215ENST00000543185 FAN1Q9Y2M0 1017 aa21.76■■□□□ 1.07
HDAC4-215ENST00000543185 HAUS2Q9NVX0 235 aa21.75■■□□□ 1.07
HDAC4-215ENST00000543185 TFIP11Q9UBB9 837 aaKnown RBP21.75■■□□□ 1.07
HDAC4-215ENST00000543185 ZNF569Q5MCW4 686 aa21.75■■□□□ 1.07
HDAC4-215ENST00000543185 SAMM50Q9Y512 469 aa21.75■■□□□ 1.07
HDAC4-215ENST00000543185 ADGBQ8N7X0 1667 aa21.75■■□□□ 1.07
HDAC4-215ENST00000543185 RILPL1Q5EBL4 403 aa21.75■■□□□ 1.07
HDAC4-215ENST00000543185 RTN1Q16799 776 aa21.75■■□□□ 1.07
HDAC4-215ENST00000543185 HVCN1Q96D96 273 aa21.75■■□□□ 1.07
HDAC4-215ENST00000543185 ZNF644Q9H582 1327 aaPredicted RBP21.75■■□□□ 1.07
HDAC4-215ENST00000543185 VIMP08670 466 aaKnown RBP21.75■■□□□ 1.07
HDAC4-215ENST00000543185 DACT1Q9NYF0 836 aa21.75■■□□□ 1.07
HDAC4-215ENST00000543185 RHOXF2BP0C7M4 288 aa21.74■■□□□ 1.07
HDAC4-215ENST00000543185 ASIC1P78348 528 aa21.74■■□□□ 1.07
HDAC4-215ENST00000543185 RHOXF2Q9BQY4 288 aa21.74■■□□□ 1.07
HDAC4-215ENST00000543185 SDCCAG8Q86SQ7 713 aaPredicted RBP21.74■■□□□ 1.07
HDAC4-215ENST00000543185 GNAT2P19087 354 aa21.74■■□□□ 1.07
HDAC4-215ENST00000543185 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.74■■□□□ 1.07
HDAC4-215ENST00000543185 CRNKL1Q9BZJ0 848 aaKnown RBP21.74■■□□□ 1.07
HDAC4-215ENST00000543185 TRIM75PA6NK02 468 aa21.74■■□□□ 1.07
HDAC4-215ENST00000543185 ZPR1O75312 459 aa21.74■■□□□ 1.07
HDAC4-215ENST00000543185 LDHCP07864 332 aa21.74■■□□□ 1.07
HDAC4-215ENST00000543185 LARSQ9P2J5 1176 aaKnown RBP21.74■■□□□ 1.07
HDAC4-215ENST00000543185 DNAJC8O75937 253 aaPredicted RBP21.73■■□□□ 1.07
HDAC4-215ENST00000543185 RBBP5Q15291 538 aaKnown RBP21.73■■□□□ 1.07
HDAC4-215ENST00000543185 DNAJC25Q9H1X3 360 aa21.73■■□□□ 1.07
HDAC4-215ENST00000543185 LZTFL1Q9NQ48 299 aa21.73■■□□□ 1.07
HDAC4-215ENST00000543185 SYCE1Q8N0S2 351 aa21.73■■□□□ 1.07
HDAC4-215ENST00000543185 SMARCA5O60264 1052 aaPredicted RBP21.73■■□□□ 1.07
HDAC4-215ENST00000543185 MGEA5O60502 916 aa21.73■■□□□ 1.07
HDAC4-215ENST00000543185 PPFIA4O75335 1185 aa21.73■■□□□ 1.07
HDAC4-215ENST00000543185 EEF2P13639 858 aaKnown RBP21.73■■□□□ 1.07
HDAC4-215ENST00000543185 PTGS1P23219 599 aa21.73■■□□□ 1.07
HDAC4-215ENST00000543185 RFC1P35251 1148 aaPredicted RBP21.73■■□□□ 1.07
HDAC4-215ENST00000543185 FLIIQ13045 1269 aa21.73■■□□□ 1.07
HDAC4-215ENST00000543185 TSPYL2Q9H2G4 693 aaPredicted RBP21.73■■□□□ 1.07
HDAC4-215ENST00000543185 IFIT1BQ5T764 474 aaKnown RBP21.73■■□□□ 1.07
HDAC4-215ENST00000543185 MED4Q9NPJ6 270 aa21.73■■□□□ 1.07
HDAC4-215ENST00000543185 PPP1R12CQ9BZL4 782 aa21.73■■□□□ 1.07
HDAC4-215ENST00000543185 PARP2Q9UGN5 583 aa21.73■■□□□ 1.07
HDAC4-215ENST00000543185 PHACTR2O75167 634 aa21.72■■□□□ 1.07
HDAC4-215ENST00000543185 POGZQ7Z3K3 1410 aa21.72■■□□□ 1.07
HDAC4-215ENST00000543185 RPRD2Q5VT52 1461 aaKnown RBP21.72■■□□□ 1.07
HDAC4-215ENST00000543185 NOX5Q96PH1 765 aa21.72■■□□□ 1.07
HDAC4-215ENST00000543185 ALG1Q9BT22 464 aa21.72■■□□□ 1.07
HDAC4-215ENST00000543185 NUP58Q9BVL2 599 aa21.72■■□□□ 1.07
HDAC4-215ENST00000543185 FRMD4BQ9Y2L6 1034 aa21.72■■□□□ 1.07
HDAC4-215ENST00000543185 HPDP32754 393 aaPredicted RBP21.72■■□□□ 1.07
HDAC4-215ENST00000543185 PHLDB3Q6NSJ2 640 aa21.72■■□□□ 1.07
HDAC4-215ENST00000543185 STK24Q9Y6E0 443 aa21.72■■□□□ 1.07
HDAC4-215ENST00000543185 DNMBPQ6XZF7 1577 aa21.72■■□□□ 1.07
HDAC4-215ENST00000543185 HS2ST1Q7LGA3 356 aa21.72■■□□□ 1.07
HDAC4-215ENST00000543185 THEMISQ8N1K5 641 aaPredicted RBP21.72■■□□□ 1.07
HDAC4-215ENST00000543185 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.72■■□□□ 1.07
HDAC4-215ENST00000543185 SPINK5Q9NQ38 1064 aaPredicted RBP21.72■■□□□ 1.07
HDAC4-215ENST00000543185 RAB11FIP4Q86YS3 637 aa21.72■■□□□ 1.07
HDAC4-215ENST00000543185 STK10O94804 968 aaKnown RBP21.72■■□□□ 1.07
HDAC4-215ENST00000543185 ATP2A3Q93084 1043 aa21.72■■□□□ 1.07
HDAC4-215ENST00000543185 LMOD1P29536 600 aaPredicted RBP21.72■■□□□ 1.07
HDAC4-215ENST00000543185 PAK2Q13177 524 aa21.72■■□□□ 1.07
HDAC4-215ENST00000543185 CCDC170Q8IYT3 715 aa21.72■■□□□ 1.07
HDAC4-215ENST00000543185 CDC5LQ99459 802 aaKnown RBP21.72■■□□□ 1.07
HDAC4-215ENST00000543185 LRCH2Q5VUJ6 765 aa21.71■■□□□ 1.07
HDAC4-215ENST00000543185 TSPY2A6NKD2 308 aa21.71■■□□□ 1.07
HDAC4-215ENST00000543185 ATP6V1AP38606 617 aa21.71■■□□□ 1.07
HDAC4-215ENST00000543185 PLCB3Q01970 1234 aa21.71■■□□□ 1.07
HDAC4-215ENST00000543185 NAIPQ13075 1403 aa21.71■■□□□ 1.07
HDAC4-215ENST00000543185 FAM169AQ9Y6X4 670 aa21.71■■□□□ 1.07
HDAC4-215ENST00000543185 MYL5Q02045 173 aa21.71■■□□□ 1.07
HDAC4-215ENST00000543185 IQUBQ8NA54 791 aa21.71■■□□□ 1.07
HDAC4-215ENST00000543185 MRVI1Q9Y6F6 885 aa21.71■■□□□ 1.07
HDAC4-215ENST00000543185 LGSNQ5TDP6 509 aa21.71■■□□□ 1.07
HDAC4-215ENST00000543185 AP1ARQ63HQ0 302 aa21.71■■□□□ 1.07
HDAC4-215ENST00000543185 CCT6BQ92526 530 aa21.71■■□□□ 1.07
HDAC4-215ENST00000543185 CRCPO75575 148 aa21.7■■□□□ 1.06
HDAC4-215ENST00000543185 DENND2CQ68D51 928 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms