RNA–Protein interactions for RNA: ENST00000542830.5

LTBR-210, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-210ENST00000542830 THSD7BQ9C0I4 1608 aa21.83■■□□□ 1.08
LTBR-210ENST00000542830 FAM205AQ6ZU69 1335 aa21.82■■□□□ 1.08
LTBR-210ENST00000542830 GYG1P46976 350 aa21.82■■□□□ 1.08
LTBR-210ENST00000542830 CTCFP49711 727 aaPredicted RBP21.82■■□□□ 1.08
LTBR-210ENST00000542830 CAVIN4Q5BKX8 364 aa21.82■■□□□ 1.08
LTBR-210ENST00000542830 VPS37DQ86XT2 251 aa21.82■■□□□ 1.08
LTBR-210ENST00000542830 CERS5Q8N5B7 392 aa21.82■■□□□ 1.08
LTBR-210ENST00000542830 VGLL2Q8N8G2 317 aa21.82■■□□□ 1.08
LTBR-210ENST00000542830 KLHDC4Q8TBB5 520 aa21.82■■□□□ 1.08
LTBR-210ENST00000542830 BEGAINQ9BUH8 593 aa21.82■■□□□ 1.08
LTBR-210ENST00000542830 FBXO3Q9UK99 471 aa21.82■■□□□ 1.08
LTBR-210ENST00000542830 EYA2O00167 538 aa21.81■■□□□ 1.08
LTBR-210ENST00000542830 RFX5P48382 616 aaPredicted RBP21.81■■□□□ 1.08
LTBR-210ENST00000542830 FKBP1BP68106 108 aa21.81■■□□□ 1.08
LTBR-210ENST00000542830 APOBEC3FQ8IUX4 373 aaKnown RBP21.81■■□□□ 1.08
LTBR-210ENST00000542830 MTMR14Q8NCE2 650 aa21.81■■□□□ 1.08
LTBR-210ENST00000542830 GNAI3P08754 354 aa21.8■■□□□ 1.08
LTBR-210ENST00000542830 PTPN12Q05209 780 aaKnown RBP21.8■■□□□ 1.08
LTBR-210ENST00000542830 PUM3Q15397 648 aaKnown RBP21.8■■□□□ 1.08
LTBR-210ENST00000542830 DLGAP5Q15398 846 aa21.8■■□□□ 1.08
LTBR-210ENST00000542830 RGMBQ6NW40 437 aa21.8■■□□□ 1.08
LTBR-210ENST00000542830 ATF7IPQ6VMQ6 1270 aa21.8■■□□□ 1.08
LTBR-210ENST00000542830 FBXO33Q7Z6M2 555 aa21.8■■□□□ 1.08
LTBR-210ENST00000542830 ZBED3Q96IU2 234 aaPredicted RBP21.8■■□□□ 1.08
LTBR-210ENST00000542830 AOC2O75106 756 aa21.79■■□□□ 1.08
LTBR-210ENST00000542830 IFIT1P09914 478 aaKnown RBP21.79■■□□□ 1.08
LTBR-210ENST00000542830 NOGQ13253 232 aa21.79■■□□□ 1.08
LTBR-210ENST00000542830 MEIS3Q99687 375 aa21.79■■□□□ 1.08
LTBR-210ENST00000542830 PRDM10Q9NQV6 1147 aa21.79■■□□□ 1.08
LTBR-210ENST00000542830 LRRFIP2Q9Y608 721 aaKnown RBP21.79■■□□□ 1.08
LTBR-210ENST00000542830 F8W031 263 aaPredicted RBP21.78■■□□□ 1.08
LTBR-210ENST00000542830 BCAR3O75815 825 aa21.78■■□□□ 1.08
LTBR-210ENST00000542830 TRIM27P14373 513 aa21.78■■□□□ 1.08
LTBR-210ENST00000542830 MFSD14BQ5SR56 506 aa21.78■■□□□ 1.08
LTBR-210ENST00000542830 FRAT1Q92837 279 aaPredicted RBP21.78■■□□□ 1.08
LTBR-210ENST00000542830 CCDC102AQ96A19 550 aa21.78■■□□□ 1.08
LTBR-210ENST00000542830 JAG2Q9Y219 1238 aa21.78■■□□□ 1.08
LTBR-210ENST00000542830 ZBED9Q6R2W3 1325 aa21.78■■□□□ 1.08
LTBR-210ENST00000542830 MYO1BO43795 1136 aa21.77■■□□□ 1.08
LTBR-210ENST00000542830 CIAO1O76071 339 aa21.77■■□□□ 1.08
LTBR-210ENST00000542830 NF2P35240 595 aa21.77■■□□□ 1.08
LTBR-210ENST00000542830 FRAT2O75474 233 aaPredicted RBP21.76■■□□□ 1.07
LTBR-210ENST00000542830 SLC5A1P13866 664 aa21.76■■□□□ 1.07
LTBR-210ENST00000542830 FGFR2P21802 821 aa21.76■■□□□ 1.07
LTBR-210ENST00000542830 CFAP100Q494V2 611 aa21.76■■□□□ 1.07
LTBR-210ENST00000542830 TBC1D22AQ8WUA7 517 aa21.76■■□□□ 1.07
LTBR-210ENST00000542830 LPIN2Q92539 896 aa21.76■■□□□ 1.07
LTBR-210ENST00000542830 SCAF8Q9UPN6 1271 aaKnown RBP21.76■■□□□ 1.07
LTBR-210ENST00000542830 PAPPA2Q9BXP8 1791 aa21.76■■□□□ 1.07
LTBR-210ENST00000542830 SPDYE2BA6NHP3 402 aa21.75■■□□□ 1.07
LTBR-210ENST00000542830 CA12O43570 354 aa21.75■■□□□ 1.07
LTBR-210ENST00000542830 SPDYE6P0CI01 402 aa21.75■■□□□ 1.07
LTBR-210ENST00000542830 ZNF157P51786 506 aaPredicted RBP21.75■■□□□ 1.07
LTBR-210ENST00000542830 ZKSCAN2Q63HK3 967 aa21.75■■□□□ 1.07
LTBR-210ENST00000542830 ATG9AQ7Z3C6 839 aa21.75■■□□□ 1.07
LTBR-210ENST00000542830 TNS4Q8IZW8 715 aa21.75■■□□□ 1.07
LTBR-210ENST00000542830 COL1A1P02452 1464 aaPredicted RBP21.75■■□□□ 1.07
LTBR-210ENST00000542830 HSPA8P11142 646 aaKnown RBP21.74■■□□□ 1.07
LTBR-210ENST00000542830 IL15P40933 162 aaPredicted RBP21.74■■□□□ 1.07
LTBR-210ENST00000542830 RBM5P52756 815 aaKnown RBP eCLIP21.74■■□□□ 1.07
LTBR-210ENST00000542830 SIL1Q9H173 461 aa21.74■■□□□ 1.07
LTBR-210ENST00000542830 COPRSQ9NQ92 184 aa21.74■■□□□ 1.07
LTBR-210ENST00000542830 CEP126Q9P2H0 1117 aa21.74■■□□□ 1.07
LTBR-210ENST00000542830 SERPINA10Q9UK55 444 aa21.74■■□□□ 1.07
LTBR-210ENST00000542830 TTF2Q9UNY4 1162 aaKnown RBP21.74■■□□□ 1.07
LTBR-210ENST00000542830 BCAMP50895 628 aa21.73■■□□□ 1.07
LTBR-210ENST00000542830 LBX1P52954 281 aa21.73■■□□□ 1.07
LTBR-210ENST00000542830 CHAF1AQ13111 956 aaPredicted RBP21.73■■□□□ 1.07
LTBR-210ENST00000542830 PPP2R3BQ9Y5P8 575 aa21.73■■□□□ 1.07
LTBR-210ENST00000542830 FAM155AB1AL88 458 aaPredicted RBP21.72■■□□□ 1.07
LTBR-210ENST00000542830 SLC10A3P09131 477 aa21.72■■□□□ 1.07
LTBR-210ENST00000542830 MTX1Q13505 466 aa21.72■■□□□ 1.07
LTBR-210ENST00000542830 PRAMEF18Q5VWM3 479 aa21.72■■□□□ 1.07
LTBR-210ENST00000542830 CLUAP1Q96AJ1 413 aa21.72■■□□□ 1.07
LTBR-210ENST00000542830 PRMT6Q96LA8 375 aaPredicted RBP21.72■■□□□ 1.07
LTBR-210ENST00000542830 IQSEC3Q9UPP2 1182 aaPredicted RBP21.72■■□□□ 1.07
LTBR-210ENST00000542830 GNAI2P04899 355 aa21.71■■□□□ 1.07
LTBR-210ENST00000542830 TTLL12Q14166 644 aaPredicted RBP21.71■■□□□ 1.07
LTBR-210ENST00000542830 DEFB129Q9H1M3 183 aa21.71■■□□□ 1.07
LTBR-210ENST00000542830 SUGT1Q9Y2Z0 365 aa21.71■■□□□ 1.07
LTBR-210ENST00000542830 ARAP2Q8WZ64 1704 aa21.71■■□□□ 1.07
LTBR-210ENST00000542830 SRGAP3O43295 1099 aa21.7■■□□□ 1.06
LTBR-210ENST00000542830 HDLBPQ00341 1268 aaKnown RBP21.7■■□□□ 1.06
LTBR-210ENST00000542830 ATP2B3Q16720 1220 aa21.7■■□□□ 1.06
LTBR-210ENST00000542830 PA2G4Q9UQ80 394 aaKnown RBP21.7■■□□□ 1.06
LTBR-210ENST00000542830 TNNQ9UQP3 1299 aa21.7■■□□□ 1.06
LTBR-210ENST00000542830 PCDHAC2Q9Y5I4 1007 aa21.7■■□□□ 1.06
LTBR-210ENST00000542830 ECM29Q5VYK3 1845 aa21.7■■□□□ 1.06
LTBR-210ENST00000542830 CLRN2A0PK11 232 aa21.69■■□□□ 1.06
LTBR-210ENST00000542830 ARMC9Q7Z3E5 817 aa21.69■■□□□ 1.06
LTBR-210ENST00000542830 REM2Q8IYK8 340 aaPredicted RBP21.69■■□□□ 1.06
LTBR-210ENST00000542830 VEZTQ9HBM0 779 aa21.69■■□□□ 1.06
LTBR-210ENST00000542830 CRKP46108 304 aa21.68■■□□□ 1.06
LTBR-210ENST00000542830 TNFAIP1Q13829 316 aa21.68■■□□□ 1.06
LTBR-210ENST00000542830 MOB2Q70IA6 237 aa21.68■■□□□ 1.06
LTBR-210ENST00000542830 RASAL3Q86YV0 1011 aa21.68■■□□□ 1.06
LTBR-210ENST00000542830 FTSJ3Q8IY81 847 aaKnown RBP21.68■■□□□ 1.06
LTBR-210ENST00000542830 TMEM57Q8N5G2 664 aa21.68■■□□□ 1.06
LTBR-210ENST00000542830 WDR66Q8TBY9 1149 aa21.68■■□□□ 1.06
LTBR-210ENST00000542830 ZIC5Q96T25 663 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms